prot_H-paniculata_contig38791.10128.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig38791.10128.1
Unique Nameprot_H-paniculata_contig38791.10128.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length122
Homology
[Close]
BLAST of mRNA_H-paniculata_contig38791.10128.1 vs. uniprot
Match: A0A7S1HPR5_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Phaeocystis cordata TaxID=118079 RepID=A0A7S1HPR5_9EUKA)

HSP 1 Score: 55.1 bits (131), Expect = 4.930e-7
Identity = 22/27 (81.48%), Postives = 24/27 (88.89%), Query Frame = 0 
Query:   21 QWLRENGCAWNETTCSSAAEGGHLQVL 47
            +WLRENGC WNE TCS AAEGGHL+VL
Sbjct:    2 KWLRENGCLWNEGTCSDAAEGGHLEVL 28
[Close]
BLAST of mRNA_H-paniculata_contig38791.10128.1 vs. uniprot
Match: A0A7S1HPE9_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Phaeocystis cordata TaxID=118079 RepID=A0A7S1HPE9_9EUKA)

HSP 1 Score: 50.4 bits (119), Expect = 8.990e-5
Identity = 20/27 (74.07%), Postives = 22/27 (81.48%), Query Frame = 0 
Query:   21 QWLRENGCAWNETTCSSAAEGGHLQVL 47
            QW RENGC WNE TCS AA+ GHL+VL
Sbjct:    3 QWARENGCPWNERTCSDAAKRGHLEVL 29
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig38791.10128.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A7S1HPR5_9EUKA4.930e-781.48Hypothetical protein (Fragment) n=1 Tax=Phaeocysti... [more]
A0A7S1HPE9_9EUKA8.990e-574.07Hypothetical protein (Fragment) n=1 Tax=Phaeocysti... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR46586FAMILY NOT NAMEDcoord: 17..119
NoneNo IPR availableSUPERFAMILY140860Pseudo ankyrin repeat-likecoord: 24..119

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig38791contigH-paniculata_contig38791:277..642 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig38791.10128.1mRNA_H-paniculata_contig38791.10128.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig38791 277..776 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig38791.10128.1 ID=prot_H-paniculata_contig38791.10128.1|Name=mRNA_H-paniculata_contig38791.10128.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=122bp
MSLEHENLRGGSILGTREYFQWLRENGCAWNETTCSSAAEGGHLQVLECA
LRGHLHILQWARANGCPWDEWACRSAALGGHLNIIQWIRENGGPWDKWMC
RRAALGGHLHVLKWCRANGYP*
back to top