prot_H-paniculata_contig3777.9916.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-paniculata_contig3777.9916.1
Unique Name	prot_H-paniculata_contig3777.9916.1
Type	polypeptide
Organism	Halopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length	236

Homology

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BLAST of mRNA_H-paniculata_contig3777.9916.1 vs. uniprot
Match: D7G1U6_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G1U6_ECTSI)

HSP 1 Score: 330 bits (846), Expect = 5.400e-113
Identity = 174/185 (94.05%), Postives = 178/185 (96.22%), Query Frame = 0

Query:   51 MSALEEKSQATDAAGADESEDTRSVHLVSQEGESFDIKASVAKMSNLVKTMITDEDGDEEGEAQEIPLPNVKASVLSKVIEFCKHYKEDPMNEIEKPLKSANMHDVVQEWYAKFVEVQQETLFELILAANYMDIKPLLDLTCATVASMIKGKTAEEIRKTFNIVNDFTPEEEAQVREENKWCEDA 235
            MSALEEKSQA DA  ADE+EDTRSVHLVSQEGESFDIK SVAKMSNLVKTMI DED +E+G+AQEIPLPNVKASVLSKVIEFC HYKEDPMNEIEKPLKSANMHDVVQEWYAKFVEVQQETLFELILAANYMDIKPLLDLTCATVASMIKGKTAEEIRKTFNIVNDFTPEEEAQVREENKWCEDA
Sbjct:    1 MSALEEKSQAADAP-ADETEDTRSVHLVSQEGESFDIKVSVAKMSNLVKTMI-DEDAEEDGDAQEIPLPNVKASVLSKVIEFCAHYKEDPMNEIEKPLKSANMHDVVQEWYAKFVEVQQETLFELILAANYMDIKPLLDLTCATVASMIKGKTAEEIRKTFNIVNDFTPEEEAQVREENKWCEDA 183

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BLAST of mRNA_H-paniculata_contig3777.9916.1 vs. uniprot
Match: A0A835Z9K0_9STRA (Skp1 family, dimerization domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z9K0_9STRA)

HSP 1 Score: 277 bits (709), Expect = 4.430e-92
Identity = 140/173 (80.92%), Postives = 158/173 (91.33%), Query Frame = 0

Query:   63 AAGADESEDTRSVHLVSQEGESFDIKASVAKMSNLVKTMITDEDGDEEGEAQEIPLPNVKASVLSKVIEFCKHYKEDPMNEIEKPLKSANMHDVVQEWYAKFVEVQQETLFELILAANYMDIKPLLDLTCATVASMIKGKTAEEIRKTFNIVNDFTPEEEAQVREENKWCEDA 235
            AA   ++EDTR+V+LVSQEG+SFD+   VAKMS LVKTMI D+D DE+ EAQEIPLPNVK+SVL+K+IEFC+HY EDPMNEIEKPLKSANM +VVQ+W+A FV+V+QE LFELILAANYMDIKPLLDLTCATVASMIKGKT EEIRKTFNIVNDFTPEEEAQVREENKWCE+A
Sbjct:   16 AATETQAEDTRTVNLVSQEGDSFDVSIKVAKMSELVKTMI-DDDADEDAEAQEIPLPNVKSSVLTKIIEFCRHYIEDPMNEIEKPLKSANMQEVVQDWFANFVQVEQELLFELILAANYMDIKPLLDLTCATVASMIKGKTPEEIRKTFNIVNDFTPEEEAQVREENKWCEEA 187

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BLAST of mRNA_H-paniculata_contig3777.9916.1 vs. uniprot
Match: A0A836CN28_9STRA (Skp1 family, dimerization domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CN28_9STRA)

HSP 1 Score: 273 bits (698), Expect = 1.760e-90
Identity = 138/173 (79.77%), Postives = 156/173 (90.17%), Query Frame = 0

Query:   63 AAGADESEDTRSVHLVSQEGESFDIKASVAKMSNLVKTMITDEDGDEEGEAQEIPLPNVKASVLSKVIEFCKHYKEDPMNEIEKPLKSANMHDVVQEWYAKFVEVQQETLFELILAANYMDIKPLLDLTCATVASMIKGKTAEEIRKTFNIVNDFTPEEEAQVREENKWCEDA 235
            A  A  +E+TR+VHLVSQEG+SFD+   VAKMS LVKTM+ DE+ +E+ EAQEIPLPNVK+SVL+KVIEFC+HY EDPMNEIEKPLKSANM +VVQ W+A +V+V+QE LFELILAANYMDIKPLLDLTCATVASMIKGKT EEIRKTFNIVNDFTPEEEAQVREENKWCE+A
Sbjct:   11 AEAAPTAEETRTVHLVSQEGDSFDVSVKVAKMSELVKTML-DEELEEDAEAQEIPLPNVKSSVLTKVIEFCRHYVEDPMNEIEKPLKSANMQEVVQNWFATYVQVEQEVLFELILAANYMDIKPLLDLTCATVASMIKGKTPEEIRKTFNIVNDFTPEEEAQVREENKWCEEA 182

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BLAST of mRNA_H-paniculata_contig3777.9916.1 vs. uniprot
Match: A0A7S2SQM9_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SQM9_9STRA)

HSP 1 Score: 271 bits (693), Expect = 1.010e-89
Identity = 143/185 (77.30%), Postives = 159/185 (85.95%), Query Frame = 0

Query:   51 MSALEEKSQATDAAGADESEDTRSVHLVSQEGESFDIKASVAKMSNLVKTMITDEDGDEEGEAQEIPLPNVKASVLSKVIEFCKHYKEDPMNEIEKPLKSANMHDVVQEWYAKFVEVQQETLFELILAANYMDIKPLLDLTCATVASMIKGKTAEEIRKTFNIVNDFTPEEEAQVREENKWCEDA 235
            M+A EEK+ A D   A+E ED  +V LVSQEG++F ++A VAKMS LVKTM+ DED  E  E QEIPLPNVK+SVL KVIEFC+HYKEDPM EIEKPLKS+ M +VVQEWYA FV+V+QE LFELILAANYMDIKPLLDLTCATVASMIKGKT EEIRKTFNIVNDFTPEEEAQVREENKWCE+A
Sbjct:    1 MAAAEEKNGA-DPMVAEEEEDEGNVQLVSQEGDNFQVEAKVAKMSELVKTMLPDED--EGDEVQEIPLPNVKSSVLGKVIEFCRHYKEDPMTEIEKPLKSSTMSEVVQEWYATFVDVEQEVLFELILAANYMDIKPLLDLTCATVASMIKGKTPEEIRKTFNIVNDFTPEEEAQVREENKWCEEA 182

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BLAST of mRNA_H-paniculata_contig3777.9916.1 vs. uniprot
Match: A0A7S3HQT9_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HQT9_9STRA)

HSP 1 Score: 265 bits (677), Expect = 1.710e-87
Identity = 136/168 (80.95%), Postives = 152/168 (90.48%), Query Frame = 0

Query:   68 ESEDTRSVHLVSQEGESFDIKASVAKMSNLVKTMITDEDGDEEGEAQEIPLPNVKASVLSKVIEFCKHYKEDPMNEIEKPLKSANMHDVVQEWYAKFVEVQQETLFELILAANYMDIKPLLDLTCATVASMIKGKTAEEIRKTFNIVNDFTPEEEAQVREENKWCEDA 235
            E++D R++HLVSQEGE FD+  SV KMS LVKTMI DED +EE EAQEIPLPNVK+++LSKVIEF KHYKE+PMNEIEKPLKSANM +VVQEWY+ F+ V QE LFELILAANYMDIKPLLDLTCATVASMIKGK+ E+IRKTFNIVNDFTPEEEAQVREENKWCE+A
Sbjct:    3 EADDNRTIHLVSQEGECFDVPISVGKMSELVKTMI-DEDQNEE-EAQEIPLPNVKSAILSKVIEFTKHYKEEPMNEIEKPLKSANMAEVVQEWYSNFIAVDQEILFELILAANYMDIKPLLDLTCATVASMIKGKSPEDIRKTFNIVNDFTPEEEAQVREENKWCEEA 168

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BLAST of mRNA_H-paniculata_contig3777.9916.1 vs. uniprot
Match: A0A7S2BM50_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2BM50_9STRA)

HSP 1 Score: 263 bits (673), Expect = 1.150e-86
Identity = 136/185 (73.51%), Postives = 159/185 (85.95%), Query Frame = 0

Query:   51 MSALEEKSQATDAAGADESEDTRSVHLVSQEGESFDIKASVAKMSNLVKTMITDEDGDEEGEAQEIPLPNVKASVLSKVIEFCKHYKEDPMNEIEKPLKSANMHDVVQEWYAKFVEVQQETLFELILAANYMDIKPLLDLTCATVASMIKGKTAEEIRKTFNIVNDFTPEEEAQVREENKWCEDA 235
            M+A + + +  D   ADE +D + V LVSQEG++F ++  VAKMS LVKTMI +E+ D E + QEIPLPNVK+ +L KV+EFCKHY E+PMNEIEKPLKS+NMH+VVQEWYA +VEV+QETLFELILAANYMDIKPLLDLTCATVASMIKGKT E+IRKTFNIVNDFTPEEEAQVREENKWCE+A
Sbjct:    1 MAAEQTEDKKIDEPEADE-DDGKMVDLVSQEGDNFQVEKRVAKMSELVKTMIPEEE-DGETDQQEIPLPNVKSQILGKVMEFCKHYCEEPMNEIEKPLKSSNMHEVVQEWYANYVEVEQETLFELILAANYMDIKPLLDLTCATVASMIKGKTPEDIRKTFNIVNDFTPEEEAQVREENKWCEEA 183

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BLAST of mRNA_H-paniculata_contig3777.9916.1 vs. uniprot
Match: A0A7S3JW81_9STRA (Hypothetical protein n=3 Tax=Pelagomonadales TaxID=54409 RepID=A0A7S3JW81_9STRA)

HSP 1 Score: 265 bits (677), Expect = 3.760e-86
Identity = 136/184 (73.91%), Postives = 157/184 (85.33%), Query Frame = 0

Query:   53 ALEEKSQATDAAGAD-ESEDTRSVHLVSQEGESFDIKASVAKMSNLVKTMITDEDGDEEGEAQEIPLPNVKASVLSKVIEFCKHYKEDPMNEIEKPLKSANMHDVVQEWYAKFVEVQQETLFELILAANYMDIKPLLDLTCATVASMIKGKTAEEIRKTFNIVNDFTPEEEAQVREENKWCEDA 235
            A EEK       G + E +D+R V+L+SQEG+ F+++ +VAKMS LVKTMI +E  +++ +AQEIPLPNVK+ VLSKVIEFC+ Y  DPM EIEKPLKSANMH+VVQEWYAK+V+V QE LFELILAANYMDIKPLLDLTCATVASMIKGKT EEIRKTFNIVNDFTPEEEAQVREENKWCE+A
Sbjct:   77 ADEEKKPGEGEGGEENEEDDSRRVNLMSQEGDQFEVEVAVAKMSELVKTMIPEEADEDDDQAQEIPLPNVKSHVLSKVIEFCRQYVNDPMAEIEKPLKSANMHEVVQEWYAKYVDVDQELLFELILAANYMDIKPLLDLTCATVASMIKGKTPEEIRKTFNIVNDFTPEEEAQVREENKWCEEA 260

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BLAST of mRNA_H-paniculata_contig3777.9916.1 vs. uniprot
Match: A0A4D9D5I6_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D5I6_9STRA)

HSP 1 Score: 258 bits (659), Expect = 1.180e-84
Identity = 127/159 (79.87%), Postives = 142/159 (89.31%), Query Frame = 0

Query:   75 VHLVSQEGESFDIKASVAKMSNLVKTMITDEDGDEEGEAQEIPLPNVKASVLSKVIEFCKHYKEDPMNEIEKPLKSANMHDVVQEWYAKFVEVQQETLFELILAANYMDIKPLLDLTCATVASMIKGKTAEEIRKTFNIVNDFTPEEEAQVREENKWCE 233
            VHLVSQEG+ ++++ SV KMS LVKTM+ D+D  +  E QEIPLPNVK +VL+KVIEFCKH+KEDPMN+IEKPLKSANMH+VVQ+WYA FV V QE LFELILAANYMDIKPLLDLTCATVASMIKGKT EEIR+TFNI NDFTPEEEAQVREENKWCE
Sbjct:   14 VHLVSQEGDQYEVEVSVCKMSELVKTMLPDDD--DSSETQEIPLPNVKNNVLAKVIEFCKHHKEDPMNDIEKPLKSANMHEVVQDWYANFVNVDQELLFELILAANYMDIKPLLDLTCATVASMIKGKTPEEIRRTFNITNDFTPEEEAQVREENKWCE 170

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BLAST of mRNA_H-paniculata_contig3777.9916.1 vs. uniprot
Match: A0A7S2DNG6_9STRA (Hypothetical protein n=2 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2DNG6_9STRA)

HSP 1 Score: 259 bits (661), Expect = 2.050e-84
Identity = 134/184 (72.83%), Postives = 157/184 (85.33%), Query Frame = 0

Query:   53 ALEEKSQATDAAGADESEDTRSVHLVSQEGESFDIKASVAKMSNLVKTMITDEDGDEEGE-AQEIPLPNVKASVLSKVIEFCKHYKEDPMNEIEKPLKSANMHDVVQEWYAKFVEVQQETLFELILAANYMDIKPLLDLTCATVASMIKGKTAEEIRKTFNIVNDFTPEEEAQVREENKWCEDA 235
            ++++K   T+   A++  D + V LVSQEG++F ++  VAKMS LVKTMI +   DEEGE  QEIPLPNVK+++L KVIEFCKH+  +PM+EIEKPLKS+NMH+VVQEWYA +VEV QETLFELILAANYMDIKPLLDLTCATVASMIKGKT EEIRKTFNIVNDFTPEEEAQVREENKWCE+A
Sbjct:   34 SVDDKDNMTEVEDAED--DGKHVDLVSQEGDNFQVEKKVAKMSELVKTMIPE---DEEGEDQQEIPLPNVKSAILGKVIEFCKHHANEPMSEIEKPLKSSNMHEVVQEWYANYVEVDQETLFELILAANYMDIKPLLDLTCATVASMIKGKTPEEIRKTFNIVNDFTPEEEAQVREENKWCEEA 212

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BLAST of mRNA_H-paniculata_contig3777.9916.1 vs. uniprot
Match: F0XYF9_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0XYF9_AURAN)

HSP 1 Score: 255 bits (652), Expect = 7.460e-84
Identity = 128/158 (81.01%), Postives = 143/158 (90.51%), Query Frame = 0

Query:   78 VSQEGESFDIKASVAKMSNLVKTMITDEDGDEEGEAQEIPLPNVKASVLSKVIEFCKHYKEDPMNEIEKPLKSANMHDVVQEWYAKFVEVQQETLFELILAANYMDIKPLLDLTCATVASMIKGKTAEEIRKTFNIVNDFTPEEEAQVREENKWCEDA 235
            +SQEG+ F+++  VAKMS LVKTMI +E  DEE EAQEIPLPNVK+ VL+KVIEFC+ Y E+PM+EIEKPLKSANMH+VVQEWYA +V+V QE LFELILAANYMDIKPLLDLTCATVASMIKGKT EEIRKTFNIVNDFTPEEEAQVREENKWCE+A
Sbjct:    1 MSQEGDQFEVEVKVAKMSELVKTMIPEE-ADEEEEAQEIPLPNVKSHVLAKVIEFCRRYAEEPMSEIEKPLKSANMHEVVQEWYANYVDVDQELLFELILAANYMDIKPLLDLTCATVASMIKGKTPEEIRKTFNIVNDFTPEEEAQVREENKWCEEA 157

The following BLAST results are available for this feature:

BLAST of mRNA_H-paniculata_contig3777.9916.1 vs. uniprot

BLAST of mRNA_H-paniculata_contig3777.9916.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D7G1U6_ECTSI	5.400e-113	94.05	Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2...	[more]
A0A835Z9K0_9STRA	4.430e-92	80.92	Skp1 family, dimerization domain-containing protei...	[more]
A0A836CN28_9STRA	1.760e-90	79.77	Skp1 family, dimerization domain-containing protei...	[more]
A0A7S2SQM9_9STRA	1.010e-89	77.30	Hypothetical protein n=1 Tax=Rhizochromulina marin...	[more]
A0A7S3HQT9_9STRA	1.710e-87	80.95	Hypothetical protein n=1 Tax=Spumella elongata Tax...	[more]
A0A7S2BM50_9STRA	1.150e-86	73.51	Hypothetical protein n=1 Tax=Florenciella parvula ...	[more]
A0A7S3JW81_9STRA	3.760e-86	73.91	Hypothetical protein n=3 Tax=Pelagomonadales TaxID...	[more]
A0A4D9D5I6_9STRA	1.180e-84	79.87	Uncharacterized protein n=1 Tax=Nannochloropsis sa...	[more]
A0A7S2DNG6_9STRA	2.050e-84	72.83	Hypothetical protein n=2 Tax=Dictyocha speculum Ta...	[more]
F0XYF9_AURAN	7.460e-84	81.01	Uncharacterized protein n=1 Tax=Aureococcus anopha...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001232	S-phase kinase-associated protein 1-like	SMART	SM00512	skp1_3	coord: 72..184 e-value: 6.8E-28 score: 108.7
IPR016072	SKP1 component, dimerisation	PFAM	PF01466	Skp1	coord: 185..232 e-value: 1.1E-27 score: 95.8
None	No IPR available	GENE3D	3.30.710.10		coord: 68..235 e-value: 4.2E-66 score: 224.0
None	No IPR available	PANTHER	PTHR11165	SKP1	coord: 74..234
None	No IPR available	PANTHER	PTHR11165:SF120	S-PHASE KINASE-ASSOCIATED PROTEIN 1	coord: 74..234
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_C_REGION	Signal peptide C-region	coord: 28..31
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE	Signal Peptide	coord: 1..31
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 32..235
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_N_REGION	Signal peptide N-region	coord: 1..15
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_H_REGION	Signal peptide H-region	coord: 16..27
IPR016073	SKP1 component, POZ domain	PFAM	PF03931	Skp1_POZ	coord: 74..137 e-value: 3.1E-18 score: 65.7
IPR011333	SKP1/BTB/POZ domain superfamily	SUPERFAMILY	54695	POZ domain	coord: 74..140
IPR036296	SKP1-like, dimerisation domain superfamily	SUPERFAMILY	81382	Skp1 dimerisation domain-like	coord: 158..232

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-paniculata_contig3777	contig	H-paniculata_contig3777:7822..11617 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-paniculata_contig3777.9916.1	mRNA_H-paniculata_contig3777.9916.1	Halopteris paniculata Hal_grac_a_UBK monoicous	mRNA	H-paniculata_contig3777 5382..16045 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-paniculata_contig3777.9916.1 ID=prot_H-paniculata_contig3777.9916.1|Name=mRNA_H-paniculata_contig3777.9916.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=236bp
MRNEKFDLFFVPSPRACCSSSGSFLLFSASLSPHPPTPNTPLHSSKHWKN
MSALEEKSQATDAAGADESEDTRSVHLVSQEGESFDIKASVAKMSNLVKT
MITDEDGDEEGEAQEIPLPNVKASVLSKVIEFCKHYKEDPMNEIEKPLKS
ANMHDVVQEWYAKFVEVQQETLFELILAANYMDIKPLLDLTCATVASMIK
GKTAEEIRKTFNIVNDFTPEEEAQVREENKWCEDA*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR001232	SKP1-like
IPR016072	Skp1_comp_dimer
IPR016073	Skp1_comp_POZ
IPR011333	SKP1/BTB/POZ_sf
IPR036296	SKP1-like_dim_sf