prot_H-paniculata_contig3721.9813.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig3721.9813.1
Unique Nameprot_H-paniculata_contig3721.9813.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length442
Homology
BLAST of mRNA_H-paniculata_contig3721.9813.1 vs. uniprot
Match: A0A6H5KEV5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KEV5_9PHAE)

HSP 1 Score: 227 bits (578), Expect = 8.400e-66
Identity = 158/363 (43.53%), Postives = 207/363 (57.02%), Query Frame = 0
Query:  108 MAVGSEVHMVARTELA----GNSN-----------EAAAAAEPSANPRSSPTVMSMFASLHRKLIVQQVLTAAKRAEMRARTEGSARLIKQAKRTNILVIDDKDEMLAAAEAIPIRQSQQPGLGQDSSAIGGEQRSDKKRPRPALPREGVEGSANSEDSLLP-------RDPLTAWLYDCYNHDDYHGHVTDIHKFLGGIDVSHVMFRYHIKSDGTLDPDRRRFCVKFKTRGGRDLAVKRSGEALGAADSW--SPERVPVIRGRD---ELEVDAISDHLLVLPQGSSVAEVIAKVTSRLPRDLKPAVTLCLSEREQAQQKNTANNRTSSHSSSDRARSRREA-LESHRRDLLRASLGATLAEA 442
            MA+GSEVH++ART+      GN++           +A A     A  +S    M++FASLHRKLIVQQVLT AKRAE++AR +   R  KQAK+  +  ++D++EMLAAAEAIP+   Q                                                  RDPLTAW+  CYN D Y GHV+D+ +F  GID  H+M RYH+  DGTLDPDRRRFCV+FKT+ GRDLA+KRSGEALG+  SW    + V VIRGRD   + +   I D L+VLPQG SVA+V+ KV +RLP+DL PA+    ++ +          R   H   +R +   E+ LE++RRD+LRA+LG  LAEA
Sbjct:    1 MAIGSEVHVLARTQQQQQQPGNASRHCGRRGEGGRQAGAGETVEAGDKSGNPGMTVFASLHRKLIVQQVLTEAKRAEIKARNDEIDRREKQAKK-KMARMEDQEEMLAAAEAIPVPVGQAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRRRDPLTAWVCGCYNDDGYAGHVSDLRQFFRGIDFHHLMLRYHVLPDGTLDPDRRRFCVRFKTKAGRDLAIKRSGEALGSYCSWWDPGDVVTVIRGRDVASDSDGGGIDDMLVVLPQGRSVADVLDKVEARLPKDLTPALAAQRTDDDATNNSKKRPRRHRKHDDGERPQQLPESQLEAYRRDMLRAALGCGLAEA 362          
BLAST of mRNA_H-paniculata_contig3721.9813.1 vs. uniprot
Match: D8LND1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LND1_ECTSI)

HSP 1 Score: 140 bits (353), Expect = 8.140e-36
Identity = 90/169 (53.25%), Postives = 117/169 (69.23%), Query Frame = 0
Query:   59 MTIRLTPELLTRLQR--PGPKPSIELILKNAAEGGPVLVVDGVKYNTNSHQMAVGSEVHMVARTELA-GNSN-----------EAAAAAEPSANPRSSPTVMSMFASLHRKLIVQQVLTAAKRAEMRARTEGSARLIKQAKRTNILVIDDKDEMLAAAEAIPIRQSQQP 213
            MTIRLTPE+L RL    PGPKP IEL+LK+A EGGPVL+V GV +  ++HQMA+GSEVH++ART+   GN +           +A A     A  +S    M++FASLHRKLIVQQVLT AKRAE++AR +   R  KQAK+  ++ ++D++EMLAAAEAIP+   Q P
Sbjct:    1 MTIRLTPEVLGRLMMNGPGPKPEIELVLKSAGEGGPVLLVGGVSHKLDAHQMAIGSEVHVLARTQQQPGNGSRHCGHRGEGGRQAGAGEMVEAGGKSGNPGMTVFASLHRKLIVQQVLTEAKRAEIKARNDEIDRREKQAKK-KMVRMEDQEEMLAAAEAIPVPVGQAP 168          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig3721.9813.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KEV5_9PHAE8.400e-6643.53Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LND1_ECTSI8.140e-3653.25Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig3721contigH-paniculata_contig3721:2681..7783 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig3721.9813.1mRNA_H-paniculata_contig3721.9813.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig3721 2681..7902 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig3721.9813.1 ID=prot_H-paniculata_contig3721.9813.1|Name=mRNA_H-paniculata_contig3721.9813.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=442bp
MNSAGKAAATRRRSLPPANGSTSTQPIPACFGPRAPDVTVTPRREPGSDV
KVLKPHTGMTIRLTPELLTRLQRPGPKPSIELILKNAAEGGPVLVVDGVK
YNTNSHQMAVGSEVHMVARTELAGNSNEAAAAAEPSANPRSSPTVMSMFA
SLHRKLIVQQVLTAAKRAEMRARTEGSARLIKQAKRTNILVIDDKDEMLA
AAEAIPIRQSQQPGLGQDSSAIGGEQRSDKKRPRPALPREGVEGSANSED
SLLPRDPLTAWLYDCYNHDDYHGHVTDIHKFLGGIDVSHVMFRYHIKSDG
TLDPDRRRFCVKFKTRGGRDLAVKRSGEALGAADSWSPERVPVIRGRDEL
EVDAISDHLLVLPQGSSVAEVIAKVTSRLPRDLKPAVTLCLSEREQAQQK
NTANNRTSSHSSSDRARSRREALESHRRDLLRASLGATLAEA
back to top