prot_H-paniculata_contig3878.10125.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig3878.10125.1
Unique Nameprot_H-paniculata_contig3878.10125.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length160
Homology
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BLAST of mRNA_H-paniculata_contig3878.10125.1 vs. uniprot
Match: D8LM62_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LM62_ECTSI)

HSP 1 Score: 61.6 bits (148), Expect = 4.480e-9
Identity = 34/55 (61.82%), Postives = 41/55 (74.55%), Query Frame = 0 
Query:  105 LMEYFCYAVKPDPRFFGTMTFVFDQEAADD------DTGARDLKPELEVSVTIEK 153
            +ME+FCY+VKPDP F G+MTFVFDQ   +D      D  ARD KPELE+SVT+EK
Sbjct:    1 MMEFFCYSVKPDPSFSGSMTFVFDQVLDEDMEDGSWDGVARD-KPELELSVTVEK 54
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BLAST of mRNA_H-paniculata_contig3878.10125.1 vs. uniprot
Match: A0A6H5JDC8_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JDC8_9PHAE)

HSP 1 Score: 63.5 bits (153), Expect = 8.880e-9
Identity = 35/54 (64.81%), Postives = 41/54 (75.93%), Query Frame = 0 
Query:  106 MEYFCYAVKPDPRFFGTMTFVFDQEAADD------DTGARDLKPELEVSVTIEK 153
            ME+FCY+VKPDP F G+MTFVFDQE  +D      D  ARD KPELE+SVT+EK
Sbjct:    1 MEFFCYSVKPDPSFSGSMTFVFDQELDEDMEDGTWDGVARD-KPELELSVTVEK 53
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig3878.10125.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LM62_ECTSI4.480e-961.82Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JDC8_9PHAE8.880e-964.81Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig3878contigH-paniculata_contig3878:5944..16483 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig3878.10125.1mRNA_H-paniculata_contig3878.10125.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig3878 5926..16483 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig3878.10125.1 ID=prot_H-paniculata_contig3878.10125.1|Name=mRNA_H-paniculata_contig3878.10125.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=160bp
MGTNLSKKHSVDSQKEGSYDASAPAVGKPGGRAALMMSAVDKVRDDGNTT
RSGHAFSSSASAVEAEMGRQACGRTFDGCGEVEEEKDEPSTVYSYERDHA
LVLDLMEYFCYAVKPDPRFFGTMTFVFDQEAADDDTGARDLKPELEVSVT
IEKGLNVVIP
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