prot_H-paniculata_contig3876.10122.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig3876.10122.1
Unique Nameprot_H-paniculata_contig3876.10122.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length496
Homology
BLAST of mRNA_H-paniculata_contig3876.10122.1 vs. uniprot
Match: A0A6H5KLG6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KLG6_9PHAE)

HSP 1 Score: 291 bits (745), Expect = 3.400e-87
Identity = 281/582 (48.28%), Postives = 326/582 (56.01%), Query Frame = 0
Query:    1 MVRIATSGMYFPGTLERAVLVAGDTFAVKMACALVLHTIHRPNKGAVSKASSLMDGDEAAKVDVTQRLLIPLSAGGLVIGRKGSNIAVLLKASGAKVSLGQKSEVKANERVVTVQGTLPAVTKATVMLVDKLQEEPVTSRFANMSVNYRGHGH-YNQAAAAAGIMP---PARTFPADK---------------TIIATGAAATDATXXXXXXXXXX-----------GATLSPTNGSTLQAATS--------------GGTGAGRLTGR---------RXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPVISASPDQMGHM-----------------VGGGGPLVHGMRMTYPHPPLLYHPDMPGPGSGGMAXXXXXXXXXXXXXXXXXXXXXXRGMGGPA----GGGVPRGYP-----------------------PHQHQHQMFPYEPMTNPVAMAIAACQPTTTVTVGVPDNIVGAILGRGGSTINELQSVSGARITVSQRDELMPGTENRILTISGTAIATQTAQYLVSQKVES 485
            MVRIATSGMY+PGT+ERAVLVAG+T  VK AC L+LHT+H P+    S  + L+  ++A  ++VTQRLLIPL+AGGLVIGR+G+NIA LL ASGAKV+LGQK++VK +ER+VTVQG L + TKA  MLVDKL EEPV SRFAN+SVNYRGHG  +++AA AAGI+P   P +  P D                T  A  AAA+   XXXXXXXXXX             T SP   +T +  TS              G  G GR+ GR         R            XXXXXXXXXXXXXXXX            XXXXXXXXXXXXXXXXXXXXXXXX        P   A P                       +G GGP+V       P  P+  HP    P                              M GP     G G PRGYP                       P Q Q  MFP EPMTNPVA AIA+CQPTTTVTVGVP+N++GAILG GG+ I+ELQ++SGARI VSQRD  MPGTENRILTI+G   ATQTAQYLVSQK+E+
Sbjct:  121 MVRIATSGMYYPGTMERAVLVAGETEGVKQACGLILHTLHVPDNNE-SGCAKLVSEEKAEAIEVTQRLLIPLTAGGLVIGRRGANIAALLAASGAKVTLGQKADVKVHERLVTVQGKLTSATKAVEMLVDKLVEEPVLSRFANLSVNYRGHGSSHSKAAMAAGIVPAPLPYQRAPRDPSTPQKAASDAGTEPDTAAAAAAAASPXXXXXXXXXXXXXXXVTPVMIGSSVTSSPATSATGRRITSPPRLSSSSPRRTARGARGGGRMVGRGFGSGNVGNRFQPQQFRQQHQQXXXXXXXXXXXXXXXXHQFYRQQSGSMQXXXXXXXXXXXXXXXXXXXXXXXXHQQRLPMSPASIAPPTPXXXXXXXXXXXXXASMVVSLPMGPGGPMVSSPMQMAPMGPMS-HPSATAP-----VYTMSYAPAPAGNLYHQGGMQAAPSMPGPVATVGGDGQPRGYPAMAVPPQXXXXXXXXXXXXXQQLPRQ-QLGMFPMEPMTNPVAAAIASCQPTTTVTVGVPNNMIGAILGPGGAIISELQALSGARINVSQRDAFMPGTENRILTITGGPQATQTAQYLVSQKIEA 694          
BLAST of mRNA_H-paniculata_contig3876.10122.1 vs. uniprot
Match: D8LGY3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGY3_ECTSI)

HSP 1 Score: 192 bits (488), Expect = 7.400e-54
Identity = 101/151 (66.89%), Postives = 123/151 (81.46%), Query Frame = 0
Query:    1 MVRIATSGMYFPGTLERAVLVAGDTFAVKMACALVLHTIHRPNKGAVSKASSLMDGDEAAKVDVTQRLLIPLSAGGLVIGRKGSNIAVLLKASGAKVSLGQKSEVKANERVVTVQGTLPAVTKATVMLVDKLQEEPVTSRFANMSVNYRGH 151
            MV IATSGMY+PGT+ERAVLVAG+T  VK AC L+LHT+H P+    S  + L+  ++A  ++VTQRLLIPL+AGGLVIGR+G+NIA LL ASGAKV+LGQK++VK +ER+VTVQG L + TKA  MLVDKL EEPV SRFAN+SVNYR H
Sbjct:  117 MVGIATSGMYYPGTMERAVLVAGETEGVKQACGLILHTLHVPDNNE-SGCAKLVSQEKAEAIEVTQRLLIPLTAGGLVIGRRGANIAALLAASGAKVTLGQKADVKVHERLVTVQGKLTSATKAVEMLVDKLVEEPVLSRFANLSVNYRSH 266          
BLAST of mRNA_H-paniculata_contig3876.10122.1 vs. uniprot
Match: A0A836CIW2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CIW2_9STRA)

HSP 1 Score: 139 bits (349), Expect = 5.120e-33
Identity = 78/149 (52.35%), Postives = 101/149 (67.79%), Query Frame = 0
Query:    1 MVRIATSGMYFPGTLERAVLVAGDTFAVKMACALVLHTIHRPNKGAVSKASSLMD-GDEAAKVDVTQRLLIPLSAGGLVIGRKGSNIAVLLKASGAKVSLGQKSEVKANERVVTVQGTLPAVTKATVMLVDKLQEEPVTSRFANMSVNY 148
            +V+++TSGMY PGT +R VLV GD   VK ACALVLHT+H   +       + +D G E   ++VTQRLLIP SAGGLVIGR GSNI  L ++SGA+VSL QK    ++ERVVT+ G+L A      ML+D L+ EP  + + N+SVNY
Sbjct:   80 VVKVSTSGMYLPGTQDRVVLVTGDLPRVKAACALVLHTVHEQGRDRDCGVPAPLDIGTERDALEVTQRLLIPASAGGLVIGRGGSNIKGLSESSGARVSLSQKQTSPSSERVVTIGGSLGACRLCIDMLLDTLKREPAAAVYTNLSVNY 228          
BLAST of mRNA_H-paniculata_contig3876.10122.1 vs. uniprot
Match: A0A835ZEM4_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZEM4_9STRA)

HSP 1 Score: 117 bits (293), Expect = 3.120e-24
Identity = 178/482 (36.93%), Postives = 238/482 (49.38%), Query Frame = 0
Query:    6 TSGMYFPGTLERAVLVAGDTFAVKMACALVLHTIHRPNKGA-VSKASSLMDGDEAAKVDVTQRLLIPLSAGGLVIGRKGSNIAVLLKASGAKVSLGQKSEVKANERVVTVQGTLPAVTKATVMLVDKLQEEPVTSRFANMSVN--YRGHGHYNQAAAAAGIMPPARTFPADKTIIATGAAATDATXXXXXXXXXXGATLSPTNGSTLQAATSGGTGAGRLTGRRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPVISASPDQMGHMVGGGGPLVHGMRMTYPHPPLLYHPDMPGPGSGGMAXXXXXXXXXXXXXXXXXXXXXXRGMGGPAGGGVPRGYPPHQHQHQMFPYEPMTNPVAMAIAACQPTTTVTVGVPDNIVGAILGRGGSTINELQSVSGARITVSQRDELMPGTENRILTISGTAIATQTAQYLVSQKVE 484
            +S    PG L+R VL++GD   VKMA ALVLHT+H   +    ++ + L       + ++TQRLLIP +AGGLVIG +GS +  L  ASGA+VSL  K    + ERV+T+ G L A      ML+D L+ EP  SR+ N+SV+      G    A A +           +   +AT                    T+SP   +         T    +  +                    XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX V  A+P  +G+  GGG  ++ GM +  P  P +                                                             P   + +P   A+A     TT+ V +PD ++G ILGRGG T+NELQ ++GARI+VS+R   +PGT +R++TI+G+A A   AQY++  +V+
Sbjct:  302 SSSACLPGILDRVVLISGDAAPVKMAVALVLHTVHDHARDRDATEPAPLAIAAALNEQEITQRLLIPAAAGGLVIGWRGSGVQALSSASGARVSLSHKRNPASAERVMTIHGALGACRLCIDMLLDVLRREPAMSRYLNLSVDPPQLQQGDAPAAGAPSXXXXXXXXXSQELADVAT----------WVGGGVEGEHTISPVASAAPLTMHQSPTLHHHVPPQHVLELPVQQAAAHPQHLMSAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLVTPAAP--VGYYPGGG--MMVGMPVLAPVVPQM-------------------------------------------------------------PMPMVQHPDVSAVA-----TTIMVSIPDALIGVILGRGGVTVNELQMITGARISVSRRGNALPGTTDRVVTITGSAAAAHAAQYMMMHRVQ 703          
BLAST of mRNA_H-paniculata_contig3876.10122.1 vs. uniprot
Match: A0A836CCL5_9STRA (KH domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CCL5_9STRA)

HSP 1 Score: 100 bits (249), Expect = 7.430e-22
Identity = 51/96 (53.12%), Postives = 72/96 (75.00%), Query Frame = 0
Query:  399 TNPVAMAIAACQPTTTVTVGVPDNIVGAILGRGGSTINELQS----VSGARITVSQRDELMPGTENRILTISGTAIATQTAQYLVSQKVESISTIA 490
            T+PVA A+A     TT+TV +PDN+VGAILGRGG+TINELQ+     SGARI VSQR + +PGT NR +TI+G+  A Q AQ+L++ ++++ ++ A
Sbjct:    5 THPVAAAVAGAAAVTTITVSIPDNMVGAILGRGGATINELQASGRRTSGARINVSQRGDFIPGTSNRTVTITGSPAAAQAAQFLITHRIQAAASEA 100          
BLAST of mRNA_H-paniculata_contig3876.10122.1 vs. uniprot
Match: A0A7S0GCT5_9STRA (Hypothetical protein n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0GCT5_9STRA)

HSP 1 Score: 89.4 bits (220), Expect = 8.320e-18
Identity = 43/74 (58.11%), Postives = 59/74 (79.73%), Query Frame = 0
Query:  410 QPTTTVTVGVPDNIVGAILGRGGSTINELQSVSGARITVSQRDELMPGTENRILTISGTAIATQTAQYLVSQKV 483
            +P  +V V VPD ++G ILGRGG+ IN+LQ  SGARI +SQR E++PGT NRI+TI+GTA +  TAQ+L+SQ++
Sbjct:   27 EPLQSVQVAVPDQLIGGILGRGGAGINDLQMCSGARIKISQRGEVIPGTNNRIITITGTASSCATAQFLISQRM 100          
BLAST of mRNA_H-paniculata_contig3876.10122.1 vs. uniprot
Match: UPI000695E587 (RNA-binding protein Nova-2 n=1 Tax=Chinchilla lanigera TaxID=34839 RepID=UPI000695E587)

HSP 1 Score: 83.6 bits (205), Expect = 7.820e-16
Identity = 42/81 (51.85%), Postives = 59/81 (72.84%), Query Frame = 0
Query:  403 AMAIAACQPTTTVTVGVPDNIVGAILGRGGSTINELQSVSGARITVSQRDELMPGTENRILTISGTAIATQTAQYLVSQKV 483
            A  +AA      V + VP+N+VGAILG+GG T+ E Q ++GARI +S++ E +PGT NR +TI+G+  ATQ AQYL+SQ+V
Sbjct:   16 AEKLAAESAKELVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFLPGTRNRRVTITGSPAATQAAQYLISQRV 96          
BLAST of mRNA_H-paniculata_contig3876.10122.1 vs. uniprot
Match: A0A670XVA5_PSETE (KH domain-containing protein n=1 Tax=Pseudonaja textilis TaxID=8673 RepID=A0A670XVA5_PSETE)

HSP 1 Score: 84.0 bits (206), Expect = 1.830e-15
Identity = 40/79 (50.63%), Postives = 58/79 (73.42%), Query Frame = 0
Query:  415 VTVGVPDNIVGAILGRGGSTINELQSVSGARITVSQRDELMPGTENRILTISGTAIATQTAQYLVSQKVESISTIADKP 493
            V + VP+N+VGAILG+GG T+ E Q ++GARI +S++ E +PGT NR +TI+GT  ATQ AQYL++Q++     +  KP
Sbjct:   62 VEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFVPGTRNRKVTITGTPAATQAAQYLITQRITYEQGVRAKP 140          
BLAST of mRNA_H-paniculata_contig3876.10122.1 vs. uniprot
Match: A0A7S0GD86_9STRA (Hypothetical protein n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0GD86_9STRA)

HSP 1 Score: 89.4 bits (220), Expect = 3.720e-15
Identity = 43/74 (58.11%), Postives = 59/74 (79.73%), Query Frame = 0
Query:  410 QPTTTVTVGVPDNIVGAILGRGGSTINELQSVSGARITVSQRDELMPGTENRILTISGTAIATQTAQYLVSQKV 483
            +P  +V V VPD ++G ILGRGG+ IN+LQ  SGARI +SQR E++PGT NRI+TI+GTA +  TAQ+L+SQ++
Sbjct:  581 EPLQSVQVAVPDQLIGGILGRGGAGINDLQMCSGARIKISQRGEVIPGTNNRIITITGTASSCATAQFLISQRM 654          
BLAST of mRNA_H-paniculata_contig3876.10122.1 vs. uniprot
Match: A0A3B4YXF0_9TELE (RNA-binding protein Nova-1-like n=1 Tax=Stegastes partitus TaxID=144197 RepID=A0A3B4YXF0_9TELE)

HSP 1 Score: 86.7 bits (213), Expect = 1.030e-14
Identity = 43/84 (51.19%), Postives = 60/84 (71.43%), Query Frame = 0
Query:  400 NPVAMAIAACQPTTTVTVGVPDNIVGAILGRGGSTINELQSVSGARITVSQRDELMPGTENRILTISGTAIATQTAQYLVSQKV 483
            NP A A  A      V + VP+N+VGAILG+GG T+ E Q ++GARI +S++ E +PGT NR +TI+G+  ATQ AQYL+SQ++
Sbjct:  295 NPAAAAALADGAKDVVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFIPGTRNRKVTITGSPAATQAAQYLISQRI 378          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig3876.10122.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KLG6_9PHAE3.400e-8748.28Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LGY3_ECTSI7.400e-5466.89Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A836CIW2_9STRA5.120e-3352.35Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835ZEM4_9STRA3.120e-2436.93Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A836CCL5_9STRA7.430e-2253.13KH domain-containing protein n=1 Tax=Tribonema min... [more]
A0A7S0GCT5_9STRA8.320e-1858.11Hypothetical protein n=1 Tax=Proboscia inermis Tax... [more]
UPI000695E5877.820e-1651.85RNA-binding protein Nova-2 n=1 Tax=Chinchilla lani... [more]
A0A670XVA5_PSETE1.830e-1550.63KH domain-containing protein n=1 Tax=Pseudonaja te... [more]
A0A7S0GD86_9STRA3.720e-1558.11Hypothetical protein n=1 Tax=Proboscia inermis Tax... [more]
A0A3B4YXF0_9TELE1.030e-1451.19RNA-binding protein Nova-1-like n=1 Tax=Stegastes ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 254..284
NoneNo IPR availablePANTHERPTHR10288KH DOMAIN CONTAINING RNA BINDING PROTEINcoord: 5..153
NoneNo IPR availablePANTHERPTHR10288KH DOMAIN CONTAINING RNA BINDING PROTEINcoord: 345..484
NoneNo IPR availablePROSITEPS50084KH_TYPE_1coord: 63..128
score: 15.032
NoneNo IPR availablePROSITEPS50084KH_TYPE_1coord: 412..479
score: 18.009
IPR004087K Homology domainSMARTSM00322kh_6coord: 62..133
e-value: 2.4E-8
score: 43.7
coord: 411..484
e-value: 7.1E-14
score: 62.1
IPR036612K Homology domain, type 1 superfamilyGENE3D3.30.1370.10coord: 410..487
e-value: 3.5E-20
score: 73.6
IPR036612K Homology domain, type 1 superfamilyGENE3D3.30.1370.10coord: 63..139
e-value: 2.2E-15
score: 57.9
IPR036612K Homology domain, type 1 superfamilySUPERFAMILY54791Eukaryotic type KH-domain (KH-domain type I)coord: 413..485
IPR036612K Homology domain, type 1 superfamilySUPERFAMILY54791Eukaryotic type KH-domain (KH-domain type I)coord: 61..153
IPR004088K Homology domain, type 1PFAMPF00013KH_1coord: 414..480
e-value: 5.9E-15
score: 54.8
coord: 65..128
e-value: 2.5E-9
score: 36.8
IPR033087RNA-binding protein Nova-2PANTHERPTHR10288:SF162RNA-BINDING PROTEIN NOVA-2coord: 345..484
IPR033087RNA-binding protein Nova-2PANTHERPTHR10288:SF162RNA-BINDING PROTEIN NOVA-2coord: 5..153

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig3876contigH-paniculata_contig3876:5155..12690 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig3876.10122.1mRNA_H-paniculata_contig3876.10122.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig3876 2344..13622 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig3876.10122.1 ID=prot_H-paniculata_contig3876.10122.1|Name=mRNA_H-paniculata_contig3876.10122.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=496bp
MVRIATSGMYFPGTLERAVLVAGDTFAVKMACALVLHTIHRPNKGAVSKA
SSLMDGDEAAKVDVTQRLLIPLSAGGLVIGRKGSNIAVLLKASGAKVSLG
QKSEVKANERVVTVQGTLPAVTKATVMLVDKLQEEPVTSRFANMSVNYRG
HGHYNQAAAAAGIMPPARTFPADKTIIATGAAATDATAADAENAPSPGAT
LSPTNGSTLQAATSGGTGAGRLTGRRQQQQQQQQQQQHQYLSNSARGAGG
GPPRAQQQQQQQQQQQQQQQQQQQQQQQQQQQQQHPPQIIGMPPPPGGPV
ISASPDQMGHMVGGGGPLVHGMRMTYPHPPLLYHPDMPGPGSGGMAAAPG
GSAAAAAAAAAAAASGGGRGMGGPAGGGVPRGYPPHQHQHQMFPYEPMTN
PVAMAIAACQPTTTVTVGVPDNIVGAILGRGGSTINELQSVSGARITVSQ
RDELMPGTENRILTISGTAIATQTAQYLVSQKVESISTIADKPKR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR004087KH_dom
IPR036612KH_dom_type_1_sf
IPR004088KH_dom_type_1
IPR033087Nova-2