prot_H-paniculata_contig3781.9928.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig3781.9928.1
Unique Nameprot_H-paniculata_contig3781.9928.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length263
Homology
[Close]
BLAST of mRNA_H-paniculata_contig3781.9928.1 vs. uniprot
Match: D7FMV2_ECTSI (Similar to kinesin-related protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FMV2_ECTSI)

HSP 1 Score: 65.5 bits (158), Expect = 2.320e-8
Identity = 55/159 (34.59%), Postives = 76/159 (47.80%), Query Frame = 0 
Query:  102 FLNLTGELATIGGPWG-----ASLDADHEVRLRANDSSLVRVSSEGIFLENTTVLVLRSSSQ----------------PRLITLPPTRIPPLSQPARSPGLGGDSVVTM------DGGNIVMNASQSFDFDIPGALIKLSRRCGDSTRGSDCVAKAGRE 233
            +LNL+ E ATIGGP G     A L+AD EVRLRA++SSL+RVS+  + + +T  + LRSSS                        P + PP +   + PG  G            D G + + AS S   + PGA ++LS R      G D +A  GR+
Sbjct:  569 YLNLSVEAATIGGPQGGEGGGALLEADDEVRLRASNSSLLRVSAAEVSV-HTPAIFLRSSSPLTAAAXXXXXXXXXXXXXXXXXXPPQQPPQTTGRQDPGARGPGPTAAAELSLDDSGGVAVTASGSIGMETPGAFVQLSGR----RSGGDGLAAGGRD 722
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig3781.9928.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FMV2_ECTSI2.320e-834.59Similar to kinesin-related protein n=1 Tax=Ectocar... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig3781contigH-paniculata_contig3781:6686..7956 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig3781.9928.1mRNA_H-paniculata_contig3781.9928.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig3781 6152..7956 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig3781.9928.1 ID=prot_H-paniculata_contig3781.9928.1|Name=mRNA_H-paniculata_contig3781.9928.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=263bp
MSLIYQALVDAVEITGTTGASLISCNGPVLLDSNGGNSSLLLDTDSILAT
AETVTLRGYHAMGSTTSARKPSIEAHPPRSDAVGESQRRGAAGPGGNPSG
SFLNLTGELATIGGPWGASLDADHEVRLRANDSSLVRVSSEGIFLENTTV
LVLRSSSQPRLITLPPTRIPPLSQPARSPGLGGDSVVTMDGGNIVMNASQ
SFDFDIPGALIKLSRRCGDSTRGSDCVAKAGRESGTSRSSVCVKDDEASL
LADADTVEILGRS
back to top