mRNA_H-paniculata_contig3946.10252.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig3946.10252.1
Unique NamemRNA_H-paniculata_contig3946.10252.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
[Close]
BLAST of mRNA_H-paniculata_contig3946.10252.1 vs. uniprot
Match: D8LJA0_ECTSI (Adenylate kinase isoenzyme 6 homolog n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LJA0_ECTSI)

HSP 1 Score: 320 bits (821), Expect = 7.320e-102
Identity = 153/174 (87.93%), Postives = 164/174 (94.25%), Query Frame = 3 
Query:  114 MGKSLGPNVLVTGTPGTGKTCTSQQIEERTGLNHINVGDVVRLKQCHEGRDESFDTFILDEDKLLDELETQMEEGGNVVDFHSCDLFPEHWFDLVLVLRADTSTLFDRLQARGYNQKKVTENVECEIMQVVLEEAKESYPDEAVHEVPSNNIEELESNVSRVAQWLDAWKSNKS 635
            MG SLGPNVL+TGTPGTGKTCTSQQI ERTGL HINVGDVVRLKQCHEGRDESFDTFILDEDKL D +ETQMEEGGNV+DFHSCD FPEHWFDL+LVLRA+TSTLFDRL+ARGY++KKV ENVECEIMQVVLEEAKE YP+EAVHEVPSN IEELESNVSRVAQWLDAW+SN +
Sbjct:    1 MGGSLGPNVLITGTPGTGKTCTSQQIAERTGLRHINVGDVVRLKQCHEGRDESFDTFILDEDKLCDAMETQMEEGGNVIDFHSCDFFPEHWFDLILVLRAETSTLFDRLKARGYSEKKVGENVECEIMQVVLEEAKEGYPEEAVHEVPSNTIEELESNVSRVAQWLDAWRSNNA 174
[Close]
BLAST of mRNA_H-paniculata_contig3946.10252.1 vs. uniprot
Match: S2J2C6_MUCC1 (Adenylate kinase isoenzyme 6 homolog n=5 Tax=Mucor TaxID=4830 RepID=S2J2C6_MUCC1)

HSP 1 Score: 247 bits (631), Expect = 6.060e-74
Identity = 118/174 (67.82%), Postives = 143/174 (82.18%), Query Frame = 3 
Query:  114 MGKSLGPNVLVTGTPGTGKTCTSQQIEERTGLNHINVGDVVRLKQCHEGRDESFDTFILDEDKLLDELETQMEEGGNVVDFHSCDLFPEHWFDLVLVLRADTSTLFDRLQARGYNQKKVTENVECEIMQVVLEEAKESYPDEAVHEVPSNNIEELESNVSRVAQWLDAWKSNKS 635
            M +SL PN+LVTGTPGTGKT TS+ I E TGL H+NVGD+V+ KQ HEG  E FDT +LDEDKLLDELE  +++GG VVDFH+C++FPE WFDLVLVLRADTS+L+DR+  RGYN++K+ EN+ECEIMQVVLE A ESY  E V E+PSN ++++ESNV RV QWLDAWK N S
Sbjct:    1 MDRSL-PNILVTGTPGTGKTTTSEMIAEATGLEHVNVGDIVKSKQLHEGYLEEFDTHVLDEDKLLDELEEMLKDGGKVVDFHTCEIFPERWFDLVLVLRADTSSLYDRMVKRGYNKRKIDENMECEIMQVVLETAHESYAPEIVVELPSNTVDDMESNVDRVKQWLDAWKINNS 173
[Close]
BLAST of mRNA_H-paniculata_contig3946.10252.1 vs. uniprot
Match: A0A8H7PXT1_MORIS (Adenylate kinase isoenzyme 6 homolog n=1 Tax=Mortierella isabellina TaxID=91625 RepID=A0A8H7PXT1_MORIS)

HSP 1 Score: 244 bits (624), Expect = 9.430e-73
Identity = 118/181 (65.19%), Postives = 149/181 (82.32%), Query Frame = 3 
Query:   90 SDKEAG-PQMGKSLGPNVLVTGTPGTGKTCTSQQIEERTGLNHINVGDVVRLKQCHEGRDESFDTFILDEDKLLDELETQMEEGGNVVDFHSCDLFPEHWFDLVLVLRADTSTLFDRLQARGYNQKKVTENVECEIMQVVLEEAKESYPDEAVHEVPSNNIEELESNVSRVAQWLDAWKSN 629
            SD E+  PQ+ + + PN+LVTGTPGTGKT TS+ I + TGL+H+NVGD+V+ KQ HEG  E FDT +LDEDKL+DELE  M EGG +VDFHSC +FPE WFDLVLVLRADT+ L+ R++ R YNQ+K+TEN+ECEIMQVVLEEA+E Y +E V E+PSN+I+E+ESNV RV QW+DA+K+N
Sbjct:    5 SDSESAVPQVDRKV-PNILVTGTPGTGKTTTSELIAQATGLSHVNVGDLVKEKQLHEGYLEEFDTHVLDEDKLIDELEDIMSEGGKIVDFHSCGIFPERWFDLVLVLRADTNVLYPRMENRNYNQRKITENIECEIMQVVLEEARECYAEEIVIELPSNDIDEMESNVERVRQWVDAYKAN 184
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BLAST of mRNA_H-paniculata_contig3946.10252.1 vs. uniprot
Match: A0A835YQ97_9STRA (Adenylate kinase isoenzyme 6 homolog n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YQ97_9STRA)

HSP 1 Score: 243 bits (619), Expect = 3.350e-72
Identity = 113/172 (65.70%), Postives = 137/172 (79.65%), Query Frame = 3 
Query:  114 MGKSLGPNVLVTGTPGTGKTCTSQQIEERTGLNHINVGDVVRLKQCHEGRDESFDTFILDEDKLLDELETQMEEGGNVVDFHSCDLFPEHWFDLVLVLRADTSTLFDRLQARGYNQKKVTENVECEIMQVVLEEAKESYPDEAVHEVPSNNIEELESNVSRVAQWLDAWKSN 629
            MG   GPN+LVTGTPGTGKTCT   I E TGL H++VG VVR +QCHEGRD  FD F+LDEDKL D L  +   GG V+DFHSCD FPE WFDLVLVLRADT+TLFDRL+ARGY++KK+ EN++CEIMQVVLEEA E++P   +HE+ SN +EE+E+NV RV QWL  W+++
Sbjct:    1 MGGPKGPNILVTGTPGTGKTCTCAAIAEATGLTHVDVGAVVRAEQCHEGRDAEFDAFVLDEDKLCDALAPRAAAGGCVLDFHSCDFFPEDWFDLVLVLRADTATLFDRLKARGYHEKKLQENMQCEIMQVVLEEAHEAFPAPIIHELQSNTVEEMEANVDRVKQWLQQWRAD 172
[Close]
BLAST of mRNA_H-paniculata_contig3946.10252.1 vs. uniprot
Match: A0A068RTQ9_9FUNG (Adenylate kinase isoenzyme 6 homolog n=2 Tax=Lichtheimia TaxID=688353 RepID=A0A068RTQ9_9FUNG)

HSP 1 Score: 243 bits (620), Expect = 3.710e-72
Identity = 116/178 (65.17%), Postives = 143/178 (80.34%), Query Frame = 3 
Query:   90 SDKEAGPQMGKSLGPNVLVTGTPGTGKTCTSQQIEERTGLNHINVGDVVRLKQCHEGRDESFDTFILDEDKLLDELETQMEEGGNVVDFHSCDLFPEHWFDLVLVLRADTSTLFDRLQARGYNQKKVTENVECEIMQVVLEEAKESYPDEAVHEVPSNNIEELESNVSRVAQWLDAWK 623
            SD  +   M + L PN+LVTGTPGTGKT TS+ I   TGL HINVG++V+ KQ HEG    +DT ILDEDKL+DE+E  M+EGG VVDFH+C++FPE WFDLVLVLRADTS L+DR++ RGYNQ+K+ EN+ECEIMQVVLE A+ESY  E V E+PSNN++++ESNV RV QWL+AWK
Sbjct:    6 SDARSIASMDRDL-PNILVTGTPGTGKTTTSEAIANATGLQHINVGELVKRKQLHEGYLAEYDTHILDEDKLIDEMEDMMQEGGKVVDFHTCEIFPERWFDLVLVLRADTSPLYDRMEKRGYNQRKLQENIECEIMQVVLESARESYAQEIVVELPSNNVDDMESNVDRVKQWLEAWK 182
[Close]
BLAST of mRNA_H-paniculata_contig3946.10252.1 vs. uniprot
Match: A0A8H7SFE7_9FUNG (Adenylate kinase isoenzyme 6 homolog n=2 Tax=Mucoraceae TaxID=34489 RepID=A0A8H7SFE7_9FUNG)

HSP 1 Score: 239 bits (611), Expect = 4.850e-71
Identity = 115/174 (66.09%), Postives = 140/174 (80.46%), Query Frame = 3 
Query:  114 MGKSLGPNVLVTGTPGTGKTCTSQQIEERTGLNHINVGDVVRLKQCHEGRDESFDTFILDEDKLLDELETQMEEGGNVVDFHSCDLFPEHWFDLVLVLRADTSTLFDRLQARGYNQKKVTENVECEIMQVVLEEAKESYPDEAVHEVPSNNIEELESNVSRVAQWLDAWKSNKS 635
            M +SL PN+LVTGTPGTGKT TS+ I E TGL H+NVG++V+ KQ HEG  E FDT +LDEDKLLDELE  ++EGG +VDFH+C++FPE WFDLVLVLR DT+ L+DR+  RGYN++K+ EN+ECEIMQVVLE A ESY  E V E+PSN I+++ESN  RV QWLDAWK N S
Sbjct:    1 MSRSL-PNILVTGTPGTGKTTTSEMIAEVTGLEHVNVGELVKQKQLHEGYLEEFDTHVLDEDKLLDELEEILKEGGKIVDFHTCEIFPERWFDLVLVLRTDTAGLYDRMTKRGYNKRKIDENMECEIMQVVLETAHESYAPEIVVELPSNTIDDMESNADRVKQWLDAWKVNNS 173
[Close]
BLAST of mRNA_H-paniculata_contig3946.10252.1 vs. uniprot
Match: A0A2G4SWN2_RHIZD (Adenylate kinase isoenzyme 6 homolog n=5 Tax=Rhizopus TaxID=4842 RepID=A0A2G4SWN2_RHIZD)

HSP 1 Score: 239 bits (610), Expect = 6.770e-71
Identity = 113/174 (64.94%), Postives = 141/174 (81.03%), Query Frame = 3 
Query:  114 MGKSLGPNVLVTGTPGTGKTCTSQQIEERTGLNHINVGDVVRLKQCHEGRDESFDTFILDEDKLLDELETQMEEGGNVVDFHSCDLFPEHWFDLVLVLRADTSTLFDRLQARGYNQKKVTENVECEIMQVVLEEAKESYPDEAVHEVPSNNIEELESNVSRVAQWLDAWKSNKS 635
            M +SL PN+LVTGTPGTGKT TS+ I E TGL H+NVGD+V+ KQ HEG  E FDT +LDED+LLD+LE  +++GG VVDFH+CD+FPE WFDLVLVLR DT+ L+DR+  RGYN++K+ EN+ECEIMQVVLE A ESY  E V E+PSN+++++ESNV RV  WL+AWK N S
Sbjct:    1 MARSL-PNILVTGTPGTGKTTTSEMIAEATGLEHVNVGDIVKTKQYHEGYLEEFDTHVLDEDRLLDDLEEIVKDGGKVVDFHTCDIFPERWFDLVLVLRTDTANLYDRMVKRGYNKRKIDENMECEIMQVVLETAHESYAPEIVVELPSNSVDDMESNVDRVKLWLEAWKKNNS 173
[Close]
BLAST of mRNA_H-paniculata_contig3946.10252.1 vs. uniprot
Match: A0A8H7PYZ3_9FUNG (Adenylate kinase isoenzyme 6 homolog n=1 Tax=Umbelopsis vinacea TaxID=44442 RepID=A0A8H7PYZ3_9FUNG)

HSP 1 Score: 239 bits (610), Expect = 1.010e-70
Identity = 112/166 (67.47%), Postives = 138/166 (83.13%), Query Frame = 3 
Query:  132 PNVLVTGTPGTGKTCTSQQIEERTGLNHINVGDVVRLKQCHEGRDESFDTFILDEDKLLDELETQMEEGGNVVDFHSCDLFPEHWFDLVLVLRADTSTLFDRLQARGYNQKKVTENVECEIMQVVLEEAKESYPDEAVHEVPSNNIEELESNVSRVAQWLDAWKSN 629
            PN+LVTGTPGTGKT TS+ I   TGL H+NVGD+V+ KQ HEG  E FDT ILDEDKL+DELE  MEEGG +VDFHSC +FPE WFDLVLVLRA+T+ L+ R++ R YNQ+K+TEN+ECEIMQVVL+EA+ESY +E V E+PSN+I ++ESNV RV QW+D +K+N
Sbjct:   19 PNILVTGTPGTGKTTTSEMIAGATGLTHVNVGDLVKQKQLHEGYLEEFDTHILDEDKLIDELEEIMEEGGKIVDFHSCGIFPERWFDLVLVLRAETNVLYPRMEKRNYNQRKITENIECEIMQVVLDEARESYAEEIVIELPSNDIHDMESNVERVQQWVDIYKAN 184
[Close]
BLAST of mRNA_H-paniculata_contig3946.10252.1 vs. uniprot
Match: A0A8H7EPR1_9FUNG (Adenylate kinase isoenzyme 6 homolog n=1 Tax=Apophysomyces ossiformis TaxID=679940 RepID=A0A8H7EPR1_9FUNG)

HSP 1 Score: 238 bits (606), Expect = 3.710e-70
Identity = 111/165 (67.27%), Postives = 138/165 (83.64%), Query Frame = 3 
Query:  132 PNVLVTGTPGTGKTCTSQQIEERTGLNHINVGDVVRLKQCHEGRDESFDTFILDEDKLLDELETQMEEGGNVVDFHSCDLFPEHWFDLVLVLRADTSTLFDRLQARGYNQKKVTENVECEIMQVVLEEAKESYPDEAVHEVPSNNIEELESNVSRVAQWLDAWKS 626
            PN+LVTGTPGTGKT TS+ I + TGL H+NVGD+VR KQ HEG  E FDT ILDEDKL+DELE  M+EGG +VDFH+C++FPE WFDLVLVLRADT TL+DR++ RGYNQ+K+ EN+ECEIMQVVLEEA+E+Y  E V E+ SN  +++E+NV RV QWL+A+K+
Sbjct:   17 PNILVTGTPGTGKTTTSEMIAQVTGLQHVNVGDLVRTKQLHEGYLEEFDTHILDEDKLIDELEDTMKEGGKIVDFHTCEIFPERWFDLVLVLRADTRTLYDRMEKRGYNQRKIEENMECEIMQVVLEEAREAYAPEIVVELASNTTDDMENNVERVKQWLEAYKA 181
[Close]
BLAST of mRNA_H-paniculata_contig3946.10252.1 vs. uniprot
Match: A0A1X2HSK2_SYNRA (Adenylate kinase isoenzyme 6 homolog n=1 Tax=Syncephalastrum racemosum TaxID=13706 RepID=A0A1X2HSK2_SYNRA)

HSP 1 Score: 235 bits (600), Expect = 2.830e-69
Identity = 110/165 (66.67%), Postives = 136/165 (82.42%), Query Frame = 3 
Query:  132 PNVLVTGTPGTGKTCTSQQIEERTGLNHINVGDVVRLKQCHEGRDESFDTFILDEDKLLDELETQMEEGGNVVDFHSCDLFPEHWFDLVLVLRADTSTLFDRLQARGYNQKKVTENVECEIMQVVLEEAKESYPDEAVHEVPSNNIEELESNVSRVAQWLDAWKS 626
            PN+LVTGTPGTGKT TS+ I   TGL H+NVG++V+ KQ HEG  E FDT ILDEDKLLDELE  ++EGG VVDFH+C++FPE WFDLVLVLR DT+ L+DR++ RGYNQ+K+ EN+ECEIMQVVLE A+ESY  E V E+PSN  +++ESNV RV QWL+A+K+
Sbjct:   19 PNILVTGTPGTGKTTTSEMIANATGLEHVNVGEIVKAKQLHEGYLEEFDTHILDEDKLLDELEDVLKEGGKVVDFHTCEIFPERWFDLVLVLRTDTAPLYDRMEKRGYNQRKMQENIECEIMQVVLEAARESYAPEIVVELPSNTTDDIESNVERVQQWLEAYKA 183
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig3946.10252.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LJA0_ECTSI7.320e-10287.93Adenylate kinase isoenzyme 6 homolog n=2 Tax=Ectoc... [more]
S2J2C6_MUCC16.060e-7467.82Adenylate kinase isoenzyme 6 homolog n=5 Tax=Mucor... [more]
A0A8H7PXT1_MORIS9.430e-7365.19Adenylate kinase isoenzyme 6 homolog n=1 Tax=Morti... [more]
A0A835YQ97_9STRA3.350e-7265.70Adenylate kinase isoenzyme 6 homolog n=1 Tax=Tribo... [more]
A0A068RTQ9_9FUNG3.710e-7265.17Adenylate kinase isoenzyme 6 homolog n=2 Tax=Licht... [more]
A0A8H7SFE7_9FUNG4.850e-7166.09Adenylate kinase isoenzyme 6 homolog n=2 Tax=Mucor... [more]
A0A2G4SWN2_RHIZD6.770e-7164.94Adenylate kinase isoenzyme 6 homolog n=5 Tax=Rhizo... [more]
A0A8H7PYZ3_9FUNG1.010e-7067.47Adenylate kinase isoenzyme 6 homolog n=1 Tax=Umbel... [more]
A0A8H7EPR1_9FUNG3.710e-7067.27Adenylate kinase isoenzyme 6 homolog n=1 Tax=Apoph... [more]
A0A1X2HSK2_SYNRA2.830e-6966.67Adenylate kinase isoenzyme 6 homolog n=1 Tax=Synce... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig3946contigH-paniculata_contig3946:4664..9806 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score320.5
Seed ortholog evalue5e-85
Seed eggNOG ortholog2880.D8LJA0
Preferred nameFAP7
KEGG rclassRC00002
KEGG koko:K18532
KEGG ReactionR00127,R01547
KEGG Pathwayko00230,ko01100,ko01110,ko01130,ko03008,map00230,map01100,map01110,map01130,map03008
KEGG ModuleM00049
Hectar predicted targeting categoryother localisation
GOsGO:0000166,GO:0000462,GO:0003674,GO:0003824,GO:0004017,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005737,GO:0005829,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0006950,GO:0006979,GO:0008144,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009123,GO:0009165,GO:0009987,GO:0010467,GO:0010468,GO:0010494,GO:0015030,GO:0015949,GO:0016070,GO:0016072,GO:0016301,GO:0016310,GO:0016462,GO:0016604,GO:0016740,GO:0016772,GO:0016776,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0018130,GO:0019205,GO:0019222,GO:0019438,GO:0019637,GO:0022613,GO:0030490,GO:0030554,GO:0031974,GO:0031981,GO:0032553,GO:0032555,GO:0032559,GO:0032991,GO:0033554,GO:0034470,GO:0034599,GO:0034641,GO:0034654,GO:0034660,GO:0035639,GO:0035770,GO:0036094,GO:0036166,GO:0036464,GO:0042221,GO:0042254,GO:0042274,GO:0043167,GO:0043168,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044446,GO:0044451,GO:0044464,GO:0046483,GO:0046940,GO:0050145,GO:0050789,GO:0050896,GO:0051716,GO:0055086,GO:0060255,GO:0065007,GO:0070013,GO:0070887,GO:0071704,GO:0071840,GO:0090304,GO:0090407,GO:0097159,GO:0097367,GO:1901265,GO:1901293,GO:1901360,GO:1901362,GO:1901363,GO:1901576,GO:1990904
EggNOG free text desc.adenylate kinase activity
EggNOG OGsCOG1936@1,KOG3347@2759
Ec32 ortholog descriptionP-loop containing nucleoside triphosphate hydrolase
Ec32 orthologEc-02_005300.1
EC2.7.4.3
COG Functional cat.F
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko03009
Exons6
Model size2376
Cds size531
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig3946.10252.1prot_H-paniculata_contig3946.10252.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig3946 6396..9693 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930209.2305653-UTR-H-paniculata_contig3946:4663..63951622930209.2305653-UTR-H-paniculata_contig3946:4663..6395Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig3946 4664..6395 -
1691481191.801661-UTR-H-paniculata_contig3946:4663..63951691481191.801661-UTR-H-paniculata_contig3946:4663..6395Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig3946 4664..6395 -
1622930209.362846-UTR-H-paniculata_contig3946:9693..98061622930209.362846-UTR-H-paniculata_contig3946:9693..9806Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig3946 9694..9806 -
1691481191.8821692-UTR-H-paniculata_contig3946:9693..98061691481191.8821692-UTR-H-paniculata_contig3946:9693..9806Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig3946 9694..9806 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930209.252939-CDS-H-paniculata_contig3946:6395..65911622930209.252939-CDS-H-paniculata_contig3946:6395..6591Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig3946 6396..6591 -
1691481191.8168287-CDS-H-paniculata_contig3946:6395..65911691481191.8168287-CDS-H-paniculata_contig3946:6395..6591Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig3946 6396..6591 -
1622930209.2672834-CDS-H-paniculata_contig3946:6823..68861622930209.2672834-CDS-H-paniculata_contig3946:6823..6886Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig3946 6824..6886 -
1691481191.8264098-CDS-H-paniculata_contig3946:6823..68861691481191.8264098-CDS-H-paniculata_contig3946:6823..6886Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig3946 6824..6886 -
1622930209.2834318-CDS-H-paniculata_contig3946:7326..74091622930209.2834318-CDS-H-paniculata_contig3946:7326..7409Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig3946 7327..7409 -
1691481191.8362484-CDS-H-paniculata_contig3946:7326..74091691481191.8362484-CDS-H-paniculata_contig3946:7326..7409Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig3946 7327..7409 -
1622930209.3060627-CDS-H-paniculata_contig3946:7859..79281622930209.3060627-CDS-H-paniculata_contig3946:7859..7928Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig3946 7860..7928 -
1691481191.84799-CDS-H-paniculata_contig3946:7859..79281691481191.84799-CDS-H-paniculata_contig3946:7859..7928Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig3946 7860..7928 -
1622930209.3219366-CDS-H-paniculata_contig3946:9162..92011622930209.3219366-CDS-H-paniculata_contig3946:9162..9201Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig3946 9163..9201 -
1691481191.8581262-CDS-H-paniculata_contig3946:9162..92011691481191.8581262-CDS-H-paniculata_contig3946:9162..9201Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig3946 9163..9201 -
1622930209.3407385-CDS-H-paniculata_contig3946:9612..96931622930209.3407385-CDS-H-paniculata_contig3946:9612..9693Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig3946 9613..9693 -
1691481191.8715727-CDS-H-paniculata_contig3946:9612..96931691481191.8715727-CDS-H-paniculata_contig3946:9612..9693Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig3946 9613..9693 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig3946.10252.1

>prot_H-paniculata_contig3946.10252.1 ID=prot_H-paniculata_contig3946.10252.1|Name=mRNA_H-paniculata_contig3946.10252.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=177bp
MGKSLGPNVLVTGTPGTGKTCTSQQIEERTGLNHINVGDVVRLKQCHEGR
DESFDTFILDEDKLLDELETQMEEGGNVVDFHSCDLFPEHWFDLVLVLRA
DTSTLFDRLQARGYNQKKVTENVECEIMQVVLEEAKESYPDEAVHEVPSN
NIEELESNVSRVAQWLDAWKSNKSGS*
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mRNA from alignment at H-paniculata_contig3946:4664..9806-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig3946.10252.1 ID=mRNA_H-paniculata_contig3946.10252.1|Name=mRNA_H-paniculata_contig3946.10252.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=5143bp|location=Sequence derived from alignment at H-paniculata_contig3946:4664..9806- (Halopteris paniculata Hal_grac_a_UBK monoicous)
GTCCTTTCAACTTGTGAAGGAAACGATTATGCTGTCTGTGCTTGACAACA
AACAGTCACGAGCTCAGTTTAATAGGTTGCGCAACAGGTAGTGATAAAGA
GGCCGGACCTCAGATGGGAAAATCTCTGGGACCAAATGTTTTGGTTACGG
GAACGCCTGGCACAGGAAAGACCTGCACATCGCAGCAGATCGAGGTGAGA
ATCCTTAACCACGGCGCCCGATGTAACTGCCGCGGAAGCGTGCTCGGCAG
CGACCCCAAGACCTGATTGGCATAGAACAGACACGCCAGCGAGAAGAATA
CAGTGCTGTTCTCTTCCTATGTACTATTCTGCGCGTGTCAAGTGAGGTAT
GCTGCCCCCTTTTCTAATGAACGCGCTTATTGGTCATGGTTCATTTCGGA
ACACTTTATTGTCTTTATTCGATTATATTCTTAAGTAAGTGTTGGTGGCT
TGAGGCCGTCCCTTCCACAGCGACCAATGAGTAATTCGCAGTGTTATTTG
GGCCATGTTCTCTGGCGGACGTATGTATCGCGCCGCACGTATTCAACTGC
TATCTTTACATCTGCTCTCCCACCCCCCGCCCCGCCCCCCGATACTGGTG
CGCAGGAAAGAACGGGACTGAACCACATTAACGTCGGCGATGTGGTGAGA
TTCGTCATAATACGGTAATATATGTACTCAAAGTTTCTGCGCTTGGCTGA
TGTTTTGAGTCTGTTTGGCAGCAACGCCGCTGAAAAGGAAATCCTGATTC
TTGTTGACGGAAGACTTCCAATTTTATGGTGGTATCCGTGAGATCATGGC
GTTCTGCGCAGAAAAGAAACCAAATCAATACTGAACCGAGCTGTCATATG
GACGCTGAGGGAACCAGGAAATATGCGGCATAATGTGTAGGTGCCTATGT
TTTTGGCATTGCATTTGCAAGCTGCCCCTCTTGCAGAACAATCTGTAAGC
ATCCTACGCCTTTCCAACATACAAACATGACAAGACATACACAGGCAGGA
TGAGACACGTGTATGGCGCCCACTACCGCCTGTAGAGTATGTTCATGGTC
CCTTGCCACAACTGAACACTCAGCCGTCATCCATTGAATAAGTCTGTAGA
GATTGTTCAGATACATTTTGACCATCACGGTAATATAATACACGAAGTAC
TCCGGGTCATGTGCGACTCGCTTCACAGAGAAATAATCGAGGCGAAATCA
TTGTACAATGTATCGACGTTTCGTTGCGTGAGCTGGGCGAGCTAGAACAT
GAACAGAGGAGTGCCGTACCCATCGCGGTATCAGCTTTGGTGCAGGGTTG
TGCCAACGAGAGATGATTTTCGAACATCACAGCACATCTGGCCGGTACCA
GAGCTGGCGCAGCATGATGTCACAGTCCACATCTGACGCTCCCAGTTGGT
GTGGCTCCCACGGCGGAGTGTCGTTATACTGTGCTGTAGTTCTCCTCGAC
TGTTGACCTGCGACACGATTTTTGCGGGGGAGCTCTAGGTTGAACAGATA
CGGCACCGAACCCAAAAAATTGAATTACATGCGGCACCTGGAGCCGTGTG
AGGTCAGGAAACAAAAAATTACGTGACCTCAGTGTGGCCAAAAACCGACC
ACATAAAAGTTACTGTCCAGGACCTGCTAGAAATGCCGCAGATGTAATTG
TAGCTTGTATGCTGCGATATGTAATCTCGAGATGCAAGTACTCGGTGCGA
CTCTGTCTTCAGTCACGTGCATCCAACCGTAGCTTCGAGGATATGTAAAA
TCCCCATAATTTACGTCCCCACTCCTGTACAGAAAAAAAGCTTCCCTAGC
TACTGCAACTTTGGTCCGTTGAGGTTTTGACTTGTTCTTGACGTGGTTTG
CACTCAACTGGTTTCTCGTTCTGTATAGGTGCGATTGAAGCAGTGTCATG
AGGGACGGGACGAGTCGTTCGACACTTTCATACTAGACGAGGATAAGGTA
CGTTTATTGTCCAAACAACTATATTACCTCGTCACATCAAGCATGCTAGG
TGTCGGGAGAACGATTGGTCTGTTGGTGCTATTTTTCAAGGCCGTCGTCA
TATATCCAGCGTTAGGTGTGTCTTTTGCAAGCGCGCTTCTTCAGTCGGGT
TTCTGTGTCCGTTATGTGACACTGTGCCATGTGACCACTGAACTTGAAGA
GTTACAGTAAAGCTTTACTCGCTCAGTTGTGCTGCTGTCGTAGCTTTATG
GCGTATCTTTGTCCGACCTCGACACAAGGCTGCAGCAATGGCGCCGATAT
CGGCCTACTGCGCAGTATTTGACACACTCAGAGTGTGTTCTCGGTATGCC
TATCACGCCCCCCCCCAAATGGCGAGTTCCCTAATGTTGTATTCGCACCA
TGTGTACGTGTTGCTTGTGAATGCTTCCTCGTTTGTGTTTGGACCAGTTG
TTAGACGAGCTCGAGACGCAGATGGAAGAGGGTGGAAATGTTGTGGACTT
TCACTCTTGTGACCTATTCCCGGAGCACTGGTGAGTGATAAACCTCCTGG
GTATTTGATCAGGGGCCAGTGCGCCCCAACGTCAACTATAGTGTAGTTTG
CAGAAACACCGTTCGCCCGAATTGGGAACAAGAATCGATCGGAGTCAGGG
ACCAAACGGTGGTGTAGTCGTAATAGTAGTTGTTGCTTGTTGTTGTTATT
GGTGGTGGTAGCGGTAGCGGTGGGTGGTGCCATTGTATTGCCAGATTAAC
GTCTAATTTTTATTCGATGCATCCCTCGTTTATGTAGTGTATGACATACC
GTACCAACGTCTCGAGCCTCGGGTAGTCCTCACCTACTCTTCCGCGGTCC
GATTTGGCATCTTTGTTTTTCCCGCTGTCACCTGATACTAAATAGTGTGT
TAACTCGTCTCATACCGAGGACAAACAGCTTTTCTTATGATCATATATTT
GCTTTTTATCGTTATGGCAGGTTTGACTTAGTTCTTGTGCTGAGGGCCGA
CACAAGCACTCTGTTCGACAGGTTACAGGCCAGGTGCGCACTACATATGC
TGTAAATGCAGTTACAGTATTTGGGTCGCAGTCTTTTTGGAGGATGCAGT
CCTCGGATTGCGAAGATCGTACGCTGTTCGCACGCTGTTCGTATCTTGTT
CGCACGCGACATCGGCGTGCACACCTGCAATACTTTGAAACGTGTGACAT
GCTTACACAACCCCTCTGCGTCATGTACTTTTTATGTATTCTCGCCCATG
ACATTGGGTCTCAAGGGGGTACAACCAAAAGAAGGTGACGGAAAACGTCG
AGTGCGAGATCATGCAGGTGGTCTTGGAAGAGGCAAAGGAGTCATATCCC
GACGAAGCTGTGCACGAGGTCCCAAGCAATAACATCGAGGAGCTAGAGTC
CAATGTCTCCAGGGTGGCACAATGGCTGGACGCGTGGAAGAGCAATAAGT
CTGGGTCCTGATTGGTTGCGGTGCTTGCTCTGAACTGTTACATGCGTATT
GGAGGGTGGCGGAGGGGGTTCTTATACCGAACCAACTCAGGGGACTTGGG
AGGGAGTTGGGGCACGAGTTGCTGCCCTACGGGTATCACTCTCCCGATGA
CACGTCTGCCACTTTTTCCGAGTTCGATGAGCTGGAGAAACAAAATTTGC
ACTGCCGAAAGAGCGGGTCCATGTACAGCACATGTTTCAGTGTCACGACG
TAGCACCGTAGTTGTCGAGAAAATCACGGTGGAGAATTGATGTCACCCGG
CGTGGGGTCTACAGCCTGTGTGAACTAAGGCACCCCAAGTCCCAAGTACA
GCTTTCGAATATTGTCATTGTTTCATATTAAATCTAAATTGATGAGTTCC
TAGTTATATATATATATATATTTAAATTGATGAGTTCCTGTCGGTCCCAA
CGTTCAGGAACCCTGAACTGTTTGAGGTTGGAATTGAATGTGATTAGGTC
GGGGGGGCGATGTTTTGTCGCATGTTGCATGAGTTTTGGTGGGTTTTGGG
TTTCGAAAAATTGGTAAAATGGACAACTGTGAGCCTTTTATTCGGTCTGC
ATTTTGGATCGCCCGATGGTGCGCCTCAAGTCTGCCCGTGGTGTCTTTTC
ACGTCGTGTGATTAATGTGTGAGCGTGTTAGTGGCTCCCAGCTGTTAATA
TTTCGTGGGTACCGTTGGTAATCTCGTCTTATGTGGGAACAGTAGCCAAA
ACAGTAGCTAAAAATCGACAGGCTATCGTTGAGACAAATACTCGAACGTT
TTGATGGGTGTAGAGCTTCTGCCTAAGAATTCAGAGAAGCGAAATCTTTT
CTTGCGACCACAAATCCGTTTGGATTTTGGAGTTGTTGCGGTGCCTTCGA
TGCTAGTGAATGCTTCTAGAGAAAAGTACCAGCGACCACATGATATATAT
ATATATACTTCGAAAAAAAAGAAGTCGTTGATTTGTCTTTCTTACACGGG
ACTAAATGTTCGTTACAGTGGTGGAAAAGAAAACGTTTCTCTGGTCTTGG
GACTACTCATCATTGTGAAAGCCTGATGTTTTCAACACACCTGTTAGAGC
CCCGAGGGTGCACCTGACACAACAGGAAGACTAATTGAGCAACAATTCTT
TTGTGCCAACACTGCATTCGGGGGGTAAAGACTTGATAGTCGGTTATGTT
CACCGCAAATATCGGTCGTGTGCAGTCGTGGTTCTTGCAGTCAAGGAATG
TACATGCCGTTGTACCGAGAACTACGTCTCCCGTTCGATGGATTATCGCC
TCTTCGCGGCGGATGAGATCAACTTACTAAGAAGTTTTGTAAGGCTAAGA
ATAGTCCGAATATCGTCAAATTCATCGGCAGGCGTAGGACTGAATGGGTT
TGGCAGGATTTGACGAATGAGAAAGTGCTGGCAACAGAAAACTTTCGTGC
TCTGTGAGGAGCCAGTGTGGCGATGTAGGTGGAACCAAGTAGCGCAATTG
TAGTTATCGTAACTTCAGCCGGAGGAGACAAGAAGGATCCGTACAAAGTA
AGCTAATTGCCTTCCTATGATCTGGATTGTCCCTAAGCCTAAAAACAAGA
GTGCAGCCTCAAGCATGTCGGAGCAGCAATTCGTATCAAACCTCCGAGTT
GTGTCGTTCCTGTCGCTAAATAGCCGCTTACTAATTCCAGTTGCATCGTC
CGAAACGAAAACATTCTAGGGGTTGGGTACCCTAAACAGGCAC
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Coding sequence (CDS) from alignment at H-paniculata_contig3946:4664..9806-

>mRNA_H-paniculata_contig3946.10252.1 ID=mRNA_H-paniculata_contig3946.10252.1|Name=mRNA_H-paniculata_contig3946.10252.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1062bp|location=Sequence derived from alignment at H-paniculata_contig3946:4664..9806- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGGGAAAATCTCTGGGACCAAATGTTTTGGTTACGGGAACGCCTGGCAC
AGGAAAGACCTGCACATCGCAGCAGATCGAGATGGGAAAATCTCTGGGAC
CAAATGTTTTGGTTACGGGAACGCCTGGCACAGGAAAGACCTGCACATCG
CAGCAGATCGAGGAAAGAACGGGACTGAACCACATTAACGTCGGCGATGT
GGAAAGAACGGGACTGAACCACATTAACGTCGGCGATGTGGTGCGATTGA
AGCAGTGTCATGAGGGACGGGACGAGTCGTTCGACACTTTCATACTAGAC
GAGGATAAGGTGCGATTGAAGCAGTGTCATGAGGGACGGGACGAGTCGTT
CGACACTTTCATACTAGACGAGGATAAGTTGTTAGACGAGCTCGAGACGC
AGATGGAAGAGGGTGGAAATGTTGTGGACTTTCACTCTTGTGACCTATTC
CCGGAGCACTGTTGTTAGACGAGCTCGAGACGCAGATGGAAGAGGGTGGA
AATGTTGTGGACTTTCACTCTTGTGACCTATTCCCGGAGCACTGGTTTGA
CTTAGTTCTTGTGCTGAGGGCCGACACAAGCACTCTGTTCGACAGGTTAC
AGGCCAGGTTTGACTTAGTTCTTGTGCTGAGGGCCGACACAAGCACTCTG
TTCGACAGGTTACAGGCCAGGGGGTACAACCAAAAGAAGGTGACGGAAAA
CGTCGAGTGCGAGATCATGCAGGTGGTCTTGGAAGAGGCAAAGGAGTCAT
ATCCCGACGAAGCTGTGCACGAGGTCCCAAGCAATAACATCGAGGAGCTA
GAGTCCAATGTCTCCAGGGTGGCACAATGGCTGGACGCGTGGAAGAGCAA
TAAGTCTGGGTCCTGAGGGGTACAACCAAAAGAAGGTGACGGAAAACGTC
GAGTGCGAGATCATGCAGGTGGTCTTGGAAGAGGCAAAGGAGTCATATCC
CGACGAAGCTGTGCACGAGGTCCCAAGCAATAACATCGAGGAGCTAGAGT
CCAATGTCTCCAGGGTGGCACAATGGCTGGACGCGTGGAAGAGCAATAAG
TCTGGGTCCTGA
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