prot_H-paniculata_contig38.9961.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig38.9961.1
Unique Nameprot_H-paniculata_contig38.9961.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length367
Homology
BLAST of mRNA_H-paniculata_contig38.9961.1 vs. uniprot
Match: A0A6H5L4T7_9PHAE (TFIIB-type domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L4T7_9PHAE)

HSP 1 Score: 173 bits (439), Expect = 2.510e-47
Identity = 122/344 (35.47%), Postives = 180/344 (52.33%), Query Frame = 0
Query:    6 YYEASMKCHECKG-TDIFTDTSAGEVICRECGVVLGERLIDDGAEWRTFNNDDTLYGNRSDPNRCGGAASPLDSGESGMATFISGGNDKKEMRVLQKVQGVAMKMSRSEKNLQ-ERYKDLEEYASRLGLTRETKECACLILQQLNAKGKFNEKSGNSGTRVALAALYHATKERGGSWDLKSFCQIFKDIVNKQNFTKAKRYVEKHLDGIAGKATTTVRGADLVPRIGNELMLRANVILAAKDVAKAATDISLVDGMRPRGVAGASILLACS-----ACAGG------------KWRQRGSEEGKMDVLGLDVVATAAGIGAPTVLKVYKLLYAARESLLTEAFL 330
            Y  ++M C EC   +DI+ D  AGE+ICR C VV+GER IDDGAEW+T+  D      R+DPNRCG AASPL S +SGM T I GG D K    LQK+QG+A+K S SE+ L+ + +  + E+ +RLGLT   +E ACL+L++    G F  K    G  + +A      ++      +K    +F   +      KA     K L  +  +   ++RG   +P + ++L L   V +AA+  A+ A+   LVDGM+P  VA A++LL CS     AC  G            + +Q+ + EG+   +    V+ A G     + + ++ +Y  R  L T  FL
Sbjct:    4 YMGSTMFCKECVAESDIYVDPRAGEIICRTCAVVIGERCIDDGAEWQTYAEDSN--NGRADPNRCGAAASPLLSAKSGMNTLIEGGQDSKLTAKLQKLQGMAVKESASERALKMDFFGKVREFGNRLGLTHAMQEHACLLLRKAEDSGLFKVKKAERGVAICVAVTLLTCRQWRRGQTMKEMSTMFNVSL------KALNKAVKKLSNLEIERAPSLRGEHHIPLLCDKLGLPPFVSVAARHAAQQASRWDLVDGMKPSAVAAAAVLLVCSCWNPAACGDGVVDRRSKKARKTQQQQQAAVEGETWDVRPAAVSEAGGTTVMAMKRPFRAMYEQRGRLFTVEFL 339          
BLAST of mRNA_H-paniculata_contig38.9961.1 vs. uniprot
Match: A0A835YX77_9STRA (TFIIB-type domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YX77_9STRA)

HSP 1 Score: 140 bits (354), Expect = 4.220e-35
Identity = 105/321 (32.71%), Postives = 175/321 (54.52%), Query Frame = 0
Query:   13 CHECKGTDIFTDTSAGEVICRECGVVLGERLIDDGAEWRTFNNDDTLYGNRSDPNRCGGAASPLDSGESGMATFISGGNDKKEMRVLQKVQGVAMKMSRS--EKNLQERYKDLEEYASRLGLTRETKECACLILQQLNAKGKFNEKSGNSGTRVALAALYHATKERGGSWDLKSFCQIFKDI-VNKQNFTKAKRYVEKHLDGIAGK--ATTTVRGADLVPRIGNELMLRANVILAAKDVAKAATDISLVDGMRPRGVAGASILLACSAC-AGGKWRQRGSEEGKMDVLGL--DVVATAAGIGAPTVLKVYKLLYAARESLL 325
            C EC+  DI  D  AG++ICR CG+V+ +R+I+D AEWRT+ +DD    N+ DP+RC GA   L+ G  G  T++ GGN K     L      A K++ +   K +    ++L++   RLG++RE ++ A  +L+QL+  G+F  KSG  G+ +  A LY A K        ++F ++     V+K+   KA ++  +HL   +    A   + G  LVPR+ + L +   V  AAK++A    ++SL+DG++P+ VA A+  LA   C A G      ++       G+  +VVA  A +   ++LK+ ++++  R+ L+
Sbjct:   10 CPECRSRDIVIDFGAGDIICRGCGLVVADRMIEDTAEWRTYADDDR---NKGDPSRCSGA---LEVGF-GSTTYLKGGN-KSNASSLNAACITADKLAGAGITKAMLAALENLDDIGQRLGVSREIRQAAAHLLKQLDKGGRFRRKSGAGGSAMCAAVLYIALKRHRAG---RTFGEMAPAANVDKREVAKAYKHASRHLPPPSNDEAADALILGEHLVPRLCDALGV-PQVSQAAKEIATQCAELSLIDGIKPQVVAAAATWLAAMCCWAAGTLAAAATDSNSCTAAGMAKEVVAERAAVPLSSMLKLCRVVHEHRQHLV 318          
BLAST of mRNA_H-paniculata_contig38.9961.1 vs. uniprot
Match: UPI0006451B5A (hypothetical protein n=1 Tax=Acytostelium subglobosum LB1 TaxID=1410327 RepID=UPI0006451B5A)

HSP 1 Score: 116 bits (290), Expect = 5.830e-26
Identity = 91/318 (28.62%), Postives = 155/318 (48.74%), Query Frame = 0
Query:   10 SMKCHECKGTD--IFTDTSAGEVICRECGVVLGERLIDDGAEWRTFNNDDTLYGNRSDPNRCGGAASPLDSGESGMATFISGGNDKKEMRVLQKVQGVAMKMSRSEKNLQERYKDLEEYASRLGLTRETKECACLILQQLNAKGKFNEKSGNSGTRVALAALYHATKERGGSWDLKSFCQIFKDIVNKQNFTKAKRYVEKHLDGIAGKATTTVRGADLVPRIGNELMLRANVILAAKDVAKAATDISLVDGMRPRGVAGASILLACSACAGGKWRQRGSEEGKMDVLGLDVVATAAGIGAPTVLKVYKLLYAARESLL 325
            ++ C  CK  D  I  D + G++ICRECGVV+G+R++D+ +EWRTF+N ++     SDPNR GG  +PL S +SG++T I  GN K +   L ++Q     ++  ++ L   +K++      +GL +   + A  + +Q+  K       G S      A+LY A + +G +   K  C +  + V+K++  +  + +++ L         +    D + R    L L   +  AA+ V++ AT++ +V G  P  VA ASI +        K  Q+              ++   G+   T+   YK LY  R+SLL
Sbjct:   30 NVTCPVCKNPDPDIVEDYARGDLICRECGVVIGDRIVDEHSEWRTFSNSESTG---SDPNRVGGPTNPLLS-DSGLSTVIGKGNSK-DSGALSRMQNRGA-LASGDRTLLNGFKEISRMGDHMGLPQMVMDTANELYKQMEDKKSLK---GRSADGFLAASLYIACRLKGITRTFKEICALSNN-VSKKDLNRCYKLMKESLSTKVNLQAISTE--DFMTRFCVNLQLPKEIKQAAEHVSRTATELGIVAGKNPISVAAASIYMVSQLSENDKRTQK-------------TISDITGVSEVTIRNAYKDLYPKRDSLL 322          
BLAST of mRNA_H-paniculata_contig38.9961.1 vs. uniprot
Match: D3BMU1_POLPP (Transcription initiation factor IIB n=1 Tax=Polysphondylium pallidum (strain ATCC 26659 / Pp 5 / PN500) TaxID=670386 RepID=D3BMU1_POLPP)

HSP 1 Score: 115 bits (288), Expect = 1.240e-25
Identity = 97/325 (29.85%), Postives = 161/325 (49.54%), Query Frame = 0
Query:   13 CHECKGTD--IFTDTSAGEVICRECGVVLGERLIDDGAEWRTFNNDDTLYGNRSDPNRCGGAASPLDSGESGMATFISGGNDKKEMRVLQKVQGVAMKMSRSEKNLQERYKDLEEYASRLGLTRETKECACLILQQLNAKGKFNEKSGNSGTRVALAALYHATKERGGSWDLKSFCQIFKDIVNKQNFTKAKRYVEKHLDGIAGKATTTVRGADLVPRIGNELMLRANVILAAKDVAKAATDISLVDGMRPRGVAGASILLACSACAGGKWRQRGSEEGKMDVLGLDVVATAAGIGAPTVLKVYKLLYAARESLL--TEAFLASV 333
            CH C+  D  I  D + G++ICRECGVVLG+R++D+ +EWRTF+N ++     SDPNR GG  +PL   +SG++T I  G  K +   L ++Q     ++  +++L   +K++   A  +GL +  ++ A  + ++++ K       G S   +  A+LY A +  G +   K  C +  ++  K      K   E   + I  +A +T    D + R    L L  +V  AA+ V++ A ++ +V G  P  VA ASI +  S  +  K  Q+             +++  +G+   T+   YK LY  RE LL     FL +V
Sbjct:   40 CHICQNPDPDIVEDYAKGDLICRECGVVLGDRIVDEHSEWRTFSNSESTG---SDPNRVGGPTNPL-LRDSGLSTVIGKGTSK-DSSALSRMQNRGA-LANGDRSLLAGFKEIARMADHMGLPQTVQDTANELFREMDDKKSMK---GRSADGILAASLYIACRIEGITRTFKEICALSNNVSKKDLGRCYKMMKEALANRINLQAIST---EDFMTRFCTNLNLPLDVKRAAEHVSRTAMELGIVAGKNPISVAAASIYMV-SQLSPEKRTQK-------------MISDISGVSEVTIRNAYKDLYIKREQLLPPNSPFLTNV 338          
BLAST of mRNA_H-paniculata_contig38.9961.1 vs. uniprot
Match: A7SH79_NEMVE (Transcription initiation factor IIB n=2 Tax=Nematostella vectensis TaxID=45351 RepID=A7SH79_NEMVE)

HSP 1 Score: 114 bits (284), Expect = 2.460e-25
Identity = 93/329 (28.27%), Postives = 159/329 (48.33%), Query Frame = 0
Query:    8 EASMKCHECKGTDIFTDTSAGEVICRECGVVLGERLIDDGAEWRTFNNDDTLYGNRSDPNRCGGAASPLDSGESGMATFI---SGGNDKKEMRVLQKVQGVAMKMSRSEKNLQERYKDLEEYASRLGLTRETKECACLILQQLNAKGKFNEKSGNSGTRVALAALYHATKERGGSWDLKSFCQIFKDIVNKQNFTKAKRYVEKHLDGIAGKATTTVRGADLVPRIGNELMLRANVILAAKDVAKAATDISLVDGMRPRGVAGASILLACSACAGGKWRQRGSEEGKMDVLGLDVVATAAGIGAPTVLKVYKLLYAARESLLTEAFLASV 333
            E S+ C       +  D  AG++IC ECG+V+G+R++D G+EWRTF+N+       SDP+R G A +PL SG   ++T I   SGGN   ++    +       MS ++++L   ++++   A R+ L R+  + A  + +Q++ +       G S   +A A LY A ++ G    LK  C I K  ++K+   +  + + KHL+     +   +   D + R  + L L  +V  AA  +A+ A ++ LV G  P  +A A+I +A  A       +R  +E          +   AG+   T+ + Y+LL+     L    F  +V
Sbjct:    4 EKSVACRHHPDAPLIEDYRAGDMICSECGLVVGDRVVDVGSEWRTFSNEKAT----SDPSRVGAAQNPLLSGGD-LSTLIEKPSGGNA--DIEGFARTHNSRSGMSGADRSLMNAFREISIMADRINLPRKIVDRANQLFKQVHEQKSLK---GRSNDTIASACLYIACRQEGVPRTLKEICAIGK--ISKKEIGRCFKLILKHLE----TSVDLITSGDFMSRFCSNLTLPLSVQKAATYIARRAVELDLVAGRSPISIAAAAIYMASQASE----EKRSQKE----------IGDIAGVADVTIRQSYRLLFPKARELFPADFKFAV 302          
BLAST of mRNA_H-paniculata_contig38.9961.1 vs. uniprot
Match: F4QDI6_CAVFA (Transcription initiation factor IIB n=1 Tax=Cavenderia fasciculata (strain SH3) TaxID=1054147 RepID=F4QDI6_CAVFA)

HSP 1 Score: 111 bits (277), Expect = 3.480e-24
Identity = 87/315 (27.62%), Postives = 158/315 (50.16%), Query Frame = 0
Query:   13 CHECKGTD--IFTDTSAGEVICRECGVVLGERLIDDGAEWRTFNNDDTLYGNRSDPNRCGGAASPLDSGESGMATFISGGNDKKEMRVLQKVQGVAMKMSRSEKNLQERYKDLEEYASRLGLTRETKECACLILQQLNAKGKFNEKSGNSGTRVALAALYHATKERGGSWDLKSFCQIFKDIVNKQNFTKAKRYVEKHLDGIAGKATTTVRGADLVPRIGNELMLRANVILAAKDVAKAATDISLVDGMRPRGVAGASILLACSACAGGKWRQRGSEEGKMDVLGLDVVATAAGIGAPTVLKVYKLLYAARESLL 325
            C  CK  D  +  D + G++ICR CG V+G+R++D+ +EWRTF+N ++     +DPNR GG  +PL   E G++T I  G  K +  VL ++Q     +   +++L   +K++E+ +  +GL +  ++ A  + +Q++ +     KS +    +  A+LY A +  G +   K  C +  + V+K+   K  + + + L  +   +   +   D + R  + L L  +V  AA  V++ A D+ +V G  P  V  A+I L     A  + ++               ++  +G+   T+  VYK LY+ R+SLL
Sbjct:   27 CPVCKDPDPDVVEDYARGDLICRRCGCVIGDRIVDEHSEWRTFSNSESTG---ADPNRVGGPNNPL-LREGGLSTVIGKGTGK-DASVLSRMQNRGA-LGSGDRSLLAAFKEIEKMSDHIGLPQTVQDTAKELFRQMDDRKPMKGKSADG---MLAASLYMACRIDGIARTFKEVCALSNN-VSKKELAKCYKQMREALGDV--HSLHAISTDDFMTRFCSNLSLPNDVKKAADHVSRTAIDLGIVAGKNPLSVTAAAIYLVSQLSADKRTQK--------------AISDVSGVSEVTIRNVYKDLYSKRDSLL 315          
BLAST of mRNA_H-paniculata_contig38.9961.1 vs. uniprot
Match: A0A152A9B4_9MYCE (Transcription initiation factor IIB n=1 Tax=Tieghemostelium lacteum TaxID=361077 RepID=A0A152A9B4_9MYCE)

HSP 1 Score: 108 bits (270), Expect = 3.720e-23
Identity = 97/326 (29.75%), Postives = 155/326 (47.55%), Query Frame = 0
Query:    1 MSRPYYYEASMKCHECKGTD--IFTDTSAGEVICRECGVVLGERLIDDGAEWRTFNNDDTLYGNRSDPNRCGGAASPLDSGESGMATFISGGNDKKEMRVLQKVQGVAMKMSRSEKNLQERYKDLEEYASRLGLTRETKECACLILQQLNAKGKFNEKSGNSGTRVALAALYHATKERGGSWDLKSFCQIFKDIVNKQNFTKAKRYVEKHLDGIAGKATTTVRGADLVPRIGNELMLRANVILAAKDVAKAATDISLVDGMRPRGVAGASILLACSACAGGKWRQRGSEEGKMDVLGLDVVATAAGIGAPTVLKVYKLLYAARESL 324
            + + Y     + C  CK  D  I  D + G++ICR CGVVLG+R+ID+ +EWRTF+N ++     +DPNR GG  +PL   E+ ++T I  G   K+   L K+Q     +   ++NL   + ++     RLGL +   + A  + + ++ +     KS +    +  AALY A +  G +   K    I    V K + ++  + ++  L       T T    D + R  +EL L  +V  +A+ V+K A D+ +V G  P  V  ASI +  S C+  K  Q+              ++  +GI   T+   YK LY  RESL
Sbjct:   23 IKKKYGLLIKLTCPVCKNNDPDIVEDYAKGDLICRGCGVVLGDRIIDEHSEWRTFSNSESTG---ADPNRVGGPTNPL-LREAALSTTI--GKGAKDTGSLSKLQN-RNALGSGDRNLLAAFSEIGRMVDRLGLPQTIHDKANELYRMMDDRKPLRGKSADG---MMAAALYMACRIDGTTRQFKEIA-ILTSNVTKVDISRCYKTMKDSLSDYISLQTIT--SEDFITRYCSELKLPLDVKKSAEHVSKTAQDMGIVSGKSPISVTAASIYMV-SQCSTEKRSQK-------------EISNISGISEVTIKNTYKDLYNHRESL 321          
BLAST of mRNA_H-paniculata_contig38.9961.1 vs. uniprot
Match: UPI00158B3586 (transcription initiation factor IIB n=1 Tax=Chelonus insularis TaxID=460826 RepID=UPI00158B3586)

HSP 1 Score: 107 bits (268), Expect = 4.820e-23
Identity = 95/330 (28.79%), Postives = 152/330 (46.06%), Query Frame = 0
Query:   13 CHECKGTDIFTDTSAGEVICRECGVVLGERLIDDGAEWRTFNNDDTLYGNRSDPNRCGGAASPLDSGES---------GMATFISGGNDKKEMRVLQKVQGVAMKMSRSEKNLQERYKDLEEYASRLGLTRETKECACLILQQL----NAKGKFNEKSGNSGTRVALAALYHATKERGGSWDLKSFCQIFKDIVNKQNFTKAKRYVEKHLDGIAGKATTTVRGADLVPRIGNELMLRANVILAAKDVAKAATDISLVDGMRPRGVAGASILLACSACAGGKWRQRGSEEGKMDVLGLDVVATAAGIGAPTVLKVYKLLYAARESLLTEAF 329
            C+      +  D  AG+ IC ECG+V+GER+ID G+EWRTFNN+ +      DP+R GG  +PL SG +         G A++ S G  K + R           MS S++ L   ++++ + A R+ ++R   + A L+ +Q+    N KG+ N+        +A A LY A ++ G     K  C + K  ++K+   +  + + K L+      TT     D + R  + L L   V  AA  +A+ A +I +V G  P  V  A+I +A  A    K ++               +   AG+   T+ + YKL+Y     L  E F
Sbjct:   14 CYSHPDAPLIEDYRAGDQICSECGLVVGERVIDVGSEWRTFNNEKSGV----DPSRVGGPENPLLSGSNLSTIIGPATGAASYDSFGAPKYQNR---------RTMSSSDRALTNAFREINDMADRINMSRTIIDRANLLFKQVHDGKNLKGRSNDA-------IASACLYIACRQEGVPRTFKEICAVSK--ISKKEIGRCFKLILKALETSVELITT----GDFMSRFCSNLGLPNMVQRAATHIARKAVEIDIVPGRSPISVTAAAIYMASQASDDKKSQKE--------------IGDIAGVADVTIRQSYKLMYPHAAKLFPEDF 303          
BLAST of mRNA_H-paniculata_contig38.9961.1 vs. uniprot
Match: A0A397TUD0_9GLOM (Cyclin-like protein n=1 Tax=Gigaspora rosea TaxID=44941 RepID=A0A397TUD0_9GLOM)

HSP 1 Score: 107 bits (268), Expect = 6.210e-23
Identity = 99/320 (30.94%), Postives = 157/320 (49.06%), Query Frame = 0
Query:   13 CHECKGT--DIFTDTSAGEVICRECGVVLGERLIDDGAEWRTFNNDDTLYGNRSDPNRCGGAASPLDSGESGMATFIS---GGNDKKEMRVLQKVQGVAMKMSRSEKNLQERYKDLEEYASRLGLTRETKECACLILQQLNAKGKFNEKSGNSGTRVALAALYHATKERGGSWDLKSFCQIFKDIVNKQNFTKAKRYVEKHLDGIAGKATTTVRGADLVPRIGNELMLRANVILAAKDVAKAATDISLVDGMRPRGVAGASILLACSACAGGKWRQRGSEEGKMDVLGLDVVATAAGIGAPTVLKVYKLLYAARESLLTE 327
            C +CK T  +I  + ++G+++C +CG+VLG+R+ID  +EWRTF ND+       DP+R G AA PL  G S + T IS   GG+     R L KV G A  + + EKNL + YK++   A  +GLTR   + A  + +++  +     KS  S   +  A ++ A ++       K  C I +  V K+   +  + + +  +       TT+   DL+ R  + L LR  +  AA D+      +  ++G  P  VA A I +A  +C    + Q  S +          VA   G+   T+   YKLL+A RE LL++
Sbjct:   30 CPDCKNTTPNIIEEFASGDLVCGDCGLVLGDRIIDTRSEWRTFANDEG-----DDPSRVGAAADPLLDG-SQLDTIISRRDGGSGT--ARDLNKVHGRANAI-KGEKNLVQAYKEIAAMADAIGLTRLIADIAKQLYKRVEEEKLLRGKSTES---IIAACIFIACRQENVPRTFKEICAITR--VPKKEIGRCFKTLIRTFE----TNVTTMTSEDLMSRFCSRLHLRMEIQKAALDLTITTKSLGTLEGKSPVSVAAACIYMA--SCL---YNQPQSTKD---------VAQVTGVSEVTIKNSYKLLFAVREKLLSD 317          
BLAST of mRNA_H-paniculata_contig38.9961.1 vs. uniprot
Match: A0A3R7QY46_PENVA (Transcription initiation factor IIB n=13 Tax=Decapoda TaxID=6683 RepID=A0A3R7QY46_PENVA)

HSP 1 Score: 106 bits (265), Expect = 1.220e-22
Identity = 91/330 (27.58%), Postives = 152/330 (46.06%), Query Frame = 0
Query:   13 CHECKGTDIFTDTSAGEVICRECGVVLGERLIDDGAEWRTFNNDDTLYGNRSDPNRCGGAASPLDSGE---------SGMATFISGGNDKKEMRVLQKVQGVAMKMSRSEKNLQERYKDLEEYASRLGLTRETKECACLILQQL----NAKGKFNEKSGNSGTRVALAALYHATKERGGSWDLKSFCQIFKDIVNKQNFTKAKRYVEKHLDGIAGKATTTVRGADLVPRIGNELMLRANVILAAKDVAKAATDISLVDGMRPRGVAGASILLACSACAGGKWRQRGSEEGKMDVLGLDVVATAAGIGAPTVLKVYKLLYAARESLLTEAF 329
            C +     +  D  AG+ IC ECG+V+G+R+ID G+EWRTF+N+       SDP+R GGA +PL +G          +G A+F   G  K + R           MS S++ L   ++++   A ++ L +   + A ++ +Q+    N KG+ N+        +A A+LY A ++ G     K  C + K  ++K+   +  + + K L+      TT     D + R  + L L   V   A  +A+ A D+ +V G  P  VA A+I +A  A    + ++               +   AG+   T+ + YKL+Y   + L  E F
Sbjct:   12 CPQHPEAHLIEDYRAGDQICSECGLVVGDRVIDVGSEWRTFSNEKA----NSDPSRVGGAENPLLNGSDLSTIIGPGTGSASFDGFGGSKYQNR---------RSMSSSDRALINAFREISNMADKINLPKAITDRANMLFKQVHDGKNLKGRSNDA-------IASASLYIACRQEGVPRTFKEICAVSK--ISKKEIGRCFKLILKALETQVDLITT----GDFMSRFCSNLGLPTAVQKGATHIARKAVDLDIVPGRSPISVAAAAIYMASQASEDKRTQKE--------------IGDIAGVADVTIRQSYKLMYPRAKELFPEDF 301          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig38.9961.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L4T7_9PHAE2.510e-4735.47TFIIB-type domain-containing protein n=2 Tax=Ectoc... [more]
A0A835YX77_9STRA4.220e-3532.71TFIIB-type domain-containing protein n=1 Tax=Tribo... [more]
UPI0006451B5A5.830e-2628.62hypothetical protein n=1 Tax=Acytostelium subglobo... [more]
D3BMU1_POLPP1.240e-2529.85Transcription initiation factor IIB n=1 Tax=Polysp... [more]
A7SH79_NEMVE2.460e-2528.27Transcription initiation factor IIB n=2 Tax=Nemato... [more]
F4QDI6_CAVFA3.480e-2427.62Transcription initiation factor IIB n=1 Tax=Cavend... [more]
A0A152A9B4_9MYCE3.720e-2329.75Transcription initiation factor IIB n=1 Tax=Tieghe... [more]
UPI00158B35864.820e-2328.79transcription initiation factor IIB n=1 Tax=Chelon... [more]
A0A397TUD0_9GLOM6.210e-2330.94Cyclin-like protein n=1 Tax=Gigaspora rosea TaxID=... [more]
A0A3R7QY46_PENVA1.220e-2227.58Transcription initiation factor IIB n=13 Tax=Decap... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000812Transcription factor TFIIBPRINTSPR00685TIFACTORIIBcoord: 259..275
score: 31.76
coord: 225..243
score: 33.68
coord: 65..86
score: 26.97
coord: 194..209
score: 20.0
coord: 25..45
score: 48.25
coord: 47..60
score: 45.71
IPR000812Transcription factor TFIIBPANTHERPTHR11618TRANSCRIPTION INITIATION FACTOR IIB-RELATEDcoord: 9..327
IPR013137Zinc finger, TFIIB-typePFAMPF08271TF_Zn_Ribboncoord: 11..53
e-value: 8.9E-14
score: 50.7
IPR013137Zinc finger, TFIIB-typePROSITEPS51134ZF_TFIIBcoord: 9..40
score: 8.79
NoneNo IPR availableGENE3D1.10.472.170coord: 11..209
e-value: 7.7E-39
score: 135.5
NoneNo IPR availableGENE3D1.10.472.10coord: 222..335
e-value: 2.6E-11
score: 45.5
NoneNo IPR availablePANTHERPTHR11618:SF13TRANSCRIPTION INITIATION FACTOR IIBcoord: 9..327
NoneNo IPR availableSUPERFAMILY57783Zinc beta-ribboncoord: 6..57
IPR013150Transcription factor TFIIB, cyclin-like domainPFAMPF00382TFIIBcoord: 226..276
e-value: 2.0E-6
score: 27.7
IPR036915Cyclin-like superfamilySUPERFAMILY47954Cyclin-likecoord: 223..326
IPR036915Cyclin-like superfamilySUPERFAMILY47954Cyclin-likecoord: 116..210

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig38contigH-paniculata_contig38:3786..8983 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig38.9961.1mRNA_H-paniculata_contig38.9961.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig38 739..9053 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig38.9961.1 ID=prot_H-paniculata_contig38.9961.1|Name=mRNA_H-paniculata_contig38.9961.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=367bp
MSRPYYYEASMKCHECKGTDIFTDTSAGEVICRECGVVLGERLIDDGAEW
RTFNNDDTLYGNRSDPNRCGGAASPLDSGESGMATFISGGNDKKEMRVLQ
KVQGVAMKMSRSEKNLQERYKDLEEYASRLGLTRETKECACLILQQLNAK
GKFNEKSGNSGTRVALAALYHATKERGGSWDLKSFCQIFKDIVNKQNFTK
AKRYVEKHLDGIAGKATTTVRGADLVPRIGNELMLRANVILAAKDVAKAA
TDISLVDGMRPRGVAGASILLACSACAGGKWRQRGSEEGKMDVLGLDVVA
TAAGIGAPTVLKVYKLLYAARESLLTEAFLASVMPRTGKGEGSGKGGKGV
REENRRSAVDDIPFVA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000812TFIIB
IPR013137Znf_TFIIB
IPR013150TFIIB_cyclin
IPR036915Cyclin-like_sf