mRNA_H-paniculata_contig3806.9981.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig3806.9981.1 vs. uniprot
Match: D8LCI4_ECTSI (Rhodanese domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCI4_ECTSI) HSP 1 Score: 335 bits (858), Expect = 2.490e-112 Identity = 163/213 (76.53%), Postives = 192/213 (90.14%), Query Frame = 1
Query: 1 MSLRMGSNQRYTPRGNALDRKVPRNPRYADIQSKVKTGMTVDKLTFVTTRQHLRRQDEPYYRLAPSQLHELLSEYEQDRQEGVHDFRDHIDPDHHGPKVVVHEADAQPSYERPYLILDVRTPAEFRRCHVTQARSFEGKLLNQDHMTPELYMYKNKEGGLVVLYCNDEREACHAATTLIHRGFDNVFVLSHGIISFARS-FQSFVEGDIDALP 636
MSLRMGSN R + R NALD++VPRNPRYA ++SKV+TGMTVDK+TFVTTRQHLRR++EPY+RL PSQL+ELLSEYEQD+QEGV DFRDHIDPDHHGPKVV +E DA+PSY+RPYL+LDVR+P EF+RC + QARSFE KLLNQD MTPELYMYKN+EGGLV+LY ND+ +A HAA TLIHRGFDN+FVLS G+++FAR FQSFVEGD++ALP
Sbjct: 1 MSLRMGSN-RGSVRANALDKRVPRNPRYAGVKSKVQTGMTVDKVTFVTTRQHLRRREEPYFRLTPSQLNELLSEYEQDQQEGVQDFRDHIDPDHHGPKVVEYEPDAKPSYDRPYLVLDVRSPEEFKRCRIVQARSFEAKLLNQDRMTPELYMYKNREGGLVILYSNDDADAGHAARTLIHRGFDNIFVLSGGLVAFAREGFQSFVEGDVEALP 212
BLAST of mRNA_H-paniculata_contig3806.9981.1 vs. uniprot
Match: A0A6H5JFI4_9PHAE (Rhodanese domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JFI4_9PHAE) HSP 1 Score: 294 bits (752), Expect = 1.550e-94 Identity = 138/175 (78.86%), Postives = 161/175 (92.00%), Query Frame = 1
Query: 115 MTVDKLTFVTTRQHLRRQDEPYYRLAPSQLHELLSEYEQDRQEGVHDFRDHIDPDHHGPKVVVHEADAQPSYERPYLILDVRTPAEFRRCHVTQARSFEGKLLNQDHMTPELYMYKNKEGGLVVLYCNDEREACHAATTLIHRGFDNVFVLSHGIISFARS-FQSFVEGDIDALP 636
MTVDK+TFVTTRQHLRR++EPY+RL PSQL+ELLSEYEQD+QEGVHDFRDHIDPDHHGPKVV +E DA+PSY+RPYL+LDVRTP EF+RC + QARSFE KLLNQD MTPELYMYKN+EGGLV+LY ND+ +ACHAA TLIHRGFDN+FVLS G+++FAR FQSFVEG+++ALP
Sbjct: 1 MTVDKVTFVTTRQHLRRREEPYFRLTPSQLNELLSEYEQDQQEGVHDFRDHIDPDHHGPKVVEYEPDAKPSYDRPYLVLDVRTPEEFKRCRIVQARSFEAKLLNQDRMTPELYMYKNREGGLVILYSNDDADACHAARTLIHRGFDNIFVLSGGLVAFAREGFQSFVEGNVEALP 175
BLAST of mRNA_H-paniculata_contig3806.9981.1 vs. uniprot
Match: A0A835ZB11_9STRA (Rhodanese-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZB11_9STRA) HSP 1 Score: 221 bits (564), Expect = 3.080e-67 Identity = 107/189 (56.61%), Postives = 142/189 (75.13%), Query Frame = 1
Query: 52 LDRKVPRNPRYADIQSKVKTGMTVDKLTFVTTRQHLRRQDEPYYRLAPSQLHELLSEYEQDRQEGVHDFRDHIDPDHHGPKVVVHEADAQPSYERPYLILDVRTPAEFRRCHVTQARSFEGKLLNQDHMTPELYMYKNKEGGLVVLYCNDEREACHAATTLIHRGFDNVFVLSHGIISFARSFQSFVEG 618
++R++P NPRYA ++S++ TG+TVDK+ +VT ++ LRR+DEPYYR+ P QL +LLSEYEQD QEGV D DPD HGP VV + +A+ +Y+RPYLILD+RTP E+ V QARSF +LNQD MT EL+ +KN+EG L+VLY ++ER AC AA TL+HRGFDNV+VLS G+ +F F+EG
Sbjct: 1 MERRIPENPRYAHVRSRLDTGLTVDKVKYVTAKEFLRRRDEPYYRVTPGQLFDLLSEYEQDLQEGVQDMASKQDPDSHGPVVVTYTEEAEAAYDRPYLILDLRTPEEYTVHRVAQARSFPIVMLNQDRMTAELFKFKNREGTLIVLYEDEERLACQAAQTLLHRGFDNVYVLSGGLQAFTHLHPDFIEG 189
BLAST of mRNA_H-paniculata_contig3806.9981.1 vs. uniprot
Match: A0A7S2V7G5_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V7G5_9STRA) HSP 1 Score: 196 bits (497), Expect = 3.870e-58 Identity = 93/189 (49.21%), Postives = 139/189 (73.54%), Query Frame = 1
Query: 52 LDRKVPRNPRYADIQSKVKTGMTVDKLTFVTTRQHLRRQDEPYYRLAPSQLHELLSEYEQDRQEGVHDFRDHIDPDHHGPKVVVHEADAQPSYERPYLILDVRTPAEFRRCHVTQARSFEGKLLNQDHMTPELYMYKNKEGGLVVLYCNDEREACHAATTLIHRGFDNVFVLSHGIISFARSFQSFVEG 618
LD+KVPRNP+Y D++S++ TGMTVDK+ +++T ++L+R++E ++RL+ +QLH L +EYE D + D ++ GP+VV EAD +PSY+RPYL+LD+RT E+ +CH+ QARSF ++LNQD M +LY YKNKEG L+VLYC++E + A TL+ RGFDN+F+L+ G+ +F+ +VEG
Sbjct: 12 LDKKVPRNPKYDDVRSRIDTGMTVDKVKYISTSEYLKRRNELFFRLSSNQLHALFAEYEADHE----DVEENKGGGFDGPRVVTIEADEKPSYQRPYLLLDLRTQQEYTQCHIMQARSFPMQMLNQDKMIADLYQYKNKEGQLIVLYCDNEAISSQAGHTLVTRGFDNIFLLTGGLFTFSELHPLYVEG 196
BLAST of mRNA_H-paniculata_contig3806.9981.1 vs. uniprot
Match: A0A7S3HNL5_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HNL5_9STRA) HSP 1 Score: 153 bits (386), Expect = 3.180e-40 Identity = 78/195 (40.00%), Postives = 125/195 (64.10%), Query Frame = 1
Query: 52 LDRKVPRNPRYADIQSKVKTGMTVDKLTFVTTRQHLRRQDEPYYRLAPSQLHELLSEYEQDRQEGVHDFRDHIDPDHHGPKVVVHEADAQPSYERPYLILDVRTPAEFRRCHVTQARSFEGKLLNQDHMTPELYMYKNKEGGLVVLYCNDEREACHAATTLIHRGFDNVFVLSHGIISFARSFQSFVEGDIDALP 636
++R+VP+N +Y+ I+ + TG+TV+K+ F+T R++ +R+DE +YR+ +QL ELL+EYE D E + + ++ K+V + A P YE+PYLILDVR F H+ QARSF ++L +D M E+Y +KNK L+++ C+DE+ + +A ++ RG DNV++L+ GI FA + F+EG A P
Sbjct: 13 MERRVPKNDKYSHIRGTLDTGLTVEKVKFITAREYSKRRDEIFYRINKNQLFELLNEYEVDEYESI------AETTNNSLKIVSYSETAGPVYEKPYLILDVRELDYFNEYHILQARSFPYQMLRRDQMHSEVYRFKNKPETLIIICCDDEKISHESAKVMVDRGVDNVYLLTGGIHEFAYEYPQFIEGRPPAPP 201
BLAST of mRNA_H-paniculata_contig3806.9981.1 vs. uniprot
Match: A0A2D4CAV7_PYTIN (Rhodanese domain-containing protein n=2 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4CAV7_PYTIN) HSP 1 Score: 144 bits (362), Expect = 3.950e-37 Identity = 78/232 (33.62%), Postives = 135/232 (58.19%), Query Frame = 1
Query: 52 LDRKVPRNPRYADIQSKVKTGMTVDKLTFVTTRQHLRRQDEPYYRLAPSQLHELLSEYEQD------------------RQEGVHDFR-----DHIDPDHHGPKVVVHEADAQPSYERPYLILDVRTPAEFRRCHVTQARSFEGKLLNQDHMTPELYMYKNKEGGLVVLYCNDEREACHAATTLIHRGFDNVFVLSHGIISFARSFQSFVEG-DIDALPLDVGQQKATTLAK 675
+++K+P NP+YA+ QSK+ +G TV+K+ ++ ++ L+R+DE + R+ L LL+EYE + +++G + + D+ + GP+VV ++A+ + Y+ PYLILD R EF +T+A+SF LN+D + PE+Y +KN+E L++LY DE+ A TL+ RGFDN++VL+ G++ FA F +EG + P+D ++ + + K
Sbjct: 13 MEKKIPVNPKYANTQSKIDSGTTVNKVRLISHKEFLKRRDETFRRVTVKCLEALLAEYEDNGGCGXGCEEPEMVARMVKKEDGKFELQRVPADDNQSHNASGPRVVSYDAEEREEYDPPYLILDTRPKEEFAVNRITRAKSFPAAFLNRDTLLPEMYKFKNQESKLIILYDQDEKTVTQTAHTLVQRGFDNIYVLTGGLVDFADEFPDRIEGLPLPKKPVDPSKKVSKEVYK 244
BLAST of mRNA_H-paniculata_contig3806.9981.1 vs. uniprot
Match: A0A8K1C345_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C345_PYTOL) HSP 1 Score: 142 bits (359), Expect = 1.090e-36 Identity = 95/276 (34.42%), Postives = 146/276 (52.90%), Query Frame = 1
Query: 46 NALDRKVPRNPRYADIQSKVKTGMTVDKLTFVTTRQHLRRQDEPYYRLAPSQLHELLSEYEQDRQEGVHDFRDHI-------------------DPDHHG----PKVVVHEADAQPSYERPYLILDVRTPAEFRRCHVTQARSFEGKLLNQDHMTPELYMYKNKEGGLVVLYCNDEREACHAATTLIHRGFDNVFVLSHGIISFARSFQSFVEG-DIDALPLDVGQQKATTLAKS---LRRSGHRHLGSGGGGSSISGSVSARDSTNGSVASSVYS 792
N +++K+P NP+YA QSK+ +G TV K+ ++ ++ L+R DE + R++P L EL EYE D V D + + D HG P++V +EA+ Q Y+ PYLILD RT EF + +A++F LN+D + PE++ +KN+E L++LY DE+ A TL+ RGFDNV+VL+ GI+ F+ + +EG + P D ++ + K+ L +G + + S VS R N S ASSV S
Sbjct: 11 NIMEKKIPVNPKYAKTQSKIDSGTTVQKVRLISHKEFLKRLDETFRRVSPKCLEELFGEYE-DGGGSVSDQPEMVAKMVKKSDGKFIMERVPAEDNQSHGGASGPRIVSYEAEEQEEYDPPYLILDTRTKEEFAVNRIHRAKNFPAAYLNRDVLLPEMHRFKNQESKLIILYDQDEKTVTATAHTLVQRGFDNVYVLTGGIVDFSDEYPDRIEGLSLPKKPKDPSKKATKEMYKNAPALSTTGPKSIKS----------VSTRKKDNASDASSVVS 275
BLAST of mRNA_H-paniculata_contig3806.9981.1 vs. uniprot
Match: A0A6A3P2P0_9STRA (Rhodanese domain-containing protein n=5 Tax=Phytophthora TaxID=4783 RepID=A0A6A3P2P0_9STRA) HSP 1 Score: 138 bits (348), Expect = 4.240e-35 Identity = 73/222 (32.88%), Postives = 130/222 (58.56%), Query Frame = 1
Query: 52 LDRKVPRNPRYADIQSKVKTGMTVDKLTFVTTRQHLRRQDEPYYRLAPSQLHELLSEYEQDRQEGVHDF---------------RDHIDPDHH---GPKVVVHEADAQPSYERPYLILDVRTPAEFRRCHVTQARSFEGKLLNQDHMTPELYMYKNKEGGLVVLYCNDEREACHAATTLIHRGFDNVFVLSHGIISFARSFQSFVEGD-IDALPLDVGQQKA 660
+++++P+NPRY + QSK+ +G TV+K+ ++ ++ L+R+DE + R+ L +L EYE + R +D D+ GP++V +EA+ + Y+ PYL+LD RT EF + +A+++ LN+D + PE++ +KN+E LV+LY D++ A A TL+ RGFDN++VL+ G++ +A F +EG + P+D +++A
Sbjct: 13 MEKRIPQNPRYKNTQSKIDSGSTVNKVRLISHKEFLKRRDETFRRITCRCLADLFGEYEDTGSASQPEMVARMVKGADGEFSMERVPVDEDNQESCGPRIVSYEAEEKEDYDPPYLVLDTRTKDEFAANRIHRAKNYPATFLNRDVLLPEMHQFKNQEAKLVILYDLDDKTAAQTAHTLVQRGFDNIYVLTGGLVDYADEFPDHIEGTPLPPKPMDPTKKQA 234
BLAST of mRNA_H-paniculata_contig3806.9981.1 vs. uniprot
Match: W4H7P1_9STRA (Rhodanese domain-containing protein n=5 Tax=Aphanomyces astaci TaxID=112090 RepID=W4H7P1_9STRA) HSP 1 Score: 138 bits (348), Expect = 5.730e-35 Identity = 76/225 (33.78%), Postives = 129/225 (57.33%), Query Frame = 1
Query: 1 MSLRMGSNQRYTPRGNALDRKVPRNPRYADIQSKVKTGMTVDKLTFVTTRQHLRRQDEPYYRLAPSQLHELLSEYEQDRQ----------------EGVHDFRDHIDPD---HHGPKVVVHEADAQPSYERPYLILDVRTPAEFRRCHVTQARSFEGKLLNQDHMTPELYMYKNKEGGLVVLYCNDEREACHAATTLIHRGFDNVFVLSHGIISFARSFQSFVEG 618
MSL+ G++ + +++++P+NP+Y D QSK+ TG TV+K+ +++++ L+R+DE + R+ P L EL +EYE + +G + D H GP+VV ++A+ +Y+ PYLILD R +F + +++SF L +D PE++ +KN E L+VLYC DE+ + +A L +GFDN++VLS G++ +A + VEG
Sbjct: 1 MSLKSGTHNKPKAAMTIMEKRLPQNPKYKDTQSKLDTGSTVNKVRLISSKEFLKRRDETFRRVTPRCLAELFAEYEDTGKGDAAAPEMVARMVKNADGEFVMERQVSDDNQEHAGPRVVSYDAEEGENYDVPYLILDTRPREDFTENRIHRSKSFPTAFLCRDQFLPEMHQFKNHESKLIVLYCLDEKLSIQSANLLGQKGFDNIYVLSGGLMEYAALYPHHVEG 225
BLAST of mRNA_H-paniculata_contig3806.9981.1 vs. uniprot
Match: A0A5D6XXC8_9STRA (Rhodanese domain-containing protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XXC8_9STRA) HSP 1 Score: 137 bits (344), Expect = 1.750e-34 Identity = 79/216 (36.57%), Postives = 126/216 (58.33%), Query Frame = 1
Query: 34 TPRGNALDRKVPRNPRYADIQSKVKTGMTVDKLTFVTTRQHLRRQDEPYYRLAPSQLHELLSEYEQD-----------------RQEGVHDFRDHIDPDHH----GPKVVVHEADAQPSYERPYLILDVRTPAEFRRCHVTQARSFEGKLLNQDHMTPELYMYKNKEGGLVVLYCNDEREACHAATTLIHRGFDNVFVLSHGIISFARSFQSFVEG 618
TP G A+++++P NP+Y ++QSK+ TG TV+K+ ++T++ L+R+DE + R+ S L EL EYE +++G D+ GP+VV ++A+ Q +Y+ PYL+LD R+ EF + +A+SF L +D + PE++ +KN+E LVVLY DE+ A TL+ RGFDN++VL+ G+ +A F VEG
Sbjct: 8 TPLG-AMEKRIPVNPKYKNLQSKIDTGATVNKVRLISTKEFLKRRDETFRRIPCSALAELFEEYEDSGCGGGAAQPEMVARMVQKRDGQLVMERVPAEDNQAAAGGPRVVSYDAEEQEAYDPPYLVLDTRSKDEFAANRIHRAKSFPASHLCRDVLLPEMHRFKNQESKLVVLYDLDEKTVAQTAHTLVQRGFDNIYVLTGGLAEYAELFPDHVEG 222 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig3806.9981.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig3806.9981.1 >prot_H-paniculata_contig3806.9981.1 ID=prot_H-paniculata_contig3806.9981.1|Name=mRNA_H-paniculata_contig3806.9981.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=321bp MSLRMGSNQRYTPRGNALDRKVPRNPRYADIQSKVKTGMTVDKLTFVTTRback to top mRNA from alignment at H-paniculata_contig3806:5836..14949+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig3806.9981.1 ID=mRNA_H-paniculata_contig3806.9981.1|Name=mRNA_H-paniculata_contig3806.9981.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=9114bp|location=Sequence derived from alignment at H-paniculata_contig3806:5836..14949+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig3806:5836..14949+ >mRNA_H-paniculata_contig3806.9981.1 ID=mRNA_H-paniculata_contig3806.9981.1|Name=mRNA_H-paniculata_contig3806.9981.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1926bp|location=Sequence derived from alignment at H-paniculata_contig3806:5836..14949+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |