prot_H-paniculata_contig38845.10138.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig38845.10138.1
Unique Nameprot_H-paniculata_contig38845.10138.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length45
Homology
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BLAST of mRNA_H-paniculata_contig38845.10138.1 vs. uniprot
Match: A0A6H5JSF7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSF7_9PHAE)

HSP 1 Score: 81.3 bits (199), Expect = 1.580e-17
Identity = 39/45 (86.67%), Postives = 43/45 (95.56%), Query Frame = 0 
Query:    1 QVGKELFIEATADQLILRTLNDAKSAFAAFYFNDAGGFFESFRQG 45
            QVGKELFIE T DQLILRTLNDAKSAFAAFYF+D+GGFFE+FR+G
Sbjct:   30 QVGKELFIETTGDQLILRTLNDAKSAFAAFYFSDSGGFFETFRRG 74
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BLAST of mRNA_H-paniculata_contig38845.10138.1 vs. uniprot
Match: D8LT46_ECTSI (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LT46_ECTSI)

HSP 1 Score: 81.6 bits (200), Expect = 5.930e-17
Identity = 39/45 (86.67%), Postives = 43/45 (95.56%), Query Frame = 0 
Query:    1 QVGKELFIEATADQLILRTLNDAKSAFAAFYFNDAGGFFESFRQG 45
            +VGKELFIE T DQLILRTLNDAKSAFAAFYFND+GGFFE+FR+G
Sbjct:   75 KVGKELFIETTGDQLILRTLNDAKSAFAAFYFNDSGGFFETFRRG 119
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BLAST of mRNA_H-paniculata_contig38845.10138.1 vs. uniprot
Match: A0A835ZGY8_9STRA (Rad9-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZGY8_9STRA)

HSP 1 Score: 57.4 bits (137), Expect = 2.130e-8
Identity = 29/45 (64.44%), Postives = 36/45 (80.00%), Query Frame = 0 
Query:    1 QVGKELFIEATADQLILRTLNDAKSAFAAFYFNDAGGFFESFRQG 45
            +VGKEL +E T D+LILRT+NDAKSA+AA +FN   GFF+ FR G
Sbjct:   37 RVGKELQLEGTTDKLILRTINDAKSAYAAIFFNS--GFFDFFRSG 79
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig38845.10138.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5JSF7_9PHAE1.580e-1786.67Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LT46_ECTSI5.930e-1786.67Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
A0A835ZGY8_9STRA2.130e-864.44Rad9-domain-containing protein n=1 Tax=Tribonema m... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007268Rad9/Ddc1PFAMPF04139Rad9coord: 2..43
e-value: 5.0E-8
score: 32.7
NoneNo IPR availableGENE3D3.70.10.10coord: 1..45
e-value: 3.6E-10
score: 41.5

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig38845contigH-paniculata_contig38845:184..318 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig38845.10138.1mRNA_H-paniculata_contig38845.10138.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig38845 184..318 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig38845.10138.1 ID=prot_H-paniculata_contig38845.10138.1|Name=mRNA_H-paniculata_contig38845.10138.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=45bp
QVGKELFIEATADQLILRTLNDAKSAFAAFYFNDAGGFFESFRQG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007268Rad9/Ddc1