prot_H-paniculata_contig38694.10107.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig38694.10107.1
Unique Nameprot_H-paniculata_contig38694.10107.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length339
Homology
BLAST of mRNA_H-paniculata_contig38694.10107.1 vs. uniprot
Match: A0A6H5LL52_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LL52_9PHAE)

HSP 1 Score: 201 bits (511), Expect = 9.460e-58
Identity = 126/357 (35.29%), Postives = 189/357 (52.94%), Query Frame = 0
Query:   10 NYQECRGRVRLADGNYLPIEGIGILFIHVRF--DSKVVLMKLIQVAHVPLLSHYLLPLGRFADSGHDIGAPAKG-------GTQVY------------------IEDSALATIAPSRLAVHSATHVDISAFHCSFGHANGFLLRETAKQRGVVLTG-ELRRCRGCAMVKGLREPISKAPAPRAVKERSLTYVDTCGPKGVWGVGGVRFMRIVKDSFSRKSTVYFMRSKSKVGGHLKQYLADTRSDSIPSSAGVIRTDNTAEFREGEFAEICREQGIRQECITRDRPPYNGVAERGIAMIESAGLSAQIQAKYLFPGVKIPSGDSLWSLRNLWACHALICTETRANVGYMSPYELWYG 338
            NY+EC G V+   GN  P+  +G   + V F  +   V + ++  AHVP   H LL L   A+ GH       G       G +V+                  ++ +  ATI P      +AT  D+++ H S GH +  LL++TAKQ+GV LTG  L  C GC+M KG  +PISK+   RA  +    +++  G      +GG  +  I++D  +R + V+F++ KS      +QYLAD R++++P    V RTD   EF+ G+FAE+CR  GI+QE    + P YNGVAER + ++  + L+++IQAK +FP   +  G  LW+     ACH + CT T  N G+ SP EL++G
Sbjct:   10 NYRECSGWVKGIGGNNAPVPPLGYGDVTVVFLTEGGRVPVLILNAAHVPESPHNLLSLSALAEEGHTYSGQKGGLTLTTRAGGKVWFPRPGKLLTQEGYQIEPKVDIACAATIVPGD--AKAATPTDLNSDHNSHGHTHEELLQKTAKQQGVQLTGGPLLPCLGCSMSKGQVKPISKSTDTRAANKLFRLFLNLGGRMQFKSIGGNWYTLIIRDDCTRWTRVFFLKHKSDAAAAFEQYLADYRAETVPCEVFVARTDGGGEFQ-GQFAEVCRRSGIKQEFTPPNTPKYNGVAERALGLLADSALASRIQAKEMFPDAPVSPG--LWAEAISCACHQMNCTATTGNPGHKSPEELFHG 361          
BLAST of mRNA_H-paniculata_contig38694.10107.1 vs. uniprot
Match: A0A6H5KVR5_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVR5_9PHAE)

HSP 1 Score: 199 bits (505), Expect = 1.550e-57
Identity = 98/234 (41.88%), Postives = 143/234 (61.11%), Query Frame = 0
Query:  106 THVDISAFHCSFGHANGFLLRETAKQRGVVLTGELRRCRGCAMVKGLREPISKAPAPRAVKERSLTYVDTCGPKGVWGVGGVRFMRIVKDSFSRKSTVYFMRSKSKVGGHLKQYLADTRSDSIPSSAGVIRTDNTAEFREGEFAEICREQGIRQECITRDRPPYNGVAERGIAMIESAGLSAQIQAKYLFPGVKIPSGDSLWSLRNLWACHALICTETRANVGYMSPYELWYGK 339
            T +DI+ FH  + H++  LLR TAK+ G  L G++  C GC+M K +R+ I +    R+ K+    + D  G K +  VGG  +  IVKD F+R + +YF+R+KS  G   + +LA  R++ +PS   ++R+DN  +F  G+FA +C E  I+QE      P YNGVAERG+ +IE A ++A+IQAK LF  V++P  D LW+    WAC A+  T   AN   MSPYE+WYG+
Sbjct:   30 TTMDINEFHNIYAHSHEGLLRTTAKRLGTKLVGDMHACSGCSMSKAIRKGIVRETKRRSDKKLGRVFADLGGRKDIASVGGKHYPIIVKDDFTRHTWMYFLRNKSDAGSAFRTFLASVRANGVPSFVEIVRSDNGGKFFGGDFASVCNELLIKQEFTPAYSPQYNGVAERGLGLIEEAAMAARIQAKVLFGHVQLPKTDKLWAEAMHWACEAMNHTACSANPDSMSPYEMWYGE 263          
BLAST of mRNA_H-paniculata_contig38694.10107.1 vs. uniprot
Match: A0A6H5JV76_9PHAE (Integrase catalytic domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JV76_9PHAE)

HSP 1 Score: 204 bits (518), Expect = 2.880e-57
Identity = 100/234 (42.74%), Postives = 146/234 (62.39%), Query Frame = 0
Query:  106 THVDISAFHCSFGHANGFLLRETAKQRGVVLTGELRRCRGCAMVKGLREPISKAPAPRAVKERSLTYVDTCGPKGVWGVGGVRFMRIVKDSFSRKSTVYFMRSKSKVGGHLKQYLADTRSDSIPSSAGVIRTDNTAEFREGEFAEICREQGIRQECITRDRPPYNGVAERGIAMIESAGLSAQIQAKYLFPGVKIPSGDSLWSLRNLWACHALICTETRANVGYMSPYELWYGK 339
            T +DI+ FH  + H++  LLR TAK+ G  L G++  C GC+M K +R+ I +    R+ K+    +VD  G K +  VGG  +  IVKD F+R++ +YF++++S  GG  + +LA  R++ +PS   ++R+DN  EF  GEFA +C E  I+QE      P YNGVAERG+ +IE A ++A+IQAK LF  V++P  D LW+    WAC A+  T   AN   MSPYE+WYG+
Sbjct:  250 TTMDINEFHNIYAHSHEGLLRTTAKRLGTKLVGDMHACSGCSMSKAIRKGIVRETKRRSDKKLGRVFVDLGGRKDIASVGGKHYPMIVKDDFTRRTWMYFLKNESDAGGAFRTFLASVRANIVPSFVEIVRSDNGGEFFGGEFASVCNELLIKQEFTPAYSPQYNGVAERGLGLIEEAAMAARIQAKVLFGHVQLPKTDKLWAEAMHWACEAMNHTACSANPDSMSPYEMWYGE 483          
BLAST of mRNA_H-paniculata_contig38694.10107.1 vs. uniprot
Match: A0A6H5JH25_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JH25_9PHAE)

HSP 1 Score: 208 bits (530), Expect = 1.210e-56
Identity = 106/250 (42.40%), Postives = 153/250 (61.20%), Query Frame = 0
Query:   90 SALATIAPSRLAVHSATHVDISAFHCSFGHANGFLLRETAKQRGVVLTGELRRCRGCAMVKGLREPISKAPAPRAVKERSLTYVDTCGPKGVWGVGGVRFMRIVKDSFSRKSTVYFMRSKSKVGGHLKQYLADTRSDSIPSSAGVIRTDNTAEFREGEFAEICREQGIRQECITRDRPPYNGVAERGIAMIESAGLSAQIQAKYLFPGVKIPSGDSLWSLRNLWACHALICTETRANVGYMSPYELWYGK 339
            S LA + PS         +D++ FH  +GHA+  +LR TAK+ G+ LTG++  C GC+M K +R+ I+      + K+    +V+  G KGV  +GG  +  I+KD F+R++ +YF+RSKS  G   + +LA+ R+D IPS   ++R+DN  EF  GEFA +C E  I+QE      P +NGVAERG+ +IE A ++A+IQAK LF  V++P  D LW+    WAC AL  T   AN    SPYE+WYG+
Sbjct:  375 SVLAALTPSN--PKRVKIMDVNDFHNIYGHAHEGMLRTTAKRLGIELTGKMHACSGCSMGKAIRKAIAHVTTNSSDKKLGRVFVNLGGKKGVASIGGKHYPMILKDDFTRRAWMYFLRSKSDAGSAFRSFLANVRADGIPSLIEIVRSDNGGEFFGGEFASVCNELLIKQEFTPAHSPEFNGVAERGLGLIEEAAMAARIQAKVLFGHVQLPKTDRLWAEAMHWACEALNHTACSANPDSKSPYEMWYGE 622          
BLAST of mRNA_H-paniculata_contig38694.10107.1 vs. uniprot
Match: A0A6H5L175_9PHAE (Uncharacterized protein n=9 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L175_9PHAE)

HSP 1 Score: 206 bits (524), Expect = 8.090e-56
Identity = 130/365 (35.62%), Postives = 196/365 (53.70%), Query Frame = 0
Query:    1 MTNDPDFLRNYQECRGRVRLADGNYLPIEGIGILFIHVRFDSKVVLMKLIQVAHVPLLSHYLLPLGRFADSGHDI-GAPA------KGGTQVY------------------IEDSALATIAPSRLAVHSATHVDISAFHCSFGHANGFLLRETAKQRGVVLTG-ELRRCRGCAMVKGLREPISKAPAPRAVKERSLTYVDTCGPKGVWGVGGVRFMRIVKDSFSRKSTVYFMRSKSKVGGHLKQYLADTRSDSIPSSAGVIRTDNTAEFREGEFAEICREQGIRQECITRDRPPYNGVAERGIAMIESAGLSAQIQAKYLFPGVKIPSGDSLWSLRNLWACHALICTETRANVGYMSPYELWYGK 339
            M    D  +NYQEC  RV+   G +L I G G + + ++ + + V + + + AHVP +   L+ L    + GH   G P       K G +V+                  ++ +  A I P      +AT  D++ FH S GHA+  LLR TAKQ+GV LTG  L  C GC+M KG  + + +    RAVK+    ++D  G      +GG  +  I++   +R + V+F++ KS+    L+Q++AD RS+  P    V+R+DN  EF+ G+F++ CR+ GI+QE      P YNGVAER + +I  A L+++IQAK +FP    P+  +LW+     ACH L CT T AN G  SPYE+++GK
Sbjct:  569 MFRSADGFKNYQECNRRVKGIGGEFLRILGYGDVTVVLQSEGQEVPVPIKRAAHVPGMDLNLISLTSLTEEGHTYAGKPGGLVLTTKAGKEVWFPQLGKLLSLWGYQTEPEVDTACAAIIVPGE--AKAATPTDLNEFHNSHGHAHERLLRLTAKQQGVELTGGPLLSCTGCSMAKGQVKAVQRFTDTRAVKKLFRVFIDLGGRMQFHSIGGRWYTLIIRCDATRWTRVFFLKRKSEAADALEQFIADYRSEGTPCEVYVVRSDN--EFQ-GQFSKTCRKWGIKQEKTPPHTPKYNGVAERWLGIISDAALASRIQAKEMFPDA--PTDPALWAEAIACACHQLNCTATTANPGDKSPYEMFHGK 926          
BLAST of mRNA_H-paniculata_contig38694.10107.1 vs. uniprot
Match: A0A6H5JBA7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBA7_9PHAE)

HSP 1 Score: 204 bits (520), Expect = 2.570e-55
Identity = 105/248 (42.34%), Postives = 150/248 (60.48%), Query Frame = 0
Query:   92 LATIAPSRLAVHSATHVDISAFHCSFGHANGFLLRETAKQRGVVLTGELRRCRGCAMVKGLREPISKAPAPRAVKERSLTYVDTCGPKGVWGVGGVRFMRIVKDSFSRKSTVYFMRSKSKVGGHLKQYLADTRSDSIPSSAGVIRTDNTAEFREGEFAEICREQGIRQECITRDRPPYNGVAERGIAMIESAGLSAQIQAKYLFPGVKIPSGDSLWSLRNLWACHALICTETRANVGYMSPYELWYGK 339
            LA + PS    H  T +D++ FH  + H++  LLR TAK+ G  L GE+  C GC+M K +++ I++    R+ K+    +VD  G K V  VGG  +  IVKD F+R++ +YF++ KS  G   + +LA  R+D +PS   ++R+DN  EF  GEFA +C E  I+QE      P YNGVAERG+ +IE A ++A+IQAK LF  V++P  D LW+    WAC A+  T   AN    SPYE+WYG+
Sbjct:  650 LAALTPSN-PKHKTT-MDVNEFHNIYAHSHKGLLRTTAKRLGTELVGEMHECTGCSMAKAVKKGIARETKSRSDKKLGRVFVDLGGRKDVASVGGKHYPMIVKDDFTRRAWMYFLKHKSDAGMAFRSFLASVRADGVPSLVEIVRSDNGGEFFGGEFASVCNELLIKQEFTPAYSPQYNGVAERGLGLIEEAAMAARIQAKVLFGHVQLPKTDKLWAEAMHWACEAMNHTACSANPDSKSPYEMWYGE 895          
BLAST of mRNA_H-paniculata_contig38694.10107.1 vs. uniprot
Match: A0A6H5KZH7_9PHAE (Uncharacterized protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZH7_9PHAE)

HSP 1 Score: 204 bits (520), Expect = 2.630e-55
Identity = 105/248 (42.34%), Postives = 150/248 (60.48%), Query Frame = 0
Query:   92 LATIAPSRLAVHSATHVDISAFHCSFGHANGFLLRETAKQRGVVLTGELRRCRGCAMVKGLREPISKAPAPRAVKERSLTYVDTCGPKGVWGVGGVRFMRIVKDSFSRKSTVYFMRSKSKVGGHLKQYLADTRSDSIPSSAGVIRTDNTAEFREGEFAEICREQGIRQECITRDRPPYNGVAERGIAMIESAGLSAQIQAKYLFPGVKIPSGDSLWSLRNLWACHALICTETRANVGYMSPYELWYGK 339
            LA + PS    H  T +D++ FH  + H++  LLR TAK+ G  L GE+  C GC+M K +++ I++    R+ K+    +VD  G K V  VGG  +  IVKD F+R++ +YF++ KS  G   + +LA  R+D +PS   ++R+DN  EF  GEFA +C E  I+QE      P YNGVAERG+ +IE A ++A+IQAK LF  V++P  D LW+    WAC A+  T   AN    SPYE+WYG+
Sbjct:  357 LAALTPSN-PKHKTT-MDVNEFHNIYAHSHKGLLRTTAKRLGTELVGEMHECTGCSMAKAVKKGIARETKSRSDKKLGRVFVDLGGRKDVASVGGKHYPMIVKDDFTRRAWMYFLKHKSDAGMAFRSFLASVRADGVPSLVEIVRSDNGGEFFGGEFASVCNELLIKQEFTPAYSPQYNGVAERGLGLIEEAAMAARIQAKVLFGHVQLPKTDKLWAEAMHWACEAMNHTACSANPDSKSPYEMWYGE 602          
BLAST of mRNA_H-paniculata_contig38694.10107.1 vs. uniprot
Match: A0A6H5K2M6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K2M6_9PHAE)

HSP 1 Score: 202 bits (513), Expect = 8.830e-55
Identity = 105/250 (42.00%), Postives = 151/250 (60.40%), Query Frame = 0
Query:   90 SALATIAPSRLAVHSATHVDISAFHCSFGHANGFLLRETAKQRGVVLTGELRRCRGCAMVKGLREPISKAPAPRAVKERSLTYVDTCGPKGVWGVGGVRFMRIVKDSFSRKSTVYFMRSKSKVGGHLKQYLADTRSDSIPSSAGVIRTDNTAEFREGEFAEICREQGIRQECITRDRPPYNGVAERGIAMIESAGLSAQIQAKYLFPGVKIPSGDSLWSLRNLWACHALICTETRANVGYMSPYELWYGK 339
            S LA + PS     S   +D++ FH  + H++  LLR TAK+ G+ LTG++  C GC+M K  ++ I+     R+ K+    +VD  G K V  VGG  +  IVKD F+R++ +YF++SKS      + +LA  R+D IPS   ++R+DN  EF  GEFA +C E  I+QE      P YNGVAERG+ +IE+A ++A+IQAK LF  V++P  D LW+    WAC A+  T   AN    SPYE+W+G+
Sbjct:  554 SVLAALTPSNPKHESK--MDVNEFHNIYAHSHEGLLRTTAKRLGIELTGKMHACTGCSMSKAFKKGIAHETKCRSDKKLGRVFVDLGGRKDVASVGGKHYPMIVKDDFTRRTWMYFLKSKSDAASAFRSFLASVRADGIPSLVEIVRSDNGGEFFGGEFASVCNELLIKQEFTPAYSPQYNGVAERGLGLIEAAAMAARIQAKVLFGHVQLPKTDRLWAEAMHWACEAINHTACSANPDSKSPYEMWHGE 801          
BLAST of mRNA_H-paniculata_contig38694.10107.1 vs. uniprot
Match: A0A6H5L3Y0_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L3Y0_9PHAE)

HSP 1 Score: 201 bits (511), Expect = 1.650e-54
Identity = 100/234 (42.74%), Postives = 143/234 (61.11%), Query Frame = 0
Query:  106 THVDISAFHCSFGHANGFLLRETAKQRGVVLTGELRRCRGCAMVKGLREPISKAPAPRAVKERSLTYVDTCGPKGVWGVGGVRFMRIVKDSFSRKSTVYFMRSKSKVGGHLKQYLADTRSDSIPSSAGVIRTDNTAEFREGEFAEICREQGIRQECITRDRPPYNGVAERGIAMIESAGLSAQIQAKYLFPGVKIPSGDSLWSLRNLWACHALICTETRANVGYMSPYELWYGK 339
            T +DI+ FH  + H++  LLR TAK+ G  L G++  C GC+M K +R+ I +    R+ K+    +VD  G K    VGG  +  IVKD F+R++ +YF+R+KS  G   + +LA  R++ +PS   ++R+DN  EF  GEFA +C E  I+QE      P YNGVAERG+ +IE A ++A+IQAK LF  V++P  D LW+    WAC A+  T   AN   M PYE+WYG+
Sbjct:  128 TTMDINEFHNIYAHSHEGLLRTTAKRLGTKLVGDMHACSGCSMSKAIRKGIVRETKRRSDKKLGRVFVDLGGRKDSASVGGKHYPMIVKDDFTRRTWMYFLRNKSDAGSAFRTFLASVRANGVPSFVEIVRSDNGGEFFGGEFASVCNELLIKQEFTPAYSPQYNGVAERGLGLIEEAAMAARIQAKVLFGHVQLPKTDKLWAEAMHWACEAMNHTACSANPDSMPPYEMWYGE 361          
BLAST of mRNA_H-paniculata_contig38694.10107.1 vs. uniprot
Match: A0A6H5JRL9_9PHAE (Integrase catalytic domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRL9_9PHAE)

HSP 1 Score: 199 bits (506), Expect = 1.870e-53
Identity = 99/234 (42.31%), Postives = 142/234 (60.68%), Query Frame = 0
Query:  106 THVDISAFHCSFGHANGFLLRETAKQRGVVLTGELRRCRGCAMVKGLREPISKAPAPRAVKERSLTYVDTCGPKGVWGVGGVRFMRIVKDSFSRKSTVYFMRSKSKVGGHLKQYLADTRSDSIPSSAGVIRTDNTAEFREGEFAEICREQGIRQECITRDRPPYNGVAERGIAMIESAGLSAQIQAKYLFPGVKIPSGDSLWSLRNLWACHALICTETRANVGYMSPYELWYGK 339
            T +DI+ FH  + H++  LLR TAK+ G  L G++  C GC+M K +R+ I      R+ K+    +VD  G K +  VGG  +  IVKD F+R++ + F+R+KS  G   + +LA  R++ +PS   ++R+DN  EF  GEF  +C E  I+QE      P YNGVAERG+ +IE A ++A+IQAK LF  V++P  D LW+    WAC A+  T   AN   MSPYE+WYG+
Sbjct:  183 TTMDINEFHNIYAHSHEGLLRTTAKRLGTKLVGDMHACSGCSMSKAIRKGIVGETKRRSDKKLGRVFVDLGGRKDIASVGGKHYPMIVKDDFTRRTWICFLRNKSDAGSAFRTFLASVRANGVPSFVEIVRSDNGGEFFGGEFTSVCNELLIKQEFTPAYSPQYNGVAERGLGLIEEAAMAARIQAKVLFGHVQLPKTDKLWAEAMHWACEAMNHTACSANPDSMSPYEMWYGE 416          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig38694.10107.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5LL52_9PHAE9.460e-5835.29Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5KVR5_9PHAE1.550e-5741.88Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5JV76_9PHAE2.880e-5742.74Integrase catalytic domain-containing protein (Fra... [more]
A0A6H5JH25_9PHAE1.210e-5642.40Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5L175_9PHAE8.090e-5635.62Uncharacterized protein n=9 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JBA7_9PHAE2.570e-5542.34Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KZH7_9PHAE2.630e-5542.34Uncharacterized protein n=3 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K2M6_9PHAE8.830e-5542.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5L3Y0_9PHAE1.650e-5442.74Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5JRL9_9PHAE1.870e-5342.31Integrase catalytic domain-containing protein n=2 ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036397Ribonuclease H superfamilyGENE3D3.30.420.10coord: 163..339
e-value: 4.5E-11
score: 44.3
IPR001584Integrase, catalytic corePFAMPF00665rvecoord: 169..278
e-value: 7.7E-10
score: 39.0
IPR001584Integrase, catalytic corePROSITEPS50994INTEGRASEcoord: 158..339
score: 12.276
IPR012337Ribonuclease H-like superfamilySUPERFAMILY53098Ribonuclease H-likecoord: 172..338

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig38694contigH-paniculata_contig38694:177..1259 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig38694.10107.1mRNA_H-paniculata_contig38694.10107.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig38694 156..1259 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig38694.10107.1 ID=prot_H-paniculata_contig38694.10107.1|Name=mRNA_H-paniculata_contig38694.10107.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=339bp
MTNDPDFLRNYQECRGRVRLADGNYLPIEGIGILFIHVRFDSKVVLMKLI
QVAHVPLLSHYLLPLGRFADSGHDIGAPAKGGTQVYIEDSALATIAPSRL
AVHSATHVDISAFHCSFGHANGFLLRETAKQRGVVLTGELRRCRGCAMVK
GLREPISKAPAPRAVKERSLTYVDTCGPKGVWGVGGVRFMRIVKDSFSRK
STVYFMRSKSKVGGHLKQYLADTRSDSIPSSAGVIRTDNTAEFREGEFAE
ICREQGIRQECITRDRPPYNGVAERGIAMIESAGLSAQIQAKYLFPGVKI
PSGDSLWSLRNLWACHALICTETRANVGYMSPYELWYGK
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036397RNaseH_sf
IPR001584Integrase_cat-core
IPR012337RNaseH-like_sf