mRNA_H-paniculata_contig38667.10102.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig38667.10102.1 vs. uniprot
Match: D8LS12_ECTSI (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LS12_ECTSI) HSP 1 Score: 263 bits (673), Expect = 5.660e-79 Identity = 130/157 (82.80%), Postives = 150/157 (95.54%), Query Frame = 1
Query: 1 QEPVLFAGSIRENISGGKPGATDEEIIAAAKAANAHDYVKAFPDGYATNVGTGGLQLSGGQKQRIAIARAIIKDPAILLLDEATSALDSESEKVVQQALDRLHKVHRRTTVVIAHRLSTIQDADRIAVIADKGIAEVGTHFELLAKDGVYTSLCNMQ 471
QEPVLFAG+IR+N++ GKP ATDEEI+ AAKAANAHD++K+FPD YAT+VGTGGLQLSGGQKQRIAIARAIIKDPAILLLDEATSALDSESEKVVQQALDRLHK+H+ TTVVIAHRLSTIQDADRIAV+A++GIAE+GTH ELLAK+G+YT+LC ++
Sbjct: 482 QEPVLFAGTIRDNVAHGKPDATDEEIVTAAKAANAHDFIKSFPDAYATDVGTGGLQLSGGQKQRIAIARAIIKDPAILLLDEATSALDSESEKVVQQALDRLHKIHKHTTVVIAHRLSTIQDADRIAVVAEQGIAELGTHSELLAKNGIYTALCTIE 638
BLAST of mRNA_H-paniculata_contig38667.10102.1 vs. uniprot
Match: A0A836CGZ9_9STRA (ATP-binding cassette, sub-family B, member 1A n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CGZ9_9STRA) HSP 1 Score: 247 bits (631), Expect = 3.260e-73 Identity = 124/157 (78.98%), Postives = 142/157 (90.45%), Query Frame = 1
Query: 1 QEPVLFAGSIRENISGGKPGATDEEIIAAAKAANAHDYVKAFPDGYATNVGTGGLQLSGGQKQRIAIARAIIKDPAILLLDEATSALDSESEKVVQQALDRLHKVHRRTTVVIAHRLSTIQDADRIAVIADKGIAEVGTHFELLAKDGVYTSLCNMQ 471
QEPVLFAGSIR+NI+ GKPGATDEEII AAKAANAH+++K FP GY T+VG GGLQLSGGQKQR+AIARAIIKDPAILLLDEATSALDSESEKVVQQALD+LH++ RRTT+ IAHRLSTIQ++DRIAVIA+KG+AE+GTH EL A G+Y+ LC Q
Sbjct: 412 QEPVLFAGSIRDNIANGKPGATDEEIINAAKAANAHEFIKGFPKGYRTDVGEGGLQLSGGQKQRVAIARAIIKDPAILLLDEATSALDSESEKVVQQALDKLHELKRRTTITIAHRLSTIQNSDRIAVIANKGVAEIGTHAELTALGGIYSQLCKAQ 568
BLAST of mRNA_H-paniculata_contig38667.10102.1 vs. uniprot
Match: A0A836CDG9_9STRA (ATP-binding cassette, sub-family B, member 1A n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CDG9_9STRA) HSP 1 Score: 242 bits (617), Expect = 2.770e-71 Identity = 122/157 (77.71%), Postives = 139/157 (88.54%), Query Frame = 1
Query: 1 QEPVLFAGSIRENISGGKPGATDEEIIAAAKAANAHDYVKAFPDGYATNVGTGGLQLSGGQKQRIAIARAIIKDPAILLLDEATSALDSESEKVVQQALDRLHKVHRRTTVVIAHRLSTIQDADRIAVIADKGIAEVGTHFELLAKDGVYTSLCNMQ 471
QEPVLF+GSIR+NI+ GKPGATDEEI AAKAANAH+++K FP GY TNVG GGLQLSGGQKQR+AIARAIIKDPAILLLDEATSALDSESEKVVQQALD+L + RRTT+ IAHRLSTIQ++DRIAV+A+KGIAE+GTH EL A G+Y +LC Q
Sbjct: 411 QEPVLFSGSIRDNIANGKPGATDEEITNAAKAANAHEFIKGFPKGYGTNVGEGGLQLSGGQKQRVAIARAIIKDPAILLLDEATSALDSESEKVVQQALDKLQTLKRRTTITIAHRLSTIQNSDRIAVVANKGIAEIGTHAELTALGGLYAALCRAQ 567
BLAST of mRNA_H-paniculata_contig38667.10102.1 vs. uniprot
Match: A0A835Z4J1_9STRA (ATP-binding cassette, sub-family B, member 1A n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z4J1_9STRA) HSP 1 Score: 230 bits (587), Expect = 3.970e-67 Identity = 124/192 (64.58%), Postives = 142/192 (73.96%), Query Frame = 1
Query: 1 QEPVLFAGSIRENISGGKPGATDEEIIAAAKAANAHDYVKAFPDGYATNVGTGGLQLSGGQKQRIAIARAIIKDPAILLL-----------------------------------DEATSALDSESEKVVQQALDRLHKVHRRTTVVIAHRLSTIQDADRIAVIADKGIAEVGTHFELLAKDGVYTSLCNMQ 471
QEPVLFAGSIR+NI+ GKPGATD+EII AAKAANAH+++K FP GY T VG GGLQLSGGQKQR+AIARAIIKDPAILLL DEATSALDSESEKVVQQALDRLH++ RRTT+ IAHRLSTIQ++DRIAVIA++G+AE+GTH EL+A DG+Y LC Q
Sbjct: 515 QEPVLFAGSIRDNIANGKPGATDDEIINAAKAANAHEFIKGFPKGYNTEVGEGGLQLSGGQKQRVAIARAIIKDPAILLLEXXXXXXXXXXXXXXXILRVXXXXXXXXXXXXXLSDEATSALDSESEKVVQQALDRLHELKRRTTITIAHRLSTIQNSDRIAVIANRGVAEIGTHSELMALDGIYAQLCAAQ 706
BLAST of mRNA_H-paniculata_contig38667.10102.1 vs. uniprot
Match: D7FHL5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHL5_ECTSI) HSP 1 Score: 221 bits (563), Expect = 1.050e-65 Identity = 118/157 (75.16%), Postives = 132/157 (84.08%), Query Frame = 1
Query: 1 QEPVLFAGSIRENISGGKPGATDEEIIAAAKAANAHDYVKAFPDGYATNVGTGGLQLSGGQKQRIAIARAIIKDPAILLLDEATSALDSESEKVVQQALDRLHKVHRRTTVVIAHRLSTIQDADRIAVIADKGIAEVGTHFELLAKDGVYTSLCNMQ 471
QEPVLFAG+I NI+ GK G+T +EII AAKAANAH+++K+FP+GY T VG GG QLSGGQKQRIAIARAIIKDPAILLLDEATSALDSESEKVVQ ALD LHK RTTV IAHRLSTI+ AD+IAVI DKG+ E+GTH ELLA +GVY LC Q
Sbjct: 454 QEPVLFAGTIALNIANGKLGSTQDEIITAAKAANAHEFIKSFPEGYNTGVGEGGFQLSGGQKQRIAIARAIIKDPAILLLDEATSALDSESEKVVQAALDELHKDKPRTTVTIAHRLSTIRGADKIAVI-DKGVVELGTHSELLALNGVYHMLCTSQ 609
BLAST of mRNA_H-paniculata_contig38667.10102.1 vs. uniprot
Match: D7FHL1_ECTSI (ATP-binding cassette, sub-family B (MDR/TAP), member 1A n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHL1_ECTSI) HSP 1 Score: 223 bits (569), Expect = 1.030e-64 Identity = 121/158 (76.58%), Postives = 136/158 (86.08%), Query Frame = 1
Query: 1 QEPVLFAGSIRENISGGKPGA-TDEEIIAAAKAANAHDYVKAFPDGYATNVGTGGLQLSGGQKQRIAIARAIIKDPAILLLDEATSALDSESEKVVQQALDRLHKVHRRTTVVIAHRLSTIQDADRIAVIADKGIAEVGTHFELLAKDGVYTSLCNMQ 471
QEPVLFAG+I NI+ GK GA T +EI+AAAKAANAHD++++FPDGY T VG GG QLSGGQKQRIAIARAIIKDPAILLLDEATSALDSESEKVVQ ALD+LHK RTTV IAHRLSTIQ AD+IAVI DKG+ E+GTH ELLA +GVY +LC+ Q
Sbjct: 473 QEPVLFAGTIGLNIANGKHGAATQDEIVAAAKAANAHDFIESFPDGYNTGVGEGGFQLSGGQKQRIAIARAIIKDPAILLLDEATSALDSESEKVVQAALDQLHKDKPRTTVTIAHRLSTIQGADKIAVI-DKGVVELGTHSELLALNGVYHTLCSSQ 629
BLAST of mRNA_H-paniculata_contig38667.10102.1 vs. uniprot
Match: D7FHL4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHL4_ECTSI) HSP 1 Score: 222 bits (566), Expect = 2.380e-64 Identity = 118/157 (75.16%), Postives = 134/157 (85.35%), Query Frame = 1
Query: 1 QEPVLFAGSIRENISGGKPGATDEEIIAAAKAANAHDYVKAFPDGYATNVGTGGLQLSGGQKQRIAIARAIIKDPAILLLDEATSALDSESEKVVQQALDRLHKVHRRTTVVIAHRLSTIQDADRIAVIADKGIAEVGTHFELLAKDGVYTSLCNMQ 471
QEPVLFAG+I NI+ GK G+T +EIIAAA+AANAH+++K+FP+GY T VG GG QLSGGQKQRIAIARAIIKDPAILLLDEATSALDSESEKVVQ ALD+LHK RTTV IAHRLSTI+ AD+IAVI DKG+ E+GTH ELLA +GVY LC Q
Sbjct: 443 QEPVLFAGTIALNIANGKLGSTQDEIIAAARAANAHEFIKSFPEGYNTGVGEGGFQLSGGQKQRIAIARAIIKDPAILLLDEATSALDSESEKVVQAALDKLHKDKPRTTVTIAHRLSTIRGADKIAVI-DKGVVELGTHSELLALNGVYHMLCTSQ 598
BLAST of mRNA_H-paniculata_contig38667.10102.1 vs. uniprot
Match: A0A7S3XS79_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XS79_HETAK) HSP 1 Score: 201 bits (510), Expect = 6.610e-62 Identity = 100/155 (64.52%), Postives = 126/155 (81.29%), Query Frame = 1
Query: 1 QEPVLFAGSIRENISGGKPGATDEEIIAAAKAANAHDYVKAFPDGYATNVGTGGLQLSGGQKQRIAIARAIIKDPAILLLDEATSALDSESEKVVQQALDRLHKVHRRTTVVIAHRLSTIQDADRIAVIADKGIAEVGTHFELLAKDGVYTSLCN 465
QEPVLFAG++R N+ G+PGATD E+ AA+AANAH +++AFP GY T+VG G+QLSGGQKQRIAIARA+IK P ILLLDEATSALD+ESE+VVQ+ALDR+ TT+V+AHRL+T+Q+ DRIAVI+ + E+G H ELLAK G+Y SL +
Sbjct: 70 QEPVLFAGTVRTNVRSGRPGATDAEVQQAAEAANAHGFIQAFPQGYETDVGEAGVQLSGGQKQRIAIARALIKAPKILLLDEATSALDNESERVVQEALDRIQAASAFTTLVVAHRLTTVQNCDRIAVISGGQVKEIGPHKELLAKGGIYASLAS 224
BLAST of mRNA_H-paniculata_contig38667.10102.1 vs. uniprot
Match: A0A418AFP6_9STRA (ABC transporter domain-containing protein (Fragment) n=4 Tax=Aphanomyces TaxID=100860 RepID=A0A418AFP6_9STRA) HSP 1 Score: 196 bits (497), Expect = 3.460e-61 Identity = 102/158 (64.56%), Postives = 128/158 (81.01%), Query Frame = 1
Query: 1 QEPVLFAGSIRENISGGKPGATDEEIIAAAKAANAHDYVKAFPDGYATNVGTGGLQLSGGQKQRIAIARAIIKDPAILLLDEATSALDSESEKVVQQALDRLHKVHRRTTVVIAHRLSTIQDADRIAVIADKGIAEVGTHFELLA-KDGVYTSLCNMQ 471
QEPVLF G+I ENI+ GKPGAT EEI AAK ANAHD++ FPD Y T VG G+Q+SGGQKQRIAIARAII+DPAILLLDEATSALD+ESE++VQ +LD+L K+ RRTT+++AHRLST+++AD IAV+ +AE GTH EL+ +G+Y +L + Q
Sbjct: 21 QEPVLFVGTIGENIATGKPGATQEEIEEAAKKANAHDFIMQFPDKYNTAVGDRGVQVSGGQKQRIAIARAIIRDPAILLLDEATSALDNESERIVQDSLDQLLKLKRRTTIIVAHRLSTVRNADVIAVVDGGRVAEQGTHDELIGIPNGIYANLVSRQ 178
BLAST of mRNA_H-paniculata_contig38667.10102.1 vs. uniprot
Match: T0PRI0_SAPDV (ATP-binding cassette, subfamily B (MDR/TAP), member 1 (Fragment) n=2 Tax=Saprolegniaceae TaxID=4764 RepID=T0PRI0_SAPDV) HSP 1 Score: 197 bits (500), Expect = 4.580e-61 Identity = 103/158 (65.19%), Postives = 129/158 (81.65%), Query Frame = 1
Query: 1 QEPVLFAGSIRENISGGKPGATDEEIIAAAKAANAHDYVKAFPDGYATNVGTGGLQLSGGQKQRIAIARAIIKDPAILLLDEATSALDSESEKVVQQALDRLHKVHRRTTVVIAHRLSTIQDADRIAVIADKGIAEVGTHFELL-AKDGVYTSLCNMQ 471
QEPVLFAG+I +NI+ GKPGAT EI AAK ANAHD++ FP+GY T VG G+Q+SGGQKQRIAIARAII+DPA+LLLDEATSALD+ESE++VQ++LDRL K RRTTV++AHRLSTI++AD IAV+ D + E+GTH EL+ +G+Y +L Q
Sbjct: 67 QEPVLFAGTIADNIATGKPGATMAEIEDAAKKANAHDFIMRFPNGYETTVGDRGVQVSGGQKQRIAIARAIIRDPAVLLLDEATSALDTESERIVQESLDRLLKQKRRTTVIVAHRLSTIRNADMIAVVNDGKVCELGTHDELVNLPNGLYANLVARQ 224 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig38667.10102.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig38667.10102.1 >prot_H-paniculata_contig38667.10102.1 ID=prot_H-paniculata_contig38667.10102.1|Name=mRNA_H-paniculata_contig38667.10102.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=157bp QEPVLFAGSIRENISGGKPGATDEEIIAAAKAANAHDYVKAFPDGYATNVback to top mRNA from alignment at H-paniculata_contig38667:279..1721- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig38667.10102.1 ID=mRNA_H-paniculata_contig38667.10102.1|Name=mRNA_H-paniculata_contig38667.10102.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=1443bp|location=Sequence derived from alignment at H-paniculata_contig38667:279..1721- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig38667:279..1721- >mRNA_H-paniculata_contig38667.10102.1 ID=mRNA_H-paniculata_contig38667.10102.1|Name=mRNA_H-paniculata_contig38667.10102.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=942bp|location=Sequence derived from alignment at H-paniculata_contig38667:279..1721- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |