mRNA_H-paniculata_contig3901.10170.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig3901.10170.1
Unique NamemRNA_H-paniculata_contig3901.10170.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
[Close]
BLAST of mRNA_H-paniculata_contig3901.10170.1 vs. uniprot
Match: D7G567_ECTSI (Glyco_trans_2-like domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G567_ECTSI)

HSP 1 Score: 674 bits (1740), Expect = 1.760e-234
Identity = 342/402 (85.07%), Postives = 366/402 (91.04%), Query Frame = 1 
Query:  298 RMVHRVGMECLSPINVAR-DGPSNSVVTPLHSGRSAMSIRSATTSIAPAQYMREEMLTPSPPPNWASSFAGHFESRAGTMEFKDEEEGSRAASQMDTQLVAATDNGWAEVRKTRYINYVTVTLTHLIIFYILGSRGYIIIRDTLADQYYLRFVAFMYYLPAYVFMLFSIDYLLAQFIYALGPIAHMQENSKYFSSKPCPRPAVMPRVTIQMPVYKENLVETILPSIQSVMTAVLHYKKMGGEANLYINDDGLQVISEKERNARVFAYKRHGVSYVARPPPSIRPRKGLFKKASNLNYGLNVAVRVEEIMAESGGQVTDPVEALQLVNGEFNDEFFAGGDVRIGDIVLLVDSDTRVPEDCLSKSSGEFERYPKVGFMQCKTTSIRIHSNFWENMISRFTNDVY 1500
            R+VHRVGM+CLSPINV+R +G S+ V+TPLHSG+S +S    TTSI PAQYMREEMLTPSPPPNW   FA   E   G MEFKDEEE +RAA       +   D+GW EVRKTRYINY+TVTLTH++IF +LG+RGY I+RDTL+D YYLR VAF+YYLPAYVFMLFSIDYLLAQFIYALGPIAHMQENSKYFSSKPCPRPAVMPRVTIQMPVYKENLVETILPSIQSVMTAVLHYKKMGGEANLYINDDGLQVISEKERNARVFAYKRHGVSYVARPP SIRPRKGLFKKASNLNYGLNVA+RVEEIMAESGGQVTDPVEALQLV+GEFNDEFFAGGDVRIGDIVLLVDSDTRVPEDCLSKSSGEFERYP+VGFMQCKTTSIRIH+NFWENMI+RFTNDVY
Sbjct:  118 RVVHRVGMDCLSPINVSRAEGASSGVITPLHSGKSGLS---CTTSIGPAQYMREEMLTPSPPPNWGQHFATTTEREPGEMEFKDEEERARAAMTDREADLELGDSGWCEVRKTRYINYITVTLTHVLIFLVLGTRGYTIVRDTLSDGYYLRCVAFLYYLPAYVFMLFSIDYLLAQFIYALGPIAHMQENSKYFSSKPCPRPAVMPRVTIQMPVYKENLVETILPSIQSVMTAVLHYKKMGGEANLYINDDGLQVISEKERNARVFAYKRHGVSYVARPPASIRPRKGLFKKASNLNYGLNVAIRVEEIMAESGGQVTDPVEALQLVSGEFNDEFFAGGDVRIGDIVLLVDSDTRVPEDCLSKSSGEFERYPQVGFMQCKTTSIRIHNNFWENMIARFTNDVY 516
[Close]
BLAST of mRNA_H-paniculata_contig3901.10170.1 vs. uniprot
Match: A0A6H5LE92_9PHAE (Glyco_trans_2-like domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5LE92_9PHAE)

HSP 1 Score: 276 bits (705), Expect = 2.370e-80
Identity = 148/297 (49.83%), Postives = 202/297 (68.01%), Query Frame = 1 
Query:  622 VRKTRYINYVTVTLTHLIIFYILGSRGYIIIRDT---LADQYYLRFVAFMYYLPAYV-FMLFSIDYLLAQFIYALGPIAHMQENSKYFSSKPCPRPAVMPRVTIQMPVYKENLVETILPSIQSVMTAVLHYKKMGGEANLYINDDGLQVISEKERNARVFAYKRHGVSYVARPPPSIRPRKGLFKKASNLNYGLNVAVRVEEIMAESGGQVTDPVEALQLVNGEFNDEFFAGGDVRIGDIVLLVDSDTRVPEDCLSKSSGEFERYPKVGFMQCKTTSIRIHSNFWENMISRFTNDVY 1500
            VR TR INY T T+   ++ +IL +    + +     L D Y+ R V  + +LPA V FMLF + + + Q + ALGP+AHMQ NS++FS+    R    P +TIQMPVYKE+L   ILPSI S+  A+ HY+K GG A ++INDDGLQ++ EK+R ARV  Y+ H ++YVARPP  ++ RKGLFKKASN+NY L+V+ R   +M E G  ++DP  AL +V      EF AGGD+ +G I+LLVDSDTRVPEDCL+K  GEF+  P +GF+QC+TT +R   N+WE+MI+ FT ++Y
Sbjct:  195 VRVTRRINYFTQTI---VLVFILSTSALFVWKMVGLCLDDGYWGRMVN-VGFLPAVVIFMLFIVHFGITQIVCALGPVAHMQTNSQFFSALAPARALTYPDITIQMPVYKESLEAVILPSIVSLEAAMSHYRKAGGFAKIFINDDGLQLLDEKDREARVSVYRAHRIAYVARPPHGVKIRKGLFKKASNMNYCLDVSDRTMGVMEEQG--LSDPALALSMVQEAAQGEFLAGGDLTMGSIILLVDSDTRVPEDCLTKVVGEFQECPNLGFVQCRTTPLRAEDNYWEDMIAHFTENIY 485
[Close]
BLAST of mRNA_H-paniculata_contig3901.10170.1 vs. uniprot
Match: U1HPR0_ENDPU (Glyco_trans_2-like domain-containing protein n=2 Tax=Endocarpon pusillum TaxID=364733 RepID=U1HPR0_ENDPU)

HSP 1 Score: 209 bits (532), Expect = 1.660e-55
Identity = 123/307 (40.07%), Postives = 182/307 (59.28%), Query Frame = 1 
Query:  619 EVRKTRYINYVTVTLTHLIIFYILGSRGYIIIRDTLADQYYLRFVAFMYYLPAYVFM-LFSIDYLLAQFIYALGPIAHMQENSKYFSSKPCPR--PAVMPRVTIQMPVYKENLVETILPSIQSVMTAVLHYKKMGGEANLYINDDGLQVISEKERNARVFAYKRHGVSYVARPPPSIRP--RKGLFKKASNLNYGLNVAVRVEEIMA-----ESGGQVTDPVEALQLVNGEF---NDEFFAGGDVRIGDIVLLVDSDTRVPEDCLSKSSGEFERYPKVGFMQCKTTSIRIHSNFWENMISRFTNDVY 1500
            E R T  +N + V  T +I+  +LG+    +  +T+ D+ YLR +AF+   P  VF  LF    ++      +GP+  MQ NSKY+S+K  PR     +P +T+Q PVYKE L   I P+++S+  A+  Y+  GG AN++INDDGLQ++ E+ER AR+  Y  H + + +RP   +    R+G FKKASN+NYGL ++  VEE +A     E   Q  D  +A +    E    N   +A G++RIGD +LL+DSDTRVP DCL  S  E E+ P VG MQ  +  +++ +N++EN I+ FTN +Y
Sbjct:  252 EKRPTNLMNTILVAFTLVIVVVMLGAGFRAVAIETIVDKNYLR-MAFVLLTPVQVFFTLFFAQVIVGCIAQCIGPVRQMQLNSKYYSAKCSPRLQNRTLPHITVQCPVYKEGLASVIAPTVKSIKQAISTYELQGGSANMFINDDGLQLLGEEERQARIEFYVDHSIGWTSRPKHGVDGFLRRGKFKKASNMNYGLMLSCNVEEKLARYQRGEDWSQA-DEAQAYETCLKEVLEENGRAWADGNIRIGDYILLIDSDTRVPSDCLLDSVSEMEQSPNVGIMQFSSGVMQVVNNYFENGITFFTNLIY 556
[Close]
BLAST of mRNA_H-paniculata_contig3901.10170.1 vs. uniprot
Match: A0A4S2N0D6_9PEZI (Glyco_trans_2-like domain-containing protein n=1 Tax=Ascodesmis nigricans TaxID=341454 RepID=A0A4S2N0D6_9PEZI)

HSP 1 Score: 205 bits (521), Expect = 6.240e-54
Identity = 121/321 (37.69%), Postives = 189/321 (58.88%), Query Frame = 1 
Query:  592 VAATDNGWAEVRKTRYINYVTVTLTHLIIFYILGSRGYIIIRDTLADQYYLRFVAFMYYLPAYVFM-LFSIDYLLAQFIYALGPIAHMQENSKYFSSKPCPR---PAVMPRVTIQMPVYKENLVETILPSIQSVMTAVLHYKKMGGEANLYINDDGLQVISEKERNARVFAYKRHGVSYVARP-------PPSIRPRKGLFKKASNLNYGLNVAVRVEEIMAE-------SGGQVTDPVEALQLVNGEFNDEFFAGGDVRIGDIVLLVDSDTRVPEDCLSKSSGEFERYPKVGFMQCKTTSIRIHSNFWENMISRFTNDVY 1500
            V   D  + E R T  +N + VT T +++F +L +    I  +T  D  +LR + F+   P  +F  LF    ++       GP + +  NSKY+S+KP  R      +P VTIQ PVYKE L   I P+++S+  A+  Y+  GG AN++INDDGLQ++S +ER+AR+  Y+ H + +VARP         SI  R+G FKKASN+N+GL ++ +VEE++A+       +  Q  D  +A      E +   +A G++RIGD +LL+DSDTRVP DCL  ++ E ER P+VG +Q  +  +++ ++++EN I+ FT+ +Y
Sbjct:  260 VETGDVTYRERRPTNLLNTILVTFTIILVFCMLAAGYRQIAIETAVDGNHLR-ILFVLLTPVQIFFTLFFAQVIVGCLAQCFGPTSQLTTNSKYYSAKPPARLKMNGALPHVTIQCPVYKEGLASVIEPTVKSIKKAINTYELQGGTANIFINDDGLQLLSPEERDARIEFYQNHNIGWVARPGHNSKLKDGSIFQRRGKFKKASNMNFGLMISCKVEEMLAQIERDDSWTQAQEADAYQAALTEILEADGRAWADGNIRIGDYILLIDSDTRVPSDCLLDATTEMERSPEVGILQFSSGVMQVVNHYFENGITFFTDLIY 579
[Close]
BLAST of mRNA_H-paniculata_contig3901.10170.1 vs. uniprot
Match: A0A8J9WQ03_9CHLO (Probable cellulase/esterase CelE at C-terminar half n=1 Tax=Coccomyxa sp. Obi TaxID=2315456 RepID=A0A8J9WQ03_9CHLO)

HSP 1 Score: 205 bits (521), Expect = 1.830e-53
Identity = 129/332 (38.86%), Postives = 192/332 (57.83%), Query Frame = 1 
Query:  541 KDEEEGSRAA-----SQMDTQLVAATDNGWAE-VRKTRYINYVTVTLTHLIIFYILGSRGYIIIRDTLADQYYLRFVAFMYYLPAY-VFMLFSIDYLLAQFIYALGPIAHMQENSKYFSS-KPCPRPAVMPRVTIQMPVYKENLVETILPSIQSVMTAVLHYKKMGGEANLYINDDGLQVISEKERNARVFAYKRHGVSYVARPPPSIR--PRKGLFKKASNLNYGLNVAVRVEEIMAESGGQVTDPVEALQLVNGEFNDE--FFAGGDVRIGDIVLLVDSDTRVPEDCLSKSSGEFERYPKVGFMQCKTTSIRIHSNFWENMISRFTNDVY 1500
            K  E+GS AA     S  D +     +   AE +R  R+     V +   II  +LGS     IRD + D  + +  A + + P   V  +F +  ++   I  LGPIAH+++NS+ +S+ KP      +PRVT+QMPVY E     I PSI S   A+  Y+  GG A++++NDDGLQ++++++R  R+  Y+ H + YVARPP       R+G FKKASN+NY L V+ +VE IMAE+G    + ++A++L       E  F AGGDVR+G+ +LLVDSDTRVP+DC+     E    P V F Q  TT +++  +++EN ++ FTN +Y
Sbjct:  521 KGSEDGSAAAVSCSDSSFDVEEGLGEELCEAEALRPLRWNQPAVVIIACCIIMGVLGSGVGYAIRDAVEDGSWWKVAARVAFTPVISVLAMFGVIAIVCCIIVTLGPIAHVEQNSRTYSAVKPLRWRGKLPRVTVQMPVYLEGFEFVIKPSIFSYEAAIAAYRAEGGSASIFVNDDGLQLLNDEDREERIEFYRAHDIGYVARPPHGRAGFERRGRFKKASNMNYCLEVSRQVENIMAETGVDQYEALQAVRLATQAATPEHAFLAGGDVRMGEFILLVDSDTRVPQDCMLPVVTELMMSPNVAFTQHFTTPLQVAHDYFENAMAFFTNTIY 852
[Close]
BLAST of mRNA_H-paniculata_contig3901.10170.1 vs. uniprot
Match: A0A0N1HAM9_9EURO (Glyco_trans_2-like domain-containing protein n=1 Tax=Phialophora attinorum TaxID=1664694 RepID=A0A0N1HAM9_9EURO)

HSP 1 Score: 203 bits (517), Expect = 2.170e-53
Identity = 126/333 (37.84%), Postives = 189/333 (56.76%), Query Frame = 1 
Query:  544 DEEEGSRAASQMDTQLVAATDNGWAEVRKTRYINYVTVTLTHLIIFYILGSRGYIIIRDTLADQYYLRFVAFMYYLPAYVFM-LFSIDYLLAQFIYALGPIAHMQENSKYFSSKPCP--RPAVMPRVTIQMPVYKENLVETILPSIQSVMTAVLHYKKMGGEANLYINDDGLQVISEKERNARVFAYKRHGVSYVARPP--PSIRPRKGLFKKASNLNYGLNVAVRVEEIMA---------ESGGQVTDPVEALQLVNGEFNDEFFAGGDVRIGDIVLLVDSDTRVPEDCLSKSSGEFERYPKVGFMQCKTTSIRIHSNFWENMISRFTNDVY 1500
            DEEE   A       L   + +   E R T  +N + V  T +I+  +LG     +  +   D+ ++R +AF+  +P  VF  LF    ++  F   +GPI  MQ NSKY+S+K  P  R  V+P +T+Q PVYKE L   I P+++S+  A+  Y+  GG AN++INDDGLQ+ISE++R AR+  Y+ H + + ARP   P    RKG FKKASN+N+GL ++  +EE ++         +   +      AL  V  E     +A G++R+GD VLL+DSDTRVP DCL  ++ E E+ P VG MQ  +  +++   ++EN I+ FTN +Y
Sbjct:  246 DEEEDEDAXXXXXXDLDPESGDPVPENRPTNLMNTILVAFTLMIVIMLLGLAARSLAVEIAVDKGFIR-LAFLSLVPVQVFFTLFFAQVIVGCFAQCVGPIQQMQLNSKYYSAKLPPKLRRKVLPHITVQCPVYKEGLASVIAPTVRSIKQAISTYELQGGSANMFINDDGLQLISEEDRQARMDFYQDHSIGWTARPKHGPEGFVRKGKFKKASNMNFGLMLSCAIEEKLSAVHRNPADWDQASEDAAYAAALAEVLAE-KPRAWADGNIRMGDYVLLIDSDTRVPSDCLLSAASEMEQSPSVGIMQFSSGVMQVVHTYFENGITFFTNLIY 576
[Close]
BLAST of mRNA_H-paniculata_contig3901.10170.1 vs. uniprot
Match: A0A178Z612_9EURO (Glyco_trans_2-like domain-containing protein n=1 Tax=Fonsecaea erecta TaxID=1367422 RepID=A0A178Z612_9EURO)

HSP 1 Score: 202 bits (515), Expect = 3.330e-53
Identity = 132/340 (38.82%), Postives = 192/340 (56.47%), Query Frame = 1 
Query:  529 TMEFKDEEEGSRAASQMDTQLVAATDNGWAEV----RKTRYINYVTVTLTHLIIFYILGSRGYIIIRDTLADQYYLRFVAFMYYLPAYVFM-LFSIDYLLAQFIYALGPIAHMQENSKYFSSKPCPR--PAVMPRVTIQMPVYKENLVETILPSIQSVMTAVLHYKKMGGEANLYINDDGLQVISEKERNARVFAYKRHGVSYVARPPPSIRP--RKGLFKKASNLNYGLNVAVRVEEIMAE----SGGQVTDPVEALQLVNGEFNDEF---FAGGDVRIGDIVLLVDSDTRVPEDCLSKSSGEFERYPKVGFMQCKTTSIRIHSNFWENMISRFTNDVY 1500
            T E +DEEE     ++ +   +A+ D+   E+    R T  +N + V  T +I+  +LG     +  +   D  Y+R +AF+  +P  +F  LF    ++      LGPI  MQ NSKYFS+K  PR    ++P VTIQ PVYKE L   I P+++S+  A+  Y+  GG AN++INDDGLQ+I E++R AR+  Y+ H + + ARP        RKG FKKASN+NYGL ++ +VE+ +      S     D  EA      E  DE    +A G++RIGD +LL+DSDTRVP DCL  +  E E+   VG MQ  +  +++   F+EN I+ FTN +Y
Sbjct:  212 TGEARDEEE---VTNEKNRASIASVDSESGELPPQERPTNLMNTILVAFTLIIVVTLLGLACRSLATEIAVDGSYIR-LAFVSLVPVQIFFTLFFAQVIVGCVAQCLGPIQQMQLNSKYFSAKCSPRLRTQILPHVTIQCPVYKEGLASVIAPTVKSIKQAISTYELQGGTANMFINDDGLQLIDEEQRKARIDFYQDHNIGWTARPKHGSEGFVRKGKFKKASNMNYGLMLSCKVEDKLQRYHRNSAWTPNDESEAYDECLREVLDETPRAWADGNIRIGDYILLIDSDTRVPVDCLLDAVSEMEQSLNVGIMQFASGVMQVVHTFFENGITFFTNLIY 547
[Close]
BLAST of mRNA_H-paniculata_contig3901.10170.1 vs. uniprot
Match: A0A3N4LXK0_9PEZI (Glyco_trans_2-like domain-containing protein n=1 Tax=Terfezia boudieri ATCC MYA-4762 TaxID=1051890 RepID=A0A3N4LXK0_9PEZI)

HSP 1 Score: 202 bits (513), Expect = 4.290e-53
Identity = 124/306 (40.52%), Postives = 182/306 (59.48%), Query Frame = 1 
Query:  619 EVRKTRYINYVTVTLTHLIIFYILGSRGYIIIRDTLADQYYLRFVAFMYYLPAYVFM-LFSIDYLLAQFIYALGPIAHMQENSKYFSSKPCPR--PAVMPRVTIQMPVYKENLVETILPSIQSVMTAVLHYKKMGGEANLYINDDGLQVISEKERNARVFAYKRHGVSYVARPPPSIR--PRKGLFKKASNLNYGLNVAVRVEEI--MAESG---GQVTDPVEALQLVNGEFNDE--FFAGGDVRIGDIVLLVDSDTRVPEDCLSKSSGEFERYPKVGFMQCKTTSIRIHSNFWENMISRFTNDVY 1500
            E R T  +N + V+ T L+I  ILG+    I ++T  D  YLR +AF+   P  +F  LF    ++      +GP+  M  NSK++S+ P  R   AV+P +TIQ PVYKE L   I P+++S+  A+  Y+  GG AN++INDDGLQ+I EKER  R+  Y  H + +V+RP        R+G FKKASN+N+ L ++ RVEE   M E G    Q+ +  E  + +     ++   +A G++RIGD +LL+DSDTRVP DCL  ++ E ER P VG MQ  +  +++  N++EN I+ FTN +Y
Sbjct:  198 ERRPTMLLNTILVSFTLLLICVILGAAFRSIAQETAVDGNYLR-MAFIVLTPIQIFFTLFFGQVIIGCIAQCIGPVRQMTMNSKFYSALPPKRLRSAVLPHITIQCPVYKEGLAAVIAPTVKSIKQAISTYELQGGTANMFINDDGLQIICEKERRDRMEFYTDHNIGWVSRPGDGHNGFKRRGKFKKASNMNFALMISNRVEEKLDMTERGPDWSQLNEGREYERCLKEVLEEDGRAWADGNIRIGDYILLIDSDTRVPADCLLDAASEMERSPDVGIMQYSSGVMQVVHNYFENGITFFTNLIY 502
[Close]
BLAST of mRNA_H-paniculata_contig3901.10170.1 vs. uniprot
Match: A0A5J5EQ52_9PEZI (Glycosyl transferase family group 2-domain-containing protein n=1 Tax=Sphaerosporella brunnea TaxID=1250544 RepID=A0A5J5EQ52_9PEZI)

HSP 1 Score: 202 bits (514), Expect = 4.720e-53
Identity = 121/309 (39.16%), Postives = 183/309 (59.22%), Query Frame = 1 
Query:  610 GWAEVRKTRYINYVTVTLTHLIIFYILGSRGYIIIRDTLADQYYLRFVAFMYYLPAYVFM-LFSIDYLLAQFIYALGPIAHMQENSKYFSSKPCPR--PAVMPRVTIQMPVYKENLVETILPSIQSVMTAVLHYKKMGGEANLYINDDGLQVISEKERNARVFAYKRHGVSYVARPPPSIRP--RKGLFKKASNLNYGLNVAVRVEEIMAE----SGGQVTDPVEALQLVNGEFNDE---FFAGGDVRIGDIVLLVDSDTRVPEDCLSKSSGEFERYPKVGFMQCKTTSIRIHSNFWENMISRFTNDVY 1500
            G+ E R T   N + V+ T +++  +LG+    I  +T  D  Y+R +AF+   P  VF  LF    ++       GP++ +  NSKY+S+KP PR     +P VTIQ PVYKE L   I P+++S+  A+  Y+  GG AN+++NDDGLQ+IS +ER AR+  Y  H + +VARP        R+G FKKASN+N+ L ++ +VEE +AE             EA +    E  +E    +A G++R+GD +LL+DSDTRVP DCL  ++ E ER P+VG MQ  +  +++ ++++EN I+ FTN +Y
Sbjct:  247 GYRERRPTMLWNTILVSFTIMLVLCMLGAGYRQIAIETAVDGNYVR-MAFIALTPVQVFFTLFFAQVIIGCLAQCFGPVSQLTINSKYYSAKPPPRIRTLTLPHVTIQCPVYKEGLEAVIAPTVRSIKQAISTYELQGGTANIFMNDDGLQLISPEERQARIDFYTDHNIGWVARPKHGENGFLRRGKFKKASNMNFALMISCKVEEKLAEIERDEAWTQAHEAEAYERCLKEVLEEDGRAWADGNIRVGDYILLIDSDTRVPSDCLLDAASEMERSPEVGIMQFNSGVMQVVNHYFENGITFFTNLIY 554
[Close]
BLAST of mRNA_H-paniculata_contig3901.10170.1 vs. uniprot
Match: A0A194URL9_9PEZI (Glucans biosynthesis glucosyltransferase H n=2 Tax=Valsa mali TaxID=105487 RepID=A0A194URL9_9PEZI)

HSP 1 Score: 202 bits (513), Expect = 5.500e-53
Identity = 127/307 (41.37%), Postives = 177/307 (57.65%), Query Frame = 1 
Query:  619 EVRKTRYINYVTVTLTHLIIFYILGSRGYIIIRDTLADQYYLRFVAFMYYLPAYVFM-LFSIDYLLAQFIYALGPIAHMQENSKYFSSKPCPR--PAVMPRVTIQMPVYKENLVETILPSIQSVMTAVLHYKKMGGEANLYINDDGLQVISEKERNARVFAYKRHGVSYVARPPPSIR--PRKGLFKKASNLNYGLNVAVRVEEIMAES------GGQVTDPV--EALQLVNGEFNDEFFAGGDVRIGDIVLLVDSDTRVPEDCLSKSSGEFERYPKVGFMQCKTTSIRIHSNFWENMISRFTNDVY 1500
            E R     N V V++T   I   LG+    I  +T  D   LR VA +   P  VF  LF    +        GPI  ++ NSKYFS+K  PR   + +P VTIQ PVYKE L   I P+I+S+ TA+  Y+  GG ANL++NDDGLQ++ E++R AR+  Y  +G+ +VARP        R+G FKKASN+NY L ++ RVEE +A +      G      V  +ALQ V+ E     +  G++RIGD +LLVDSDTRVPEDCL  +  E E+ P+VG +Q  +  +++   ++EN I+ FTN +Y
Sbjct:  227 EKRPLHLQNSVLVSVTLSAITLSLGAAFRQIAVETQTDSTLLR-VALVSLFPIQVFFTLFFCQVIWGSLAQCCGPIRQLETNSKYFSAKKSPRLQSSTLPHVTIQCPVYKEGLAGVIAPTIKSLKTAITTYELQGGSANLFVNDDGLQLLPEEDREARIDFYSENGIGWVARPRHGDNGFQRRGRFKKASNMNYALMISCRVEEKLAPARRGPGWGQHAESEVYSKALQEVSDEMKGRAWMDGNIRIGDYILLVDSDTRVPEDCLLDAVSEMEQSPEVGILQFSSGVMQVVDTYFENGITFFTNLIY 532
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig3901.10170.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G567_ECTSI1.760e-23485.07Glyco_trans_2-like domain-containing protein n=2 T... [more]
A0A6H5LE92_9PHAE2.370e-8049.83Glyco_trans_2-like domain-containing protein n=2 T... [more]
U1HPR0_ENDPU1.660e-5540.07Glyco_trans_2-like domain-containing protein n=2 T... [more]
A0A4S2N0D6_9PEZI6.240e-5437.69Glyco_trans_2-like domain-containing protein n=1 T... [more]
A0A8J9WQ03_9CHLO1.830e-5338.86Probable cellulase/esterase CelE at C-terminar hal... [more]
A0A0N1HAM9_9EURO2.170e-5337.84Glyco_trans_2-like domain-containing protein n=1 T... [more]
A0A178Z612_9EURO3.330e-5338.82Glyco_trans_2-like domain-containing protein n=1 T... [more]
A0A3N4LXK0_9PEZI4.290e-5340.52Glyco_trans_2-like domain-containing protein n=1 T... [more]
A0A5J5EQ52_9PEZI4.720e-5339.16Glycosyl transferase family group 2-domain-contain... [more]
A0A194URL9_9PEZI5.500e-5341.37Glucans biosynthesis glucosyltransferase H n=2 Tax... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig3901contigH-paniculata_contig3901:192..11428 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score673.7
Seed ortholog evalue6.6e-191
Seed eggNOG ortholog2880.D7G567
Hectar predicted targeting categoryother localisation
EggNOG free text desc.Glycosyl transferase family group 2
EggNOG OGs28KUH@1,2QTAT@2759
Ec32 ortholog descriptionNucleotide-diphospho-sugar transferases
Ec32 orthologEc-14_006400.1
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons8
Model size1507
Cds size1506
Stop1
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig3901.10170.1prot_H-paniculata_contig3901.10170.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig3901 192..11428 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930196.982008-CDS-H-paniculata_contig3901:191..4401622930196.982008-CDS-H-paniculata_contig3901:191..440Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig3901 192..440 -
1691481187.0500877-CDS-H-paniculata_contig3901:191..4401691481187.0500877-CDS-H-paniculata_contig3901:191..440Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig3901 192..440 -
1622930196.9997754-CDS-H-paniculata_contig3901:906..11101622930196.9997754-CDS-H-paniculata_contig3901:906..1110Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig3901 907..1110 -
1691481187.063761-CDS-H-paniculata_contig3901:906..11101691481187.063761-CDS-H-paniculata_contig3901:906..1110Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig3901 907..1110 -
1622930197.0143287-CDS-H-paniculata_contig3901:2045..21681622930197.0143287-CDS-H-paniculata_contig3901:2045..2168Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig3901 2046..2168 -
1691481187.0718338-CDS-H-paniculata_contig3901:2045..21681691481187.0718338-CDS-H-paniculata_contig3901:2045..2168Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig3901 2046..2168 -
1622930197.0301986-CDS-H-paniculata_contig3901:2861..29721622930197.0301986-CDS-H-paniculata_contig3901:2861..2972Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig3901 2862..2972 -
1691481187.0804663-CDS-H-paniculata_contig3901:2861..29721691481187.0804663-CDS-H-paniculata_contig3901:2861..2972Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig3901 2862..2972 -
1622930197.043552-CDS-H-paniculata_contig3901:3978..40631622930197.043552-CDS-H-paniculata_contig3901:3978..4063Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig3901 3979..4063 -
1691481187.0915172-CDS-H-paniculata_contig3901:3978..40631691481187.0915172-CDS-H-paniculata_contig3901:3978..4063Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig3901 3979..4063 -
1622930197.056756-CDS-H-paniculata_contig3901:4672..48571622930197.056756-CDS-H-paniculata_contig3901:4672..4857Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig3901 4673..4857 -
1691481187.106369-CDS-H-paniculata_contig3901:4672..48571691481187.106369-CDS-H-paniculata_contig3901:4672..4857Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig3901 4673..4857 -
1622930197.0732005-CDS-H-paniculata_contig3901:6827..70061622930197.0732005-CDS-H-paniculata_contig3901:6827..7006Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig3901 6828..7006 -
1691481187.120284-CDS-H-paniculata_contig3901:6827..70061691481187.120284-CDS-H-paniculata_contig3901:6827..7006Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig3901 6828..7006 -
1622930197.087855-CDS-H-paniculata_contig3901:11058..114281622930197.087855-CDS-H-paniculata_contig3901:11058..11428Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig3901 11059..11428 -
1691481187.1303859-CDS-H-paniculata_contig3901:11058..114281691481187.1303859-CDS-H-paniculata_contig3901:11058..11428Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig3901 11059..11428 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig3901.10170.1

>prot_H-paniculata_contig3901.10170.1 ID=prot_H-paniculata_contig3901.10170.1|Name=mRNA_H-paniculata_contig3901.10170.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=502bp
PRGHGLERGPPSFSSNVSGQSSRGGTGAAAGGVIDHRRNYSAASLESMAR
AAGGGGAGATGSSSQAGRGGPAGDGVDSEASDSKHGGGWGPGGGGGSAPR
MVHRVGMECLSPINVARDGPSNSVVTPLHSGRSAMSIRSATTSIAPAQYM
REEMLTPSPPPNWASSFAGHFESRAGTMEFKDEEEGSRAASQMDTQLVAA
TDNGWAEVRKTRYINYVTVTLTHLIIFYILGSRGYIIIRDTLADQYYLRF
VAFMYYLPAYVFMLFSIDYLLAQFIYALGPIAHMQENSKYFSSKPCPRPA
VMPRVTIQMPVYKENLVETILPSIQSVMTAVLHYKKMGGEANLYINDDGL
QVISEKERNARVFAYKRHGVSYVARPPPSIRPRKGLFKKASNLNYGLNVA
VRVEEIMAESGGQVTDPVEALQLVNGEFNDEFFAGGDVRIGDIVLLVDSD
TRVPEDCLSKSSGEFERYPKVGFMQCKTTSIRIHSNFWENMISRFTNDVY
R*
back to top

mRNA from alignment at H-paniculata_contig3901:192..11428-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig3901.10170.1 ID=mRNA_H-paniculata_contig3901.10170.1|Name=mRNA_H-paniculata_contig3901.10170.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=11237bp|location=Sequence derived from alignment at H-paniculata_contig3901:192..11428- (Halopteris paniculata Hal_grac_a_UBK monoicous)
CCCCGCGGCCACGGTTTGGAGCGAGGCCCACCATCGTTCTCTTCAAACGT
CTCTGGTCAATCTTCACGGGGCGGCACGGGCGCGGCAGCTGGCGGTGTCA
TTGACCACCGAAGGAACTATTCCGCTGCCTCTCTTGAGTCCATGGCTCGT
GCTGCTGGAGGCGGCGGTGCGGGTGCGACAGGGTCGTCTTCTCAAGCAGG
GCGAGGAGGGCCTGCTGGGGATGGGGTAGACTCAGAGGCCAGCGATAGTA
AGCACGGCGGCGGCTGGGGGCCCGGAGGTGGAGGAGGGAGCGCGCCGCGG
ATGGTACACCGGGTGGGAATGGAGTGCCTGAGTCCTATCAACGTCGCAAG
AGATGGGCCGTCTAACAGTGGTGAATGGAAAGCTCATGTGGACTAATTGA
GTCGACTATACTCTACTGTACTCTATTTTGACTGTGCACTTTCATCTTCT
AGTGAACTTTAAAACTGAACTGTACCAACTGTACTGATGATGCCAGCCAA
TTTCATATGGTGCGGAAAATCTGTTAGTTGTCTTGCCTGGTTTGGCTCGA
CTGCATGTTGCTGCCCGCGATTTGGAGAATGTATTTTTTTGGTCGGCATG
CCGTTGCGCTCTGTTCCTTGCTTGCTTTTGTGTCTGATGTGTAAGCTATT
TCACGTTTCTTGTCTTGCAAAATTCTGCCACGTCCACATTATTAGGATCA
AATCTTGTTGGACCTCTTACCACTGACTACTGCACAATCCTTACAGTCCC
CAAACAGGCAACGGACTGTTGCACTGTCTGTCCTGTCTGTCCTGTGGTAC
GTCTGTACGTCTGCGCTCTCTGTGTTTTTGTATTTGTAAAAACATGCATT
TTTTCCCACATGGGCAGCTACTACGCAGGTACCACGTAATTTACGGTGTT
TGGGAACATGCTGACGACCGATGCTCAATGATCCACATATGGCCCCAAAT
ATGTAGTACAGTACAGCATATTCAGACAAAGTGCATCAGTAGCCAGGCAG
TTACAAATTTCTGTTCTTAGTTTTCGGTAGGGTCCCAGATACTAGCGTAC
GCAATATCATAGCGCACAGTCAGTCCACCTCACTGCCTGCCCGACTGTCT
TCTCTGTACTGAACCTGGCACAGGAAATGTATCTGTCGTGTATCATTAGC
CGGTATGATAGTTCAGGTGTACCACCCGAAGTCAGTGCTTCTGTTTCTTC
CATGACAGCTGTGACTTGTTTGTCACCCAGCTCTATGTTGACCGTTTCTA
TGGGATTGTTGCGCACACGGGCAGGGGAAACCTGCCAGTGTGCGTTATAC
CTGATTCCTGTGCTACAGTATATTTCTTGAGTGATGATGTAGGGAGCAAA
GAGACTGTTTCGGAACAAAAAGCGAAGTCGAGAAAAATATGGGTCACCGC
AATCGTTGTGTTATAGAACCACACCGACTTGATATTTCTATTCTTCCTCT
CTTTCTCTGGGGTGCTATATGCTGCCTGCTGTGCTAGACTCCAGGCTAGC
TGTTTGTATGTGTGAGGGTCGGTAGACATGAATGACCTACATTCAAGTGT
CAGTCGAGGCGTAGCCTGCTCCGCTGTTTACTGTAATACATCTTTTTTCA
CGAACTCGGTCAGTGAACAAGTGCAGTCCTCATGGTTGTTGAAGTATCTA
AAAATGGTGGCGTTAAGAGAATGATCAATTTAATTATTAAATTGTGGCCC
CGAACTAGGTAATTTCTGTAATTGGAAGCATATCAGCAACCTCTCTTTTC
GGGTCATCTTATAACAGTAAGGTTATGAGGTTTTGAGCTTAACCCAGAAT
AAAATAGTATTTCTATTAGCGAGCCACAACTTTTGTTGTTCATTAGGCAA
GGATTCTGTGGGTACTGGGGCGCAACGGGTTTGAAGTAAACAACGAGACC
CGGTACATGATACCGTCTAATTTTGCGAATTTCACAGACGACATGTGTAT
GTATCAAAGTACACGGTGAGCACATTAAAAAAAAAAATCAATTGCATGAT
CAATTGAGGCTGAGACTTATCGAACGATATAAAAAATAAAATAAAAATCC
CGCAGGTAATCGATTTGGTCACGTTTTGAGAAAAAAAAAAAAATGTTCTA
TTGAGAAAACCAAGTCTGACACCCCTGTAGATTTTGAGTTTTTTTCTTCT
GGACGGTCGGATAACGGTCGAATTGAGCAAAGTCCACTATTATCGGTTTC
AGGTGAAAAAAAGTACTACGGAACACCATATCCACAGAGAGCCCAACGTA
GCACGCAAGCAAAATGACATAGAACAAGAGTACACGACCACTAGCACGGA
CGATAGTAGGACTTGCTCAGCTTCACGCGCCAGAATAGGTTTGAGCGGAA
TTCATCCTCTACTGGGAGAGCTGCTACAGCAGTTCACCTTGAATTACAAA
AACCCAAAAGTGCCGTTTTGTGATCCTACATTATCTGATTCGGACGGTCA
TCACGAAAAACGCCTCTTTCCCTTCATTTCGAATTGTTTCTACTCGAGAT
CACCGATACAGGACTCAGTTACTGAAGAGCTACGGACCCGGACTGTACGT
TATTTTTTGTTGAACCCAGTAGAGTAACGCTCACAATCGTTGTGCTGCTC
TTCTTTGACTATATCTTGCAATCCACCGCCTTTGGCCACTTGCTTGACAC
GAGAGAGGCTTGGTCTCTCCTCGATCTTTGTGTCTTCCAGTCAAAAGCAT
TGCTCGATTCATTTCTTTGCCCACAACTACGAGAGTCGTTTGGCTGAGAG
AAAAACTTGAGACTTTTTTGTCCCCGTATGTTCATATATATATTTATATA
TATATATTTAAAGAATCCTTTAGCTTTTTTGGTATGTACAAAAAGAGAAA
GGAATGACCAGATTCAGAACCAACGAGAGTTCCGAGAATTTTTCCCAACC
AAAATCGTAAGACCCGTCAACCAAAAAGTTGATTTCTATTCGGCAATTTA
GCAATAATCATGTTTTTTTTGGTTTTTTTTCTTTTGAAATGAGTCAGCCT
CAATCAGATTTCTATACAGACGAATACAGTACTGAGGGTCTTACAAGAAA
GATGTAATAGGTCCACACAGGATTAAAGGTACACTGTACTGTGGCCCAGC
CGTCGGACGTAAAGCGGAAACTCAAGGAGCAGATCCACCCGGTGGCATCC
CCACGGGTAAAGAAGACCAGAAGATAACACTTAAGACTCTTACGAAATTA
TAGTAACCTAATACCAGGCACGCGCAGACGCTCCTAACTCATGCTACGTG
CATCAAGCAAGCCGTCCGGGGAGATTTGTCAAAGAAAGAAGGAAAGGTCG
CATGTATGTATCATGGTATAGTCAGCGAGTCCCTCTCACAGACATTCAAC
ACGCTGTATTCTCAGGGCTCGCCTTCTGTCGTTGTATGTTCGCAATAAAA
TAAGTTTTTTTTCTAATTCCCCCTTCTTGCCACGGCCAGAGAGAGAGAGA
GAGAGAGAGAGAGAGCTGCAGGTCATTGTGTGTAGGCAGCACCATACCAA
CTCTCTGTGCTGTGTACATCTCTAGTCTGTACTGGAACTGGTTGTCTTGA
CAGCGACAGCTCCCTAATCCCTGCTGCATAAACCCGCGCGCAAGCTCTGG
GCTACAGTACCGCCTCAGGCGCATACATAGCAATACAGGCAGGCAGTGCA
ACCGCAGTTTCCAGGCATGACAGCGTGGTAGTATAGGTACACGACGATTG
CAACGAACTGTTTAACGAAAAAAATATGTGGGTTGTCCATTGTCGTTGAT
ACGCCAACCGCACAGAAATAGCGCGTGATTCGTGTCCCTGTGTATGCTCA
TAGACTGAGTGAGGATTTCACTCATTCGATCGTTTGAAATAACCTCCCTT
TGAGTTCCCGTAGGGACCCCCTAGGGGGTCCTACTTCGTGTTCTCGCTGA
GTAGATAAGTCGACTGATGTATAGGAGACAATGACGATCGTGATTGGCCG
AACCTGCACACTTTTTTTTACTCAAATTTTCTTGGCCATATTCCAGCTCG
CTGAGTGTCGTTTCCCAGGATTATATTAGATGCTCTTTTTGTTGCGAAAC
AGCCAGGGACGCCAAGGGGTTTCAGTTTAGCGAATTAATCGATCCAATTC
CTGTATTGTTTCCCTTGAAAAAAACTACATTTAATAGTCTTGTTGGAAGC
ACCAAAGGGGTATACTGATGATGTGATGGTCACCGGGAGTGCGCTTGTCA
AATTTCCGATTCAGGGAGATGCATGATAGCTCTCTCCGTTTATAAAATAC
GTAGGCGTTTTATGATGCCGGGGAGGGGGGTTAGAGGGTTAGGTATACAG
TAAGTACGGGTTTGCACATAAATAGGTGTCGGGTGTTTTTTTCTTTCCTT
TTGCGTTCGTTGCACTTACTGATGACGAGTTGTTCTCTTATTTTTCGCGC
ATCCTGTCTACGAAAATCGCAGTCGTAACACCTCTTCACAGCGGGAGGAG
CGCGATGTCCATTCGCTCCGCGACAACTTCTATCGCCCCCGCGCAGTATA
TGCGAGAGGAGATGCTCACCCCGTCCCCGCCGCCAAACTGGGCTAGCTCG
TTCGCTGGCCACTTTGAGAGCAGGGCGGGAACGATGGAGTTCAAGGACGA
GGTGTGCTATGTATGACTGTATGCATCCTATACATACATAACGTGCGTGC
GTGCGTGTGTGTGTGTGTGTGTGTGTGTTCGCAATGTGTGTGGGCCATGT
GTAGTTTGTATTATGTACGTATTATGTATTAATGTCGTGGGTTGCATGTA
GAGTACATGCAACTAAATGCATATTGCAATGGTTGGCGGATTAGAGGTAA
AACAGAACCATGGACTTTTTTTGGTGTGTTTTGTGAGGTAGGCGGTCCTA
TGTGCGGTGCGAGAAAACAGAATTTGAAGCCGGTAAAATTTCCTCATGTC
AGATATGACCTCCAGTCAGGAAAGTGTGCGTTGCGGTGGGGTCTTGGCTC
GAAGACTGACGGTATTTGACAAAAAGGCGATGATGAAATGTTCTTCAAAT
CTTTATGACTAGGGTTTTTTGTAGATGTGAGCATGGGTTTCATCGAGACG
AAACTGAAGTGTACTTGTAAAAAAAAAAAAAAAATACATCCCAGCAATCA
AACACAAAAACGCAATATCTTGACACACAAACCAAATTACAACCAAGCAT
TCGAAGAACAGCCAACGCTACGCTTTGCGACGTACAGATAGATACACAAT
GGAAACAGATAATAAAAACATATTATATTTCAATGTCATGAGATATCTAA
CACTAAAAAACAATACTGCGAAGCTAGCTAGCCTGTCAACACTGCACGAG
CCAGACGTGGTTTTTTGCCCCCCATTTTTTTAACGCTGAATTTAGTGTAT
ATAGAAAAGACGAGAGAGTATTTTTTGCTTGTATACATTAATCTAATGTT
TACTGTTCTCCCTCCTTCCCTCTTAGTGGTCATCATCTAATTTTTCTGAC
AAGTGCAAACAAGTGCAGATTGAAGTCAGCTGTATTGCATAACCTCGACA
TGGGTACAGTGGAGGTATAACATGAGCTTCAGAGTTAGAGCGTGATTACC
TCTGGCAGGGTTCCCACCCCCCGGACAAGTGTGAATACTTGCAAATGGTT
TTTACAAAAAACCTGAAAGTATTTGCCTGAGTTTCAGAATGAGCGGACAC
GTAAAATAAAGTATTCATCCCTGTATATTCGATTAACGAGTTTTATTAGC
GGTCGTGGATGGTTCAGGGGCACATAAAATACACGAGCTCATTCTTGAAA
GTCAGGCGAATACTTTTAATTTTTTTTTTTGTGACGACTATTTGCAAGTA
TTCGTATTAATCCGGGAGGGGGGGGGGGGGGGGCGGGGTTCTTTCCCTTA
AAATATATATATTTTTTTTTTATTAAATAAAAACGAGGGTTGTTTTTAAC
TTTTAAGGGTGCCAGTCTTTTATAANNNNNNNNNNTCCTCTCGCCACTGT
GGTCTTTATTTATGTTTTTTTTTTTTTTTTTGTTTTGGTGTGGGTGTTGG
TATGTAGACGGGGGAGGTGGGGGGGGGGGGGGGGGGGGGGGGGGCAGGGT
TCATTCACTGAAATATATATATATTTTTTTGTTAGTCAATAAGAACGAGG
GTTGCTTTTAACTTTTCATGGTGCCAGTCTTTCATAAAAGAACAATTTCA
TGTTTCACCTACAGCACAGTACAGTACACAATGCGAGTGATAAAGTGATT
CTCCCTTGTGAAGGTTGCCGTAGCCCTTGTCGTGCGTGATCGAAGAGGTG
CCAGAAGTTCCGATACCTGGTCATGATGTGGCTGGGATTGATGCCATGTG
AACAGGATCTTGTCGACCAGAGGGTCTGCCCTCTTGGTCTATTCAGTTTG
TGGATAATGACATAATAATCAAGTAATCCAGCACCTTAAAATATGCTAAG
CGTACCTCATTTTTTTTCTTCTCTCTCTCCCCTCCCCCCCCCTTTCGCGA
CATTGGCAACTTGTACCATAACAATCCGTTCCTATATACGTGTGTAGCCA
AACCCATTGCCTTGACGGACCACTCGATATACCCTCTGACAAATACACAC
ACACAAAACAAAAAACGGCAGGAGGAGGGGTCCCGTGCAGCCTCGCAAAT
GGACACGCAGCTGGTGGCGGCGACCGACAACGGGTGGGCGGAGGTTCGAA
AAACGCGCTACATCAACTACGTGACGGTGACGCTTACCCATCTCATCATT
TTTTATATTCTCGGGAGCCGGGGATATATCATAATTCGCGACACTCTCGC
TGACCAGTGAGTTTTTTATAGGTCAACTGCATTTAGCTTTTTTTTTCATC
TATGGTATGATATTATCATATGTACTCGAGGTGAAAATGTGACAGAACTC
CAAATAACGTTTTTCAAATAGTAATAATAGTCCTTGTAAATAATATATGT
ATATCTATATTATTTCACCACTCACACTTGCCCAGTTTTTTCTACTTCAT
TATGATCTATAGTTTTTATTATTTTCTTGAACACTTTTTGTACGAAGACG
CGATTCACATGTTGCCTCCCCCCCCCCCGTTCGCAGCGATTCGATTTTAT
GAAGATAAAACAAAAACAAAAATCACGCAAAACGTTCCATGCTTGATATT
TCATCTCTCAAGAGGTCATGGAAAAAGCCTTTGTAGGTTGCCCTGCCGCA
CGTGGGGATGCGCGCGCGGGGGGGAGGACCGGGGGGGGAGGGGGGCACTA
AAAATCGTGTCAAAAAACGAATATTTTGTTGACCTTTAGACCGCGCCTAA
CACTGTTTCATGTTGGATCTATACCGCAAGAGCAATATCTCTTCGCTGTA
CAGGTTACACGCTCATGGTTCCCCTTCTCCCCTTGGTTCCTTCGTATGCG
TCTGTCATCATCCAGATACTACTTGCGGTTTGTGGCGTTTATGTACTACC
TTCCCGCGTACGTGTTTATGCTCTTCAGCATCGATTACCTTCTTGCCCAG
GTAAGTTTGTTTATGTTGGGGTTTTCAGACGCATCTTCCTTCGTTGCTTT
CTTGTTCTTTCTCGCTGCACATGGAATATTGAAATGTATCAGTGATTTTC
GGTTCAGCAGCGAGATGATGTATGCTGGTAGTTACTGCTGCAGAAGGCCG
CAGACATGGTGCGTGTATGTTTGTGTGTCGATTTGTTTCTTCGTTTGTAC
CCCCTCTGTCGCGCGGAGTGGACATCGGCCTGTACCAGCCGGTATCTCAT
CATTTTTATCATTAGAAAAATGGGATCATTTTCGGCCTGTTTGATGTACA
GAGTGTTGAGGATATATGAGGATACACCCGCAGGCAGCTGCAAAGGCTGG
CGCTAGTAGCTGTTAAGCTGACTGAGCAAGCACGCTGTGCCGAGGATACA
AACAGTCGATGATGGTTGAAAAGTGTCGCTTATAGGCTAGAGAAGAAGCA
AAAAAGAGCAAAAAAGAGAATCAAGAGGAATCTTTCAAGGAGTGAGAGAT
GTTGGGGCGCACCTCATCGTATGTCCGCTCTCTCCTAAGCCACGTACACG
CCTCCTCCGCGTACAAGTGCCATCGTTCCTACCGTTCCGCGATTTACAGG
AATTTCTCAAAGAACTGTCGGATCAACCTCTTTCGGAACTAAATTTCCCA
ATTTGTGGAATATAGACGAGTGACTACGAAACGCCACGAGTTGTGCCGCT
ATTATGTCATAACTCCTCAGATCTATCCTCGTATACTAAGTCGCAGCAAC
ACGTACTTTCAATTTTAGGCAATCATATATACAGTGCTACACTAGTGATC
ATCGACAGACAGGTCACCCTAAGACTCTGTTTCAAACACACTGTTATATA
TTACTGCTGTGTAAAGCTCAACACACTCCATGCTACGAAGTATTGACTAC
ATAGGCATACTTGTCTATTTCTTAACAGAGTATATTATGGCATCCTACCC
ACCCTTTCTTGATTCTTTCTTTCTTCCGCCCTTGTCATCGTTTATGGAAC
GGCCAGTTTATCTATGCATTGGGACCAATTGCGCATATGCAGGAGAACTC
CAAGTACTTCAGCAGCAAGCCTTGCCCTCGCCCGGCTGTAATGCCCCGCG
TTACCATCCAGATGCCTGTGAGTTGTTGTTTTGACTTGTCTTGCCTTGTC
TTGCAAAACATTTTGTGGTATGTATATTCTTGGTACTGAGTTCGTTGCGC
GGCAAGGGCACGCAATTTTTTACATTGTTGTGAGTCCTACTGGCGACTCC
AAGCTGAGAGCGCCATGCTCCCAGGGAAGACTTGCTCTCAAGTGGACTGA
CTCCCCCGCCTGCTGTGTCGGTTGGTTCCACGTCTTGGGATATAGTGCGG
AGTATGCCTCTGGGTTTTGTTCTGTGGTGATTGAATGCACTGGCTATCCA
GGGTCGGACACAGCCAGAAAAGCTGTTCGCTGTTCCGAGATTGGGAATAA
AATGACCATTGGCAGTTGTGTGGAGGCGGGGGTGCAGGAAACCCAGGAAC
ACGAGGAGCGTGCTCTCCACAATTGTATTATTTTGTATGGATCATACGTT
TTACCCTCTTTTTCGGCGCAAAGAGCTGATTCGGAATGAAGAAATGCACC
TTGACAACATGGACGTTGAAAGCGAGAGAGAGAGGAAGAAGGATAGAGCG
CTGCAGTCGTTCCACGCAGGAAGAAGCGTGTCAAGTCCTCTCCTGTGCTG
ATGTACTTGTACTGAGTAATGATTATCTGTATTAGACTGGCTATCTGAAC
GACGAGTTGTCCGCGTAACTTAATTCTTTTTCTTTTTCCTGCTCCTCCCC
CCCCCTCCAGGTTTACAAAGAAAATCTCGTGGAGACCATCTTGCCGTCCA
TCCAGTCCGTCATGACCGCTGTGCTTCACTATAAGAAGATGGGGGGAGAG
GCGAATCTTTACATCAATGATGACGGGCTACAGGTGCGCGATAGAATACA
TTTGATCTAGAAGAAAGAGAGCAAACAAACGAACAAATAGTGCAGATATA
TATATATATATATATATATATATATATTTTTTTCCCTCCTTACCAGAAGC
GAATTTGATCCATCAGGTTCACGAAAACAGACGCTCGTCCAGTGCTTTTT
TCTTTTTTTTTCTCTCCATGATATCAGTAGATGGGTCAAACCAACCATAC
TGTCAGTATTGCTGTTTTTTCAGAGGGTTGTTCTCAATTCCGTCCGGTTC
CGCTCCGTTCGGTTCGGTTCGGTTCGGTTCGGTTATTGATTCTCTTACGC
ATTCATTTAGTAACCACCCTGAGTGACTGTCAGTCAGCCTCCTTCACGAA
GAAATGCAAACCTGACAGGGGGCTCCCGTGGGGCAAATTAATGAAGAGAG
GATTGCTTGAGGCTCCTGACTTGTGTCCATTGTACACGTACACGGTAGTC
AAAACAGGCATCTTTTCCCTCTCTGTTTTTGGAGCACTAGATACTACAAA
AGTATTGGGTCATGTCAGGGGAAGGGCAGATAGCGCAAAGTTGAATGTTT
TTGTTGTAAAGATTATAGTTCTGTTTACTACCATGCATAATTGTTATCTT
TTATAATGAGAACACGATGCTCCCGGGAAAGACTGGCTCTCGAGGGGACA
CCACCTACTCTATGCGGGTCGGTTCTAGGTCTTGGGATGTGGTGCGGAGC
AAGCACTTGGATTTTGTTCTGTCGTAAATTGACTGTCCATCCCGGGTCGG
ACACAGCTAGAAAACTGTTCCGAGAAAGGGACAAAAAAGCCATTGGTCGT
TGTGTAGGGGGCCGGGGTTCAGGAACCTCAGGAACATCAGGAACGTATTT
TCCACAGTAATCAATATATATACATATACCTTCTTTTTTCTCTCTTCGTT
GTTGTTGATTCAATTAAGGTTATCTCGGAGAAAGAACGCAATGCGCGAGT
CTTTGCCTATAAGCGCCACGGAGTTTCGTACGTCGCCCGACCTCCCCCGT
CGATCCGCCCGAGGAAGGGGCTGTTCAAGAAGGCCTCCAACCTTAACTAC
GGCCTTAACGTGGCCGTTCGGGTGGAGGAAATTATGGCGGAATCCGGGGG
CCAGGTCACGGATCCGGTAGAGGTGAGTTGGAGGATGACGCTTCCAAGTA
TGTACTTGCAGCCAAGCTACGGAGTCCTCACTATATCATACGCAAGCTTT
CTTTCCCAGTTTCATCCTTTTCTTCTTGGCTCTTTTTTTACGAGAAAAAC
ACATTAGTCAACAACTGTCGTACAAAATACGCGTGGTCTATATTATTTTT
TGATAAAATTTCTATGCTACTGTATATCATTTGTTGATTCAAATATATGT
ATAAGTATGTATGTGTATGTGTGTGTGTGTGTGTGTGTGTGTGCGTGTGT
GCATGTTATATAGGAAGTAAAGTGCAATTATCTGTGTGGGCATTTTTATT
GTCAAGACTTGTTTGCACATCAAAAAGAAAAAGAAAACGGCTCAGACAAC
TTTGGCTAAACAAGACATGTTTTTTTTTGTTTTTGTTTGCGGAACATTCC
ACAAAGTATTTTACTAATATTACAACAAAAAATCACAGGCTCTTCAGTTG
GTTAATGGAGAGTTCAACGACGAGTTCTTCGCCGGGGGAGACGTTCGCAT
AGGAGACATCGTGCTGCTCGTGGACTCAGACACGAGGGTGCCGGAAGACT
GCCTCTCTAAGAGCTCGGGGGAGTTCGAGCGCTACCCGAAGGTGGGGTTC
ATGCAGTGCAAGACCACCTCCATTCGCATCCACAGCAACTTCTGGGAGAA
TATGATATCGAGGTTTACCAACGACGTGTACAGGTGA
back to top

Coding sequence (CDS) from alignment at H-paniculata_contig3901:192..11428-

>mRNA_H-paniculata_contig3901.10170.1 ID=mRNA_H-paniculata_contig3901.10170.1|Name=mRNA_H-paniculata_contig3901.10170.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=3012bp|location=Sequence derived from alignment at H-paniculata_contig3901:192..11428- (Halopteris paniculata Hal_grac_a_UBK monoicous)
CCCCGCGGCCACGGTTTGGAGCGAGGCCCACCATCGTTCTCTTCAAACGT
CTCTGGTCAATCTTCACGGGGCGGCACGGGCGCGGCAGCTGGCGGTGTCA
TTGACCACCGAAGGAACTATTCCGCTGCCTCTCTTGAGTCCATGGCTCGT
GCTGCTGGAGGCGGCGGTGCGGGTGCGACAGGGTCGTCTTCTCAAGCAGG
GCGAGGAGGGCCTGCTGGGGATGGGGTAGACTCAGAGGCCAGCGATAGTA
AGCACGGCGGCGGCTGGGGGCCCGGAGGTGGAGGAGGGAGCGCGCCGCGG
ATGGTACACCGGGTGGGAATGGAGTGCCTGAGTCCTATCAACGTCGCAAG
AGATGGGCCGTCTAACAGTGCCCCGCGGCCACGGTTTGGAGCGAGGCCCA
CCATCGTTCTCTTCAAACGTCTCTGGTCAATCTTCACGGGGCGGCACGGG
CGCGGCAGCTGGCGGTGTCATTGACCACCGAAGGAACTATTCCGCTGCCT
CTCTTGAGTCCATGGCTCGTGCTGCTGGAGGCGGCGGTGCGGGTGCGACA
GGGTCGTCTTCTCAAGCAGGGCGAGGAGGGCCTGCTGGGGATGGGGTAGA
CTCAGAGGCCAGCGATAGTAAGCACGGCGGCGGCTGGGGGCCCGGAGGTG
GAGGAGGGAGCGCGCCGCGGATGGTACACCGGGTGGGAATGGAGTGCCTG
AGTCCTATCAACGTCGCAAGAGATGGGCCGTCTAACAGTGTCGTAACACC
TCTTCACAGCGGGAGGAGCGCGATGTCCATTCGCTCCGCGACAACTTCTA
TCGCCCCCGCGCAGTATATGCGAGAGGAGATGCTCACCCCGTCCCCGCCG
CCAAACTGGGCTAGCTCGTTCGCTGGCCACTTTGAGAGCAGGGCGGGAAC
GATGGAGTTCAAGGACGAGTCGTAACACCTCTTCACAGCGGGAGGAGCGC
GATGTCCATTCGCTCCGCGACAACTTCTATCGCCCCCGCGCAGTATATGC
GAGAGGAGATGCTCACCCCGTCCCCGCCGCCAAACTGGGCTAGCTCGTTC
GCTGGCCACTTTGAGAGCAGGGCGGGAACGATGGAGTTCAAGGACGAGGA
GGAGGGGTCCCGTGCAGCCTCGCAAATGGACACGCAGCTGGTGGCGGCGA
CCGACAACGGGTGGGCGGAGGTTCGAAAAACGCGCTACATCAACTACGTG
ACGGTGACGCTTACCCATCTCATCATTTTTTATATTCTCGGGAGCCGGGG
ATATATCATAATTCGCGACACTCTCGCTGACCAGAGGAGGGGTCCCGTGC
AGCCTCGCAAATGGACACGCAGCTGGTGGCGGCGACCGACAACGGGTGGG
CGGAGGTTCGAAAAACGCGCTACATCAACTACGTGACGGTGACGCTTACC
CATCTCATCATTTTTTATATTCTCGGGAGCCGGGGATATATCATAATTCG
CGACACTCTCGCTGACCAATACTACTTGCGGTTTGTGGCGTTTATGTACT
ACCTTCCCGCGTACGTGTTTATGCTCTTCAGCATCGATTACCTTCTTGCC
CAGATACTACTTGCGGTTTGTGGCGTTTATGTACTACCTTCCCGCGTACG
TGTTTATGCTCTTCAGCATCGATTACCTTCTTGCCCAGTTTATCTATGCA
TTGGGACCAATTGCGCATATGCAGGAGAACTCCAAGTACTTCAGCAGCAA
GCCTTGCCCTCGCCCGGCTGTAATGCCCCGCGTTACCATCCAGATGCCTT
TTATCTATGCATTGGGACCAATTGCGCATATGCAGGAGAACTCCAAGTAC
TTCAGCAGCAAGCCTTGCCCTCGCCCGGCTGTAATGCCCCGCGTTACCAT
CCAGATGCCTGTTTACAAAGAAAATCTCGTGGAGACCATCTTGCCGTCCA
TCCAGTCCGTCATGACCGCTGTGCTTCACTATAAGAAGATGGGGGGAGAG
GCGAATCTTTACATCAATGATGACGGGCTACAGGTTTACAAAGAAAATCT
CGTGGAGACCATCTTGCCGTCCATCCAGTCCGTCATGACCGCTGTGCTTC
ACTATAAGAAGATGGGGGGAGAGGCGAATCTTTACATCAATGATGACGGG
CTACAGGTTATCTCGGAGAAAGAACGCAATGCGCGAGTCTTTGCCTATAA
GCGCCACGGAGTTTCGTACGTCGCCCGACCTCCCCCGTCGATCCGCCCGA
GGAAGGGGCTGTTCAAGAAGGCCTCCAACCTTAACTACGGCCTTAACGTG
GCCGTTCGGGTGGAGGAAATTATGGCGGAATCCGGGGGCCAGGTCACGGA
TCCGGTAGAGGTTATCTCGGAGAAAGAACGCAATGCGCGAGTCTTTGCCT
ATAAGCGCCACGGAGTTTCGTACGTCGCCCGACCTCCCCCGTCGATCCGC
CCGAGGAAGGGGCTGTTCAAGAAGGCCTCCAACCTTAACTACGGCCTTAA
CGTGGCCGTTCGGGTGGAGGAAATTATGGCGGAATCCGGGGGCCAGGTCA
CGGATCCGGTAGAGGCTCTTCAGTTGGTTAATGGAGAGTTCAACGACGAG
TTCTTCGCCGGGGGAGACGTTCGCATAGGAGACATCGTGCTGCTCGTGGA
CTCAGACACGAGGGTGCCGGAAGACTGCCTCTCTAAGAGCTCGGGGGAGT
TCGAGCGCTACCCGAAGGTGGGGTTCATGCAGTGCAAGACCACCTCCATT
CGCATCCACAGCAACTTCTGGGAGAATATGATATCGAGGTTTACCAACGA
CGTGTACAGGTGAGCTCTTCAGTTGGTTAATGGAGAGTTCAACGACGAGT
TCTTCGCCGGGGGAGACGTTCGCATAGGAGACATCGTGCTGCTCGTGGAC
TCAGACACGAGGGTGCCGGAAGACTGCCTCTCTAAGAGCTCGGGGGAGTT
CGAGCGCTACCCGAAGGTGGGGTTCATGCAGTGCAAGACCACCTCCATTC
GCATCCACAGCAACTTCTGGGAGAATATGATATCGAGGTTTACCAACGAC
GTGTACAGGTGA
back to top