mRNA_H-paniculata_contig38913.10151.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig38913.10151.1
Unique NamemRNA_H-paniculata_contig38913.10151.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
BLAST of mRNA_H-paniculata_contig38913.10151.1 vs. uniprot
Match: A0A7D9D5L2_PARCT (Uncharacterized protein n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A7D9D5L2_PARCT)

HSP 1 Score: 206 bits (523), Expect = 3.540e-61
Identity = 109/273 (39.93%), Postives = 158/273 (57.88%), Query Frame = 1
Query:   85 IDEFKHNISQRFRMKDLGSLSRVLEIEVRRDHPNGTRTISQGSYIHEVLKRYGFEECRGVSTPVEGKVKISALKSADKPTDQNSRGKSGNSTKYGGMVGSLMYASTGPRPDIAYAVHQAARRMEDPCREDFSTGKRLFHYFSTVPDLSIMFGGKSNGQGLQRFVDADWAEDVEDRKSTTGYVFKLNGGAISWCSRKQQLVTWSSTEAEDVATGEAGKETVYLRELLGSIGFGCMGSTTLFEDNKSAINLGKGSGAHCRTKHIGVRWHGIREWI 903
            + E K  I  +F++ D+G +  VL + +RRD   G  TISQ +Y+  +LKR+G E+C+ VSTP+E       L   + PT+ N         +Y  ++G L Y +T  RPD+A AV   ++ M  P +E +   KR+  Y     +  ++F GKS    L  + DADWA D++ R+ST+GYVF++NG  +SWCS++Q  VT S+TEAE VA   A +E V+LR LL  IG      + + EDN+ AI L K    H RTKHI V +H +RE +
Sbjct:    2 LSEEKKLIGLKFKVDDMGEVKHVLGMVIRRDRRKGKMTISQSTYLQGILKRFGMEQCKPVSTPLEPGKHFQELPDDENPTNTN---------EYQKLIGCLTYVTTATRPDLASAVGILSKFMSKPSKEHWHGAKRVLRYIKDTVNYGLVFEGKSTKCSLIGYSDADWANDLDTRRSTSGYVFQINGSTVSWCSKRQPCVTRSTTEAEYVALSHATQEIVWLRRLLNDIGEKQDQPSIMNEDNQGAIELSKNPRFHNRTKHIDVAYHFVREKV 265          
BLAST of mRNA_H-paniculata_contig38913.10151.1 vs. uniprot
Match: H3GB17_PHYRM (Reverse transcriptase Ty1/copia-type domain-containing protein n=2 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GB17_PHYRM)

HSP 1 Score: 207 bits (527), Expect = 1.370e-60
Identity = 114/295 (38.64%), Postives = 175/295 (59.32%), Query Frame = 1
Query:   34 LVAIYVDDLVIAGR-REKIDEFKHNISQRFRMKDLGSLSRVLEIEVRRDHPNGTRTISQGSYIHEVLKRYGFEECRGVSTPVEGKVKISALKSADKPTDQNSRGKSGNSTKYGGMVGSLMYASTGPRPDIAYAVHQAARRMEDPCREDFSTGKRLFHYFSTVPDLSIMFGGKSNGQGLQRFVDADWAEDVEDRKSTTGYVFKLNGGAISWCSRKQQLVTWSSTEAEDVATGEAGKETVYLRELLGSIGFGCMGSTTLFEDNKSAINLGKGSGAHCRTKHIGVRWHGIREWIREGI 915
            ++ +YVDDL+I  R + +I E K  + + F +K+LG L   L IE+ R+  + T  ++Q +YI  + +++G E+C+ V TP +   K+  +K A+                Y  +VG+LMY +T  RPDIA AV + A+  E   +  +   KR+  Y  T  DL ++F G + G+ L  + DA WA D++ R+STTGYVF LNG AISW S++Q  V  SSTEAE +A   A +E V+LR+LL  +G  C+ +TT+F+DN+  I L K    H RTKHI +++H +RE + + +
Sbjct:   88 IIIVYVDDLMIFSRTKAEIGEIKKALKREFSIKELGELKYCLGIEIHRNRDDKTIVMNQRAYIQRLAEKFGVEKCKAVHTPADSNSKL--VKPAEDEVFVPRY-------PYRELVGALMYLATCTRPDIAQAVGEVAKFCERYNKSHWVAAKRILKYLKTTQDLGLVFNGGTKGE-LIGYADASWAGDLDTRRSTTGYVFFLNGSAISWKSKRQPTVATSSTEAEYMALYNATQEAVWLRQLLLDVGCECVAATTIFQDNQGCIALAKNPAYHSRTKHIDLKYHFLREKVEDKV 372          
BLAST of mRNA_H-paniculata_contig38913.10151.1 vs. uniprot
Match: A0A0S7JP25_9TELE (POLX n=2 Tax=Poeciliopsis prolifica TaxID=188132 RepID=A0A0S7JP25_9TELE)

HSP 1 Score: 206 bits (523), Expect = 1.950e-60
Identity = 116/294 (39.46%), Postives = 167/294 (56.80%), Query Frame = 1
Query:   34 LVAIYVDDLV-IAGRREKIDEFKHNISQRFRMKDLGSLSRVLEIEVRRDHPNGTRTISQGSYIHEVLKRYGFEECRGVSTPVEGKVKISALKSADKPTDQNSRGKSGNSTKYGGMVGSLMYASTGPRPDIAYAVHQAARRMEDPCREDFSTGKRLFHYFSTVPDLSIMFGGKSNGQGLQRFVDADWAEDVEDRKSTTGYVFKLNGGAISWCSRKQQLVTWSSTEAEDVATGEAGKETVYLRELLGSIGFGCMGSTTLFEDNKSAINLGKGSGAHCRTKHIGVRWHGIREWIREG 912
            ++A+YVDDL+ I    E +DE K  + +R++MKDLG LS +L I V +D       + Q  YI  +LK+YG ++   V+TP +  VK+        P D ++         Y  MVGSL+YA+   RPDIA AV   ++   +P     +  KR+  Y     +L++ F    N + L  F DADWA D++DR STTG +F L+GGA+SW S+KQ  V  S+ EAE VA  +A +E  +LR LL  +G      T + EDN+ AI + K    H RTKHI +R+H IRE +++G
Sbjct:   49 IIAVYVDDLMLITESTESMDELKLTLQERYKMKDLGELSYILGISVIQDKEKNCICLHQKQYIETILKKYGMDKANPVATPADISVKLKKDDGVSNPVDPST---------YQSMVGSLLYAAMTTRPDIAQAVSAVSKFNANPNTAHLTAVKRILRYLKGTVNLALKFDCAGN-KDLIGFSDADWAGDLDDRHSTTGNIFLLSGGAVSWLSKKQATVALSTAEAEYVALSQAAQEGTWLRRLLNDLGM-VTKPTVILEDNQGAIAIAKNPVDHSRTKHIDIRYHYIRECVQDG 331          
BLAST of mRNA_H-paniculata_contig38913.10151.1 vs. uniprot
Match: A0A1M2VV58_TRAPU (Retrovirus-related Pol polyprotein from transposon TNT 1-94 (Fragment) n=1 Tax=Trametes pubescens TaxID=154538 RepID=A0A1M2VV58_TRAPU)

HSP 1 Score: 216 bits (550), Expect = 9.050e-60
Identity = 130/310 (41.94%), Postives = 172/310 (55.48%), Query Frame = 1
Query:   31 LLVAIYVDDLVIAGR-REKIDEFKHNISQRFRMKDLGSLSRVLEIEVRRDHPNGTRTISQGSYIHEVLKRYGFEECRGVSTPVEGKVKISALKSAD---KPTDQNSRGKSGNSTKYGGMVGSLMYASTGPRPDIAYAVHQAARRMEDPCREDFSTGKRLFHYFSTVPDLSIMF---GGKSNGQGLQRFVDADWAEDVEDRKSTTGYVFKLNGGAISWCSRKQQLVTWSSTEAEDVATGEAGKETVYLRELLGSIGF---------GCMGSTTLFEDNKSAINLGKGSGAHCRTKHIGVRWHGIREWIREG 912
            L++A+YVDD++IAG  R  ID FK  +S+RF M DLGS   +L +E+ RD    T +ISQ  YI ++L+R+G   CR VSTP+E  +K+  L  A    KP              Y   +GSLMYA  G RPD+A+AV   ++    P  + +    R+F Y     DL + +      SNG     + DADWA DV DR+ST+G  F L+GGA+SW S+KQQ +  SSTEAE VA   A KE ++LR LL  +           G   +  L  DN+SA+ L K S  H RTKHI VR H IR+ I  G
Sbjct: 1178 LIIALYVDDMLIAGNDRTTIDAFKSTLSERFEMTDLGSARWILGMEIERDRARHTLSISQAQYIEKILERHGMANCRPVSTPMEPNLKLEKLSEATIDPKP--------------YQSALGSLMYAMLGSRPDLAFAVGALSKHSATPGPQHWKALMRVFRYLRGSSDLCLSYKPDSEHSNGATPLGYCDADWAGDVNDRRSTSGQAFFLHGGAVSWQSKKQQSIAQSSTEAEYVALASAAKEALWLRALLDDLAIPASISRSSPGSKVTPLLLVDNQSAMALAKNSTFHDRTKHIAVRHHFIRDEIERG 1473          
BLAST of mRNA_H-paniculata_contig38913.10151.1 vs. uniprot
Match: A0A438EU98_VITVI (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=7 Tax=Vitis vinifera TaxID=29760 RepID=A0A438EU98_VITVI)

HSP 1 Score: 202 bits (514), Expect = 2.500e-59
Identity = 120/297 (40.40%), Postives = 174/297 (58.59%), Query Frame = 1
Query:   31 LLVAIYVDDLVIAGRR-EKIDEFKHNISQRFRMKDLGSLSRVLEIEVRRDHPNGTRTISQGSYIHEVLKRYGFEECRGVSTPVEGKVKISALKSADKPTDQNSRGKSGNSTKYGGMVGSLMYASTGPRPDIAYAVHQAARRMEDPCREDFSTGKRLFHYFSTVPDLSIMFGGKSNGQGLQRFVDADWAEDVEDRKSTTGYVFKLNGGAISWCSRKQQLVTWSSTEAEDVATGEAGKETVYLRELLGSIGFGC-MGSTTLFEDNKSAINLGKGSGAHCRTKHIGVRWHGIREWIREGI 915
            +++ +YVDD++IAG   EKI+  K  +S++F MKDLG+  ++L + + RD  NGT  +SQ  Y+ +VL R+   E + VSTP+    K+S  +S     +++   K      Y   +GSLMYA    RPDIA+AV   +R M  P ++ +   K +  Y     D  + F G S    LQ +VDAD+A D++ RKSTTG+VF L G AISW S  Q++VT S+TEAE VA  EAGKE ++L   L  +G    MG   L  D++SAI L K S  H ++KHI  ++H IR  + + +
Sbjct:   25 IILLLYVDDMLIAGSDIEKINNLKKQLSKQFAMKDLGAAKQILGMRIIRDKANGTLKLSQSEYVKKVLSRFNMNEAKPVSTPLGSHFKLSKEQSPKTEEERDHMSK----VPYASAIGSLMYAMVCTRPDIAHAVGVVSRFMSRPGKQHWEAVKWILRYLKGSLDTCLCFTGAS--LKLQGYVDADFAGDIDSRKSTTGFVFTLGGTAISWTSNLQKIVTLSTTEAEYVAATEAGKEMIWLHGFLDELGKKQEMG--ILHSDSQSAIFLAKNSAFHSKSKHIQTKYHFIRYLVEDKL 313          
BLAST of mRNA_H-paniculata_contig38913.10151.1 vs. uniprot
Match: Q6BCY1_IPOBA (Gag-Pol n=1 Tax=Ipomoea batatas TaxID=4120 RepID=Q6BCY1_IPOBA)

HSP 1 Score: 214 bits (545), Expect = 4.020e-59
Identity = 117/307 (38.11%), Postives = 191/307 (62.21%), Query Frame = 1
Query:    4 YRDGGGETNLLVAIYVDDLVIAG-RREKIDEFKHNISQRFRMKDLGSLSRVLEIEVRRDHPNGTRTISQGSYIHEVLKRYGFEECRGVSTPVEGKVKISALKSADKPTDQNSRGKSGNSTKYGGMVGSLMYASTGPRPDIAYAVHQAARRMEDPCREDFSTGKRLFHYFSTVPDLSIMFGGKS---NGQGLQRFVDADWAEDVEDRKSTTGYVFKLNGGAISWCSRKQQLVTWSSTEAEDVATGEAGKETVYLRELLGSIGFGCMGSTTLFEDNKSAINLGKGSGAHCRTKHIGVRWHGIREWIREG 912
            ++  G +  +++ +YVDD+++AG  ++ IDE K  +++ F MKDLG  +++L +++ RD  N    +SQ +Y+ ++L R+  ++C+ +STP+   +K+S+  S   P+++  R +      Y   VGSLM+A    RPDIA AV   +R M +P RE ++  KR+  Y     D+++ +GG     NG     +VD+D+A D++  KSTTGYVFK+ GGA+SW S+ Q +V  S+TEAE VA  +A KE ++L+ LL  +G       +LF D++SA++L +    H RTKHI V++H IRE ++EG
Sbjct:  964 FKRFGKDNFVILLLYVDDMLVAGPNKDHIDELKAQLAREFEMKDLGPANKILGMQIHRDRGNRKIWLSQKNYLKKILSRFSMQDCKSISTPLPINLKVSSSMS---PSNEEGRMEMSR-VPYASAVGSLMFAMICTRPDIAQAVGVVSRYMANPGREHWNCVKRILRYIKGTSDVALCYGGSDFIING-----YVDSDYAGDLDKSKSTTGYVFKVAGGAVSWVSKLQAVVATSTTEAEYVAATQASKEAIWLKMLLEELGHK-QEFVSLFCDSQSALHLARNPAFHSRTKHIRVQYHFIREKVKEG 1260          
BLAST of mRNA_H-paniculata_contig38913.10151.1 vs. uniprot
Match: A0A6A3CT26_HIBSY (Putative galacturonosyltransferase 6 n=1 Tax=Hibiscus syriacus TaxID=106335 RepID=A0A6A3CT26_HIBSY)

HSP 1 Score: 213 bits (542), Expect = 1.070e-58
Identity = 116/307 (37.79%), Postives = 190/307 (61.89%), Query Frame = 1
Query:    4 YRDGGGETNLLVAIYVDDLVIAG-RREKIDEFKHNISQRFRMKDLGSLSRVLEIEVRRDHPNGTRTISQGSYIHEVLKRYGFEECRGVSTPVEGKVKISALKSADKPTDQNSRGKSGNSTKYGGMVGSLMYASTGPRPDIAYAVHQAARRMEDPCREDFSTGKRLFHYFSTVPDLSIMFGGKS---NGQGLQRFVDADWAEDVEDRKSTTGYVFKLNGGAISWCSRKQQLVTWSSTEAEDVATGEAGKETVYLRELLGSIGFGCMGSTTLFEDNKSAINLGKGSGAHCRTKHIGVRWHGIREWIREG 912
            ++  G    +++ +YVDD+++AG  ++ I+E K  +++ F MKDLGS +++L +++ RD  N    +SQ +Y+ ++L R+  ++C+ +STP+    K+S+  S   P+ +  R +      Y   VGSLM+A    RPDIA AV   +R M +P +E ++T KR+  Y     ++++ +GG +   NG     +VD+D+A D++  KSTTGYVFK+ GGA+SW S+ Q +V  S+TEAE VA  +A KE ++L+ LL  +G       +LF D++SA++L +    H RTKHI V++H IRE + EG
Sbjct:  898 FKRSGDNDFVILLLYVDDMLVAGPNKDHIEELKAQLAREFEMKDLGSANKILGMQIHRDRSNRKIWLSQKNYLKKILSRFSMQDCKPISTPLPINFKLSSSMS---PSSEEERMEMSR-VPYASAVGSLMFAMICTRPDIAQAVGVVSRYMANPGKEHWNTVKRILRYIKGTSNVALCYGGSNLLING-----YVDSDYAGDLDKSKSTTGYVFKVAGGAVSWVSKLQSVVATSTTEAEYVAATQASKEAIWLKMLLEELGHN-QEYVSLFCDSQSALHLARNPAFHSRTKHIRVQYHFIREKVEEG 1194          
BLAST of mRNA_H-paniculata_contig38913.10151.1 vs. uniprot
Match: H3GB69_PHYRM (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GB69_PHYRM)

HSP 1 Score: 199 bits (506), Expect = 1.400e-58
Identity = 108/286 (37.76%), Postives = 168/286 (58.74%), Query Frame = 1
Query:   58 LVIAGRREKIDEFKHNISQRFRMKDLGSLSRVLEIEVRRDHPNGTRTISQGSYIHEVLKRYGFEECRGVSTPVEGKVKISALKSADKPTDQNSRGKSGNSTKYGGMVGSLMYASTGPRPDIAYAVHQAARRMEDPCREDFSTGKRLFHYFSTVPDLSIMFGGKSNGQGLQRFVDADWAEDVEDRKSTTGYVFKLNGGAISWCSRKQQLVTWSSTEAEDVATGEAGKETVYLRELLGSIGFGCMGSTTLFEDNKSAINLGKGSGAHCRTKHIGVRWHGIREWIREGI 915
            ++ +  + +I E K  + + F +K+LG L   L IE+ R+  + T  ++Q +YI  + +++G E+C+ V TP +   K+       KP++            Y  +VG+LMY +T  RPDIA AV + A+  E   +  +   KR+  Y  T  DL ++F G + G+ L  + DA+WA D++ R+STTGYVF LNG AISW S++Q  V  SSTEAE +A   A +E V+LR+LL  +G  C+G+TT F+DN+  I L K    H RTKHI +++H +RE + + +
Sbjct:    1 MIFSRTKAEIGEIKKALKREFSIKELGELKYCLGIEIHRNRDDKTIVMNQRAYIQRLAEKFGVEKCKAVHTPADSNSKLV------KPSEDEDFVPR---YPYRELVGALMYLATCTRPDIAQAVGEVAKFCERYNKSHWVAAKRILKYLKTTQDLGLVFNGGTKGE-LIGYADANWAGDLDTRRSTTGYVFFLNGSAISWKSKRQPTVATSSTEAEYMALYNATQEAVWLRQLLLDVGCECVGATTFFQDNQGCIALAKNPAYHSRTKHIDLKYHFLREKVEDKV 276          
BLAST of mRNA_H-paniculata_contig38913.10151.1 vs. uniprot
Match: A0A6D2JBX5_9BRAS (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Microthlaspi erraticum TaxID=1685480 RepID=A0A6D2JBX5_9BRAS)

HSP 1 Score: 201 bits (510), Expect = 2.040e-58
Identity = 117/300 (39.00%), Postives = 169/300 (56.33%), Query Frame = 1
Query:   19 GETNLLVAIYVDDLVIAGRR-EKIDEFKHNISQRFRMKDLGSLSRVLEIEVRRDHPNGTRTISQGSYIHEVLKRYGFEECRGVSTPVEGKVKISALKSADKPTDQNSRGKSGNSTKYGGMVGSLMYASTGPRPDIAYAVHQAARRMEDPCREDFSTGKRLFHYFSTVPDLSIMFGGKSNGQGLQRFVDADWAEDVEDRKSTTGYVFKLNGGAISWCSRKQQLVTWSSTEAEDVATGEAGKETVYLRELLGSIGFGCMGSTTLFEDNKSAINLGKGSGAHCRTKHIGVRWHGIREWIREGI 915
            G++ L+V++YVDDL+  G     ++EFK ++ + F M DLG +   L +EV +D       I+Q  Y  E LK+YG E C  V  P+    K+S     D          + + T +  +VGSL Y  T  RPD+ Y+V+  +R ME+P  +     KR+  Y        I +  +  G+ L  FVD+D+A DV+DRKST+GYVF L GGA+SW S+KQ +VT S+TEAE VA      + ++LR +LG IG+     TTLF DN S I L K    H R+KHI VR++ +R+ + E +
Sbjct:   52 GDSILIVSLYVDDLIYTGNSLTMLEEFKQSMMKEFAMTDLGKMKFFLGVEVIQDGRG--IFINQQKYAEETLKKYGMEGCNAVKNPIVPGNKLSRAGGGD----------AADPTMFKQLVGSLRYL-TATRPDLIYSVNLVSRYMENPNEQHLLAAKRILRYVQGTCGFGIRYK-QGEGEKLVGFVDSDYAGDVDDRKSTSGYVFMLGGGAVSWASKKQPIVTLSTTEAEFVAAAYGACQAMWLRNILGEIGWAQEEGTTLFCDNSSTIKLSKNPVLHGRSKHIHVRYYFLRDLVNEEV 337          
BLAST of mRNA_H-paniculata_contig38913.10151.1 vs. uniprot
Match: A0A7D9M6E1_PARCT (Reverse transcriptase Ty1/copia-type domain-containing protein (Fragment) n=2 Tax=Paramuricea clavata TaxID=317549 RepID=A0A7D9M6E1_PARCT)

HSP 1 Score: 200 bits (509), Expect = 3.530e-58
Identity = 108/294 (36.73%), Postives = 179/294 (60.88%), Query Frame = 1
Query:   34 LVAIYVDDLVIAGRR-EKIDEFKHNISQRFRMKDLGSLSRVLEIEVRRDHPNGTRTISQGSYIHEVLKRYGFEECRGVSTPVEGKVK-ISALKSADKPTDQNSRGKSGNSTKYGGMVGSLMYASTGPRPDIAYAVHQAARRMEDPCREDFSTGKRLFHYFSTVPDLSIMFGGKSNGQGLQRFVDADWAEDVEDRKSTTGYVFKLNGGAISWCSRKQQLVTWSSTEAEDVATGEAGKETVYLRELLGSIGFGCMGSTTLFEDNKSAINLGKGSGAHCRTKHIGVRWHGIREWIRE 909
            +VAI+VDD+++AG+  EKI + K +I++RF++KD+G L  +L ++V ++  +G   I Q +Y   ++K+YG E C+ V TPV+   K +SA++ ++            N  +Y   VGSL+Y S+  RPDI +AV+  A+   +   E ++  KR+F Y     +  +++   +N   +  F DADWA D+ DRKST+GY F++NG A+SW S+KQ  V  S+ EAE VA   A +E +++R+LL  +        T++EDN+SAI + K    H R+KHI +++H +R+ + +
Sbjct:   63 VVAIHVDDIILAGKTDEKIAKVKESIAERFQVKDMGELKYILGLQVIQE--DGKVWIGQPTYTASIIKKYGMENCKPVETPVDLSSKLVSAMEDSELF----------NKEEYQSAVGSLLYLSSATRPDITFAVNNVAKFSANFTNEHWTAVKRIFRYLKKTVNYGLLYSENANPDCVG-FSDADWAGDLNDRKSTSGYTFQINGAAVSWRSKKQTCVALSTAEAEYVALSAAAQEALWMRQLLTDLNVNIDKPMTIYEDNQSAIAMSKNPQFHGRSKHIDIKYHFVRDQVEK 343          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig38913.10151.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7D9D5L2_PARCT3.540e-6139.93Uncharacterized protein n=1 Tax=Paramuricea clavat... [more]
H3GB17_PHYRM1.370e-6038.64Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A0S7JP25_9TELE1.950e-6039.46POLX n=2 Tax=Poeciliopsis prolifica TaxID=188132 R... [more]
A0A1M2VV58_TRAPU9.050e-6041.94Retrovirus-related Pol polyprotein from transposon... [more]
A0A438EU98_VITVI2.500e-5940.40Retrovirus-related Pol polyprotein from transposon... [more]
Q6BCY1_IPOBA4.020e-5938.11Gag-Pol n=1 Tax=Ipomoea batatas TaxID=4120 RepID=Q... [more]
A0A6A3CT26_HIBSY1.070e-5837.79Putative galacturonosyltransferase 6 n=1 Tax=Hibis... [more]
H3GB69_PHYRM1.400e-5837.76Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6D2JBX5_9BRAS2.040e-5839.00Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A7D9M6E1_PARCT3.530e-5836.73Reverse transcriptase Ty1/copia-type domain-contai... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig38913contigH-paniculata_contig38913:253..1218 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeFungi
Seed ortholog score206.5
Seed ortholog evalue1.8e-50
Seed eggNOG ortholog5111.M1W6X0
Hectar predicted targeting categoryother localisation
EggNOG free text desc.transposition, RNA-mediated
EggNOG OGs21T6K@147550,38V3R@33154,3G6JD@34397,3Q0A2@4751,3RQRT@4890,3TV77@5125,COG2801@1,KOG0017@2759
COG Functional cat.L
Best tax levelClavicipitaceae
Best eggNOG OGNA|NA|NA
Exons2
Model size918
Cds size918
Stop1
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930193.9833584-CDS-H-paniculata_contig38913:252..5841622930193.9833584-CDS-H-paniculata_contig38913:252..584Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig38913 253..584 +
1691481185.8606205-CDS-H-paniculata_contig38913:252..5841691481185.8606205-CDS-H-paniculata_contig38913:252..584Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig38913 253..584 +
1622930193.9983635-CDS-H-paniculata_contig38913:632..12181622930193.9983635-CDS-H-paniculata_contig38913:632..1218Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig38913 633..1218 +
1691481185.8697817-CDS-H-paniculata_contig38913:632..12181691481185.8697817-CDS-H-paniculata_contig38913:632..1218Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig38913 633..1218 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig38913.10151.1prot_H-paniculata_contig38913.10151.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig38913 253..1218 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig38913.10151.1

>prot_H-paniculata_contig38913.10151.1 ID=prot_H-paniculata_contig38913.10151.1|Name=mRNA_H-paniculata_contig38913.10151.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=306bp
VYRDGGGETNLLVAIYVDDLVIAGRREKIDEFKHNISQRFRMKDLGSLSR
VLEIEVRRDHPNGTRTISQGSYIHEVLKRYGFEECRGVSTPVEGKVKISA
LKSADKPTDQNSRGKSGNSTKYGGMVGSLMYASTGPRPDIAYAVHQAARR
MEDPCREDFSTGKRLFHYFSTVPDLSIMFGGKSNGQGLQRFVDADWAEDV
EDRKSTTGYVFKLNGGAISWCSRKQQLVTWSSTEAEDVATGEAGKETVYL
RELLGSIGFGCMGSTTLFEDNKSAINLGKGSGAHCRTKHIGVRWHGIREW
IREGI*
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mRNA from alignment at H-paniculata_contig38913:253..1218+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig38913.10151.1 ID=mRNA_H-paniculata_contig38913.10151.1|Name=mRNA_H-paniculata_contig38913.10151.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=966bp|location=Sequence derived from alignment at H-paniculata_contig38913:253..1218+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
GTTTACCGCGACGGTGGGGGAGAAACAAACCTTCTGGTGGCCATCTACGT TGACGACCTGGTCATTGCTGGCCGTCGTGAGAAAATAGACGAGTTCAAGC ATAACATAAGTCAGCGTTTTAGGATGAAAGACTTGGGATCTCTCTCGCGC GTGTTGGAAATAGAAGTACGACGTGACCACCCTAATGGTACCAGAACCAT CTCGCAGGGTAGCTACATCCACGAGGTACTGAAAAGATACGGTTTCGAGG AGTGTCGAGGAGTATCCACCCCTGTAGAGGGAAAAGTGAAGATTTCGGCA CTCAAGTCGGCTGACAAGCCCACCGACCAGAAGTCACTTGGAGCTGTACT GTCAGACATAGGCGCAGGAGTACAAGAAAGCAGCAGAGGGAAAAGTGGCA ATTCAACTAAATACGGAGGCATGGTAGGATCTCTCATGTACGCCTCGACA GGACCTAGACCTGATATAGCATACGCGGTACACCAAGCAGCACGTCGTAT GGAGGACCCATGTCGAGAAGACTTCAGTACAGGCAAGCGCCTTTTTCATT ATTTCAGTACTGTGCCTGACCTCAGCATTATGTTCGGCGGTAAGAGTAAT GGTCAAGGTCTGCAAAGATTCGTTGATGCCGATTGGGCGGAAGATGTCGA GGACCGAAAGTCCACAACAGGATACGTTTTCAAGCTGAACGGTGGTGCGA TAAGTTGGTGCTCTAGGAAGCAACAGTTAGTCACTTGGTCGAGTACAGAG GCAGAGGACGTTGCTACAGGAGAAGCGGGAAAGGAGACGGTATATCTTAG GGAGTTACTAGGATCGATAGGTTTCGGATGCATGGGGAGCACGACATTAT TTGAGGACAATAAATCAGCTATTAATCTCGGTAAGGGATCTGGCGCACAC TGTAGGACAAAGCACATCGGAGTGCGCTGGCACGGGATTCGAGAGTGGAT TCGGGAAGGAATTTAG
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Coding sequence (CDS) from alignment at H-paniculata_contig38913:253..1218+

>mRNA_H-paniculata_contig38913.10151.1 ID=mRNA_H-paniculata_contig38913.10151.1|Name=mRNA_H-paniculata_contig38913.10151.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1836bp|location=Sequence derived from alignment at H-paniculata_contig38913:253..1218+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
GTTTACCGCGACGGTGGGGGAGAAACAAACCTTCTGGTGGCCATCTACGT
TGACGACCTGGTCATTGCTGGCCGTCGTGAGAAAATAGACGAGTTCAAGC
ATAACATAAGTCAGCGTTTTAGGATGAAAGACTTGGGATCTCTCTCGCGC
GTGTTGGAAATAGAAGTACGACGTGACCACCCTAATGGTACCAGAACCAT
CTCGCAGGGTAGCTACATCCACGAGGTACTGAAAAGATACGGTTTCGAGG
AGTGTCGAGGAGTATCCACCCCTGTAGAGGGAAAAGTGAAGATTTCGGCA
CTCAAGTCGGCTGACAAGCCCACCGACCAGAAGTTTACCGCGACGGTGGG
GGAGAAACAAACCTTCTGGTGGCCATCTACGTTGACGACCTGGTCATTGC
TGGCCGTCGTGAGAAAATAGACGAGTTCAAGCATAACATAAGTCAGCGTT
TTAGGATGAAAGACTTGGGATCTCTCTCGCGCGTGTTGGAAATAGAAGTA
CGACGTGACCACCCTAATGGTACCAGAACCATCTCGCAGGGTAGCTACAT
CCACGAGGTACTGAAAAGATACGGTTTCGAGGAGTGTCGAGGAGTATCCA
CCCCTGTAGAGGGAAAAGTGAAGATTTCGGCACTCAAGTCGGCTGACAAG
CCCACCGACCAGAACAGCAGAGGGAAAAGTGGCAATTCAACTAAATACGG
AGGCATGGTAGGATCTCTCATGTACGCCTCGACAGGACCTAGACCTGATA
TAGCATACGCGGTACACCAAGCAGCACGTCGTATGGAGGACCCATGTCGA
GAAGACTTCAGTACAGGCAAGCGCCTTTTTCATTATTTCAGTACTGTGCC
TGACCTCAGCATTATGTTCGGCGGTAAGAGTAATGGTCAAGGTCTGCAAA
GATTCGTTGATGCCGATTGGGCGGAAGATGTCGAGGACCGAAAGTCCACA
ACAGGATACGTTTTCAAGCTGAACGGTGGTGCGATAAGTTGGTGCTCTAG
GAAGCAACAGTTAGTCACTTGGTCGAGTACAGAGGCAGAGGACGTTGCTA
CAGGAGAAGCGGGAAAGGAGACGGTATATCTTAGGGAGTTACTAGGATCG
ATAGGTTTCGGATGCATGGGGAGCACGACATTATTTGAGGACAATAAATC
AGCTATTAATCTCGGTAAGGGATCTGGCGCACACTGTAGGACAAAGCACA
TCGGAGTGCGCTGGCACGGGATTCGAGAGTGGATTCGGGAAGGAATTTAG
CAGCAGAGGGAAAAGTGGCAATTCAACTAAATACGGAGGCATGGTAGGAT
CTCTCATGTACGCCTCGACAGGACCTAGACCTGATATAGCATACGCGGTA
CACCAAGCAGCACGTCGTATGGAGGACCCATGTCGAGAAGACTTCAGTAC
AGGCAAGCGCCTTTTTCATTATTTCAGTACTGTGCCTGACCTCAGCATTA
TGTTCGGCGGTAAGAGTAATGGTCAAGGTCTGCAAAGATTCGTTGATGCC
GATTGGGCGGAAGATGTCGAGGACCGAAAGTCCACAACAGGATACGTTTT
CAAGCTGAACGGTGGTGCGATAAGTTGGTGCTCTAGGAAGCAACAGTTAG
TCACTTGGTCGAGTACAGAGGCAGAGGACGTTGCTACAGGAGAAGCGGGA
AAGGAGACGGTATATCTTAGGGAGTTACTAGGATCGATAGGTTTCGGATG
CATGGGGAGCACGACATTATTTGAGGACAATAAATCAGCTATTAATCTCG
GTAAGGGATCTGGCGCACACTGTAGGACAAAGCACATCGGAGTGCGCTGG
CACGGGATTCGAGAGTGGATTCGGGAAGGAATTTAG
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