prot_H-paniculata_contig37651.9894.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig37651.9894.1
Unique Nameprot_H-paniculata_contig37651.9894.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length77
Homology
[Close]
BLAST of mRNA_H-paniculata_contig37651.9894.1 vs. uniprot
Match: A0A6H5JBA7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBA7_9PHAE)

HSP 1 Score: 89.4 bits (220), Expect = 4.770e-19
Identity = 43/77 (55.84%), Postives = 55/77 (71.43%), Query Frame = 0 
Query:    1 NDFHCLYGHSNKFILRETAKFVSLEMTGKMKPCTGCSMAKGFRKPISSRTKTRSDGNLGRVSIDLGGPKSVPSLTGK 77
            N+FH +Y HS+K +LR TAK +  E+ G+M  CTGCSMAK  +K I+  TK+RSD  LGRV +DLGG K V S+ GK
Sbjct:  667 NEFHNIYAHSHKGLLRTTAKRLGTELVGEMHECTGCSMAKAVKKGIARETKSRSDKKLGRVFVDLGGRKDVASVGGK 743
[Close]
BLAST of mRNA_H-paniculata_contig37651.9894.1 vs. uniprot
Match: A0A6H5KZH7_9PHAE (Uncharacterized protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZH7_9PHAE)

HSP 1 Score: 89.4 bits (220), Expect = 4.780e-19
Identity = 43/77 (55.84%), Postives = 55/77 (71.43%), Query Frame = 0 
Query:    1 NDFHCLYGHSNKFILRETAKFVSLEMTGKMKPCTGCSMAKGFRKPISSRTKTRSDGNLGRVSIDLGGPKSVPSLTGK 77
            N+FH +Y HS+K +LR TAK +  E+ G+M  CTGCSMAK  +K I+  TK+RSD  LGRV +DLGG K V S+ GK
Sbjct:  374 NEFHNIYAHSHKGLLRTTAKRLGTELVGEMHECTGCSMAKAVKKGIARETKSRSDKKLGRVFVDLGGRKDVASVGGK 450
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig37651.9894.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JBA7_9PHAE4.770e-1955.84Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KZH7_9PHAE4.780e-1955.84Uncharacterized protein n=3 Tax=Ectocarpus sp. CCA... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig37651contigH-paniculata_contig37651:2..232 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig37651.9894.1mRNA_H-paniculata_contig37651.9894.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig37651 2..232 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig37651.9894.1 ID=prot_H-paniculata_contig37651.9894.1|Name=mRNA_H-paniculata_contig37651.9894.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=77bp
NDFHCLYGHSNKFILRETAKFVSLEMTGKMKPCTGCSMAKGFRKPISSRT
KTRSDGNLGRVSIDLGGPKSVPSLTGK
back to top