prot_H-paniculata_contig3769.9900.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig3769.9900.1
Unique Nameprot_H-paniculata_contig3769.9900.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length242
Homology
BLAST of mRNA_H-paniculata_contig3769.9900.1 vs. uniprot
Match: A0A6H5L770_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L770_9PHAE)

HSP 1 Score: 203 bits (517), Expect = 1.930e-62
Identity = 103/197 (52.28%), Postives = 126/197 (63.96%), Query Frame = 0
Query:   63 VGVAPSNHIYGPASVHLLPCKIHHNGPAPVATYFRPADSRHKGS-------------VEQLGKTDAGGNQERECCDGSTEQEQVK----GALGILGADRRKDGQVWEHFEDDGEEHTARFRGRKLVGRKMVLPDGVYGVVLREKPWPEGVREENEELSSFWAAETSFRDVTVWGHDEIRQESTVDRCLAWMEVANSV 242
            VG+  + H+YGPASVHLLPCKIHH GPAPVATYFRP+ ++   +              ++ G    G    R+        E  K            +     Q WE FEDD  EHTARFRGRK VGRK+ LP GV+GVVLREKP P GVRE NE+++S+WAAETSFR+VTVWGHD+ R+ESTVDR LAW+EV+ S+
Sbjct:   16 VGIGAARHVYGPASVHLLPCKIHHTGPAPVATYFRPSPAKENRNSDTTAAAPTATALADETGNNGVGDGAARKTSTAPGSGENAKLVAXXXXXXXXGESAVGDQKWELFEDDSAEHTARFRGRKFVGRKVELPKGVHGVVLREKPCPPGVRENNEDVASYWAAETSFREVTVWGHDQPRRESTVDRSLAWLEVSKSI 212          
BLAST of mRNA_H-paniculata_contig3769.9900.1 vs. uniprot
Match: D8LTC6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LTC6_ECTSI)

HSP 1 Score: 154 bits (390), Expect = 1.940e-43
Identity = 70/94 (74.47%), Postives = 81/94 (86.17%), Query Frame = 0
Query:  149 QVWEHFEDDGEEHTARFRGRKLVGRKMVLPDGVYGVVLREKPWPEGVREENEELSSFWAAETSFRDVTVWGHDEIRQESTVDRCLAWMEVANSV 242
            Q WE FEDD  EHTARFRGRK VGRK+ LP GV+GVVLREKP P GVRE NE+++S+WAAETSFR+VTVWGHD+ RQESTVDR LAW+EV+ S+
Sbjct:  107 QKWELFEDDSAEHTARFRGRKFVGRKVELPKGVHGVVLREKPCPPGVRENNEDVASYWAAETSFREVTVWGHDQPRQESTVDRSLAWLEVSKSI 200          
BLAST of mRNA_H-paniculata_contig3769.9900.1 vs. uniprot
Match: A0A7S2V5X7_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V5X7_9STRA)

HSP 1 Score: 73.2 bits (178), Expect = 1.040e-12
Identity = 32/80 (40.00%), Postives = 50/80 (62.50%), Query Frame = 0
Query:  165 FRGRKLVGRKMVLPDGVYGVVLREKPWPEGVREENEELSSFWAAETSFRDVTVWGHDEI--RQESTVDRCLAWMEVANSV 242
            FRGRKL+GR ++LP  V GVV +E   PE  ++  E+   +W  + SF ++ VWGHD++   ++  VD+ L WM +A  +
Sbjct:   60 FRGRKLMGRDVILPPQVRGVVFQEGINPEAKQDGEEDRDQYWGVQASFDEMRVWGHDQVIGPEDCRVDQALEWMALAQQI 139          
BLAST of mRNA_H-paniculata_contig3769.9900.1 vs. uniprot
Match: A0A1E3QC38_LIPST (Uncharacterized protein n=1 Tax=Lipomyces starkeyi NRRL Y-11557 TaxID=675824 RepID=A0A1E3QC38_LIPST)

HSP 1 Score: 73.6 bits (179), Expect = 3.620e-12
Identity = 55/169 (32.54%), Postives = 74/169 (43.79%), Query Frame = 0
Query:   78 HLLPCKIHHNGPAPVATYF-----RPADSRHKGSVEQLGKTDAGGNQERECC--DGSTEQEQVKGALGILGADRRKDGQVWEHFEDDGEEHTARFRGRKLVGRKMVLPDGVYGVVLREKPWPEGVREENE----------------ELSSFWAAETSFRDVTVWGHDEI 223
            H+LPCKIHH+GPA V  YF     +   SR K S   +  T        +    D S E+ +VK      G  R K+     H       H A FRGRKLVG+K+VLP+G  G +L   P P  +  + +                E    W +E  F ++ VW HD +
Sbjct:   27 HILPCKIHHDGPANVRRYFQVHPYKSDASRPKVSSATICPTSITTESSTDITSTDLSAEETEVKD----YGMSRPKESTPSPHSV-----HEAYFRGRKLVGQKLVLPEGYKGFILPIAPSPSDILPQTKSYFYSEDDXXXXXXXXEQEHMWKSEAEFNELFVWNHDVV 186          
BLAST of mRNA_H-paniculata_contig3769.9900.1 vs. uniprot
Match: A0A507CFV3_9FUNG (Uncharacterized protein n=1 Tax=Synchytrium microbalum TaxID=1806994 RepID=A0A507CFV3_9FUNG)

HSP 1 Score: 68.2 bits (165), Expect = 1.840e-9
Identity = 50/166 (30.12%), Postives = 75/166 (45.18%), Query Frame = 0
Query:   77 VHLLPCKIHHNGPAPVATYFRPADSRHKGSVEQLGKTDAGGNQERECCDGSTEQEQVKGALGILGADRRKDGQVWEHFEDDGEEHTARFRGRKLVGRKMVLPDGVYGVVLREKPWPEGVREENEELSSFWAAETSFRDVTVWGHDEIRQESTVDRC--LAWMEVAN 240
            +HLLPC+I HNG A V +YF           E+L +TD+  +                     L A R +D  ++E          + FRGRKL GR++ +PD   GV+ +E+     +     + S  W A +SF  + VW HD++   S+      L W E+AN
Sbjct:   20 LHLLPCRIDHNGTAKVDSYFIITPP------EKLTRTDSAID---------------------LEAPRVEDETIYE----------SAFRGRKLRGRRLYVPDEYQGVMFQEQESTTDL-----DASRVWMASSSFESMMVWNHDDVPSASSEGAMMSLCWAEIAN 143          
BLAST of mRNA_H-paniculata_contig3769.9900.1 vs. uniprot
Match: A0A2G5D2P6_AQUCA (Uncharacterized protein n=2 Tax=Thalictroideae TaxID=1463137 RepID=A0A2G5D2P6_AQUCA)

HSP 1 Score: 64.7 bits (156), Expect = 2.750e-9
Identity = 36/86 (41.86%), Postives = 47/86 (54.65%), Query Frame = 0
Query:  163 ARFRGRKLVGRKMVLPDGVYGVVLREKPWP-----EGVREENEELSSFWAAETSFRDVTVWGHDEIRQESTVD-RCLAWMEVANSV 242
            A FRGRKL G K+ LP G  G VL +K        EGV EEN   S+ W    SF+ +  W HD++  +S    RCL W+  AN++
Sbjct:   70 ACFRGRKLQGTKITLPQGYSGFVLGKKKIAGKRKSEGVSEEN---SNHWEMRASFQSIDYWNHDDVPSQSDAFYRCLHWLPAANAL 152          
BLAST of mRNA_H-paniculata_contig3769.9900.1 vs. uniprot
Match: A0A835G368_9POAL (Uncharacterized protein n=1 Tax=Digitaria exilis TaxID=1010633 RepID=A0A835G368_9POAL)

HSP 1 Score: 64.3 bits (155), Expect = 3.270e-9
Identity = 32/81 (39.51%), Postives = 45/81 (55.56%), Query Frame = 0
Query:  163 ARFRGRKLVGRKMVLPDGVYGVVLREKPWPEGVREENEELSSFWAAETSFRDVTVWGHDEIRQ-ESTVDRCLAWMEVANSV 242
            A FRGRKL G  + LPDG  G VL +K   +  +  + E SSF  +   F+ +T W HD     E ++ RC  W+ VAN++
Sbjct:   66 AFFRGRKLQGATLALPDGYRGYVLEKKSGEKDTQNSDGEFSSF-VSRAEFQSITYWNHDVTPSAEDSIPRCFHWLTVANAM 145          
BLAST of mRNA_H-paniculata_contig3769.9900.1 vs. uniprot
Match: A0A6J1KH29_CUCMA (uncharacterized protein C12B10.15c n=3 Tax=Cucurbita TaxID=3660 RepID=A0A6J1KH29_CUCMA)

HSP 1 Score: 63.5 bits (153), Expect = 6.380e-9
Identity = 30/82 (36.59%), Postives = 43/82 (52.44%), Query Frame = 0
Query:  162 TARFRGRKLVGRKMVLPDGVYGVVLREKPWPEGVREENEELSSFWAAETSFRDVTVWGHDEI-RQESTVDRCLAWMEVANSV 242
             A FRGRKL G  + LP+G YG V+  K   +    E  + SS W  +  F ++T W HD +  Q+ T  R   W+ VA ++
Sbjct:   65 NAYFRGRKLQGATISLPEGYYGYVIGRKSLRKRKASEESQDSSSWQVKAKFENITYWNHDTLPTQDDTFQRSFHWLTVAQAL 146          
BLAST of mRNA_H-paniculata_contig3769.9900.1 vs. uniprot
Match: S8BAC9_DACHA (Uncharacterized protein n=1 Tax=Dactylellina haptotyla (strain CBS 200.50) TaxID=1284197 RepID=S8BAC9_DACHA)

HSP 1 Score: 62.8 bits (151), Expect = 1.110e-8
Identity = 36/97 (37.11%), Postives = 52/97 (53.61%), Query Frame = 0
Query:  158 GEEHTARFRGRKLVGRKMVLPDGVYGVVL-------------REKPWPEGVREENEEL--SSFWAAETSFRDVTVWGHD---EIRQESTVDRCLAWM 236
            GE HT+ FRGRKLVG K+V+PDG  G VL             RE  + +   +E +E+  ++ W  E+SF ++ VWGH+   +  Q+  V     WM
Sbjct:   53 GETHTSYFRGRKLVGTKLVVPDGYQGRVLNPPSNEPLTGNQKREVLYQDDEDDEGDEIEEAAQWTTESSFSEIMVWGHELAVDGSQDGVVKGLEEWM 149          
BLAST of mRNA_H-paniculata_contig3769.9900.1 vs. uniprot
Match: A0A5J9VD07_9POAL (Uncharacterized protein (Fragment) n=1 Tax=Eragrostis curvula TaxID=38414 RepID=A0A5J9VD07_9POAL)

HSP 1 Score: 63.2 bits (152), Expect = 1.240e-8
Identity = 32/81 (39.51%), Postives = 47/81 (58.02%), Query Frame = 0
Query:  163 ARFRGRKLVGRKMVLPDGVYGVVLREKPWPEGVREENEELSSFWAAETSFRDVTVWGHDEIRQ-ESTVDRCLAWMEVANSV 242
            A FRGRKL G  + LPDG  G VL +K   +  +  ++E+S+F  +   F++VT W HD     E  + RC  W+ VAN++
Sbjct:   86 AFFRGRKLQGATLALPDGYRGYVLEKKNGGKDKQNSDDEVSNF-VSRAEFQNVTYWNHDTTPSAEDPLPRCFHWLTVANAM 165          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig3769.9900.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L770_9PHAE1.930e-6252.28Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LTC6_ECTSI1.940e-4374.47Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7S2V5X7_9STRA1.040e-1240.00Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A1E3QC38_LIPST3.620e-1232.54Uncharacterized protein n=1 Tax=Lipomyces starkeyi... [more]
A0A507CFV3_9FUNG1.840e-930.12Uncharacterized protein n=1 Tax=Synchytrium microb... [more]
A0A2G5D2P6_AQUCA2.750e-941.86Uncharacterized protein n=2 Tax=Thalictroideae Tax... [more]
A0A835G368_9POAL3.270e-939.51Uncharacterized protein n=1 Tax=Digitaria exilis T... [more]
A0A6J1KH29_CUCMA6.380e-936.59uncharacterized protein C12B10.15c n=3 Tax=Cucurbi... [more]
S8BAC9_DACHA1.110e-837.11Uncharacterized protein n=1 Tax=Dactylellina hapto... [more]
A0A5J9VD07_9POAL1.240e-839.51Uncharacterized protein (Fragment) n=1 Tax=Eragros... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.30.200.130coord: 67..112
e-value: 1.7E-8
score: 35.9
coord: 145..242
e-value: 1.4E-14
score: 55.7
NoneNo IPR availablePANTHERPTHR47204FAMILY NOT NAMEDcoord: 75..242
IPR013924Ribonuclease H2, subunit CPFAMPF08615RNase_H2_suCcoord: 77..241
e-value: 9.6E-18
score: 64.7

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig3769contigH-paniculata_contig3769:5728..11763 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig3769.9900.1mRNA_H-paniculata_contig3769.9900.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig3769 5728..11763 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig3769.9900.1 ID=prot_H-paniculata_contig3769.9900.1|Name=mRNA_H-paniculata_contig3769.9900.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=242bp
MQSPQVIAAPQQLHSISLVGQLIPREEGEPLANLFYDILLKKMESQGESG
GSGGHAGGVVGGVGVAPSNHIYGPASVHLLPCKIHHNGPAPVATYFRPAD
SRHKGSVEQLGKTDAGGNQERECCDGSTEQEQVKGALGILGADRRKDGQV
WEHFEDDGEEHTARFRGRKLVGRKMVLPDGVYGVVLREKPWPEGVREENE
ELSSFWAAETSFRDVTVWGHDEIRQESTVDRCLAWMEVANSV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013924RNase_H2_suC