prot_H-paniculata_contig3781.9927.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig3781.9927.1
Unique Nameprot_H-paniculata_contig3781.9927.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length127
Homology
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BLAST of mRNA_H-paniculata_contig3781.9927.1 vs. uniprot
Match: D7FMV2_ECTSI (Similar to kinesin-related protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FMV2_ECTSI)

HSP 1 Score: 60.5 bits (145), Expect = 4.350e-8
Identity = 57/171 (33.33%), Postives = 68/171 (39.77%), Query Frame = 0 
Query:    1 DVVGGGPGGGTLLVYTNSSSQEATKGASVGG----GRAPIPVHS--------------SAASFQPFVQIASWGRGYFNPLMRLTSTSLTLEGE--------------------QXXXXXXXXXXIRTRSGDLEIAPAADLHITVG-PEPNGEV-----RVDATGPNGTISL 127
            D VGG  GGG LL+ T +     T G+S       G    P+ S                  F+PF+Q+ASWGRG FNPL + T   + L G                     +          IRTR G LEI PA DLH+  G   P GEV      V A G  G I L
Sbjct:  198 DAVGGEMGGGNLLM-TQAPIANVTGGSSCWPPHRKGNFSDPIASVDEYRVDKDSSHVGRDGCFEPFLQLASWGRGRFNPLAQFTPREILLGGVGGGERRSVPPEAPLGTRPEGKNTTSDKVMHAIRTREGGLEIVPAGDLHLQSGVARPGGEVLGGDVHVAARGEQGLIRL 367
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BLAST of mRNA_H-paniculata_contig3781.9927.1 vs. uniprot
Match: A0A6H5KPL0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KPL0_9PHAE)

HSP 1 Score: 57.4 bits (137), Expect = 5.150e-7
Identity = 39/109 (35.78%), Postives = 49/109 (44.95%), Query Frame = 0 
Query:   45 FQPFVQIASWGRGYFNPLMRLTSTSLTLEGE--------------------QXXXXXXXXXXIRTRSGDLEIAPAADLHITVGPEP------NGEVRVDATGPNGTISL 127
            F+PF+Q+ASWG+G FNPL +  S  L L G                     +          IRTR G L+IAPA DLH+  G          G+V V A G +G I L
Sbjct:  258 FEPFLQLASWGQGRFNPLAQFASRELLLGGVSGGERRSAPTEAPLGTRPAGKNTTGGNVMHAIRTREGGLKIAPAGDLHLQSGIARAGGEVLGGDVHVAARGEHGLIRL 366
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig3781.9927.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FMV2_ECTSI4.350e-833.33Similar to kinesin-related protein n=1 Tax=Ectocar... [more]
A0A6H5KPL0_9PHAE5.150e-735.78Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig3781contigH-paniculata_contig3781:3712..6083 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig3781.9927.1mRNA_H-paniculata_contig3781.9927.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig3781 3712..6084 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig3781.9927.1 ID=prot_H-paniculata_contig3781.9927.1|Name=mRNA_H-paniculata_contig3781.9927.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=127bp
DVVGGGPGGGTLLVYTNSSSQEATKGASVGGGRAPIPVHSSAASFQPFVQ
IASWGRGYFNPLMRLTSTSLTLEGEQQKSTETETTTIRTRSGDLEIAPAA
DLHITVGPEPNGEVRVDATGPNGTISL
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