mRNA_H-paniculata_contig11504.972.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
Overview
Homology
BLAST of mRNA_H-paniculata_contig11504.972.1 vs. uniprot
Match: D7G234_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G234_ECTSI) HSP 1 Score: 200 bits (509), Expect = 2.880e-59 Identity = 105/154 (68.18%), Postives = 127/154 (82.47%), Query Frame = 1 Query: 1 QSKSMQYIGVSRGVQQSLRLHLGRCPVETHFIKVQHITRPSRSLLEIMKESWIAENGSVPKGNDGGEMQAVWENPLNVIPLFTEEDKANVAEMKEKGKEDRGIKAVARRFEAAKVEIMEKRGVKESMRFDPKLKGKGLLDFHMVKAQPNTSVPK 462 +SK+++YIGVSRG+QQSLRL L R P +T++ KVQ+ITRPSRSLLEI+KESWI ENGS P GN QAVWE+ +NV+PLFTEED A VAE KEKGKEDRG+K +A RFE +EI+E+RGVKES+RFDPKLKG+GLLD M K P++SVPK Sbjct: 141 ESKTLRYIGVSRGIQQSLRLSLARRPKDTYYFKVQNITRPSRSLLEIIKESWIEENGSTPDGNADEASQAVWEHAINVVPLFTEEDLAVVAEWKEKGKEDRGLKKIAGRFENEILEILEERGVKESIRFDPKLKGRGLLDVKMPK--PDSSVPK 292
BLAST of mRNA_H-paniculata_contig11504.972.1 vs. uniprot
Match: A0A836CJ14_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJ14_9STRA) HSP 1 Score: 199 bits (506), Expect = 5.380e-59 Identity = 102/150 (68.00%), Postives = 119/150 (79.33%), Query Frame = 1 Query: 10 SMQYIGVSRGVQQSLRLHLGRCPVETHFIKVQHITRPSRSLLEIMKESWIAENGSVPKGNDGGEMQAVWENPLNVIPLFTEEDKANVAEMKEKGKEDRGIKAVARRFEAAKVEIMEKRGVKESMRFDPKLKGKGLLDFHMVKAQPNTSVP 459 ++QYIGVSR VQQSLRLHL RCP TH ++VQHIT PSRSLLE++K+ W AENG P GNDGG QA WE P++V PL TEEDK + +EKG+ED IKA+ARRFEAAKVEIME RGVKE+MRFDPKLKG+GLLD + P+TSVP Sbjct: 125 ALQYIGVSRSVQQSLRLHLARCPELTHSVRVQHITTPSRSLLEVIKDEWCAENGGAPPGNDGGAEQARWEMPMDVKPLMTEEDKEKLMTAREKGREDSAIKAIARRFEAAKVEIMEARGVKENMRFDPKLKGQGLLDLW--QPGPDTSVP 272
BLAST of mRNA_H-paniculata_contig11504.972.1 vs. uniprot
Match: A0A7S2WPP4_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WPP4_9STRA) HSP 1 Score: 152 bits (383), Expect = 1.740e-40 Identity = 77/148 (52.03%), Postives = 102/148 (68.92%), Query Frame = 1 Query: 13 MQYIGVSRGVQQSLRLHLGRCPVETHFIKVQHITRPSRSLLEIMKESWIAENGSVPKGNDGGEMQAVWENPLNVIPLFTEEDKANVAEMKEKGKEDRGIKAVARRFEAAKVEIMEKRGVKESMRFDPKLKGKGLLDFHMVKAQPNTSV 456 ++++G+SR + QSLRLHLGR P +F K H+ PSR LLE ++E+WIAENG P GNDG + WE P +V L TEED+ + E ++ G+ED IK VARRFE KV++++ RGV E++RFDPKLKGKGLLD K TS+ Sbjct: 141 LRFVGISRDISQSLRLHLGRQPELCYFYKAMHMQSPSRMLLESVRENWIAENGVCPDGNDGEGALSTWEKPTDVNGLMTEEDRNAIDEARQIGREDGAIKKVARRFETQKVDVLKARGVTENLRFDPKLKGKGLLDLISEKKSAQTSM 288
BLAST of mRNA_H-paniculata_contig11504.972.1 vs. uniprot
Match: A0A4D9CSA1_9STRA (Uncharacterized protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CSA1_9STRA) HSP 1 Score: 149 bits (375), Expect = 2.460e-39 Identity = 78/155 (50.32%), Postives = 113/155 (72.90%), Query Frame = 1 Query: 1 QSKSMQYIGVSRGVQQSLRLHLGRCPVETHFIKVQHITRPSRSLLEIMKESWIAENGSVPKGNDGGEMQAVWENPLNVIPLFTEEDKA--NVAEMKEKGKEDRGIKAVARRFEAAKVEIMEKRGVKESMRFDPKLKGKGLLDFHMVKAQPNTSVP 459 +S++++YIGVSR V QSLRLHL R P +T+ +V HI++P+R LLEI +++W+ + G P+GND G Q +WE+ L+V PL E D A A +K++ +E+ +K V RRFE AK+ ++ RGV ES+RFDPKLKGKGLLD ++ K QP+++VP Sbjct: 127 ESETVRYIGVSRSVAQSLRLHLARMPEQTYGFRVYHISKPTRVLLEITRDTWVDQLGYQPQGNDNGPNQQLWESALDVKPLMNEADHAALETARIKQRSEEN-AMKKVTRRFEEAKISVLNARGVTESLRFDPKLKGKGLLDLYLEK-QPDSAVP 279
BLAST of mRNA_H-paniculata_contig11504.972.1 vs. uniprot
Match: A0A388KW50_CHABU (Uncharacterized protein n=1 Tax=Chara braunii TaxID=69332 RepID=A0A388KW50_CHABU) HSP 1 Score: 151 bits (381), Expect = 3.090e-39 Identity = 77/153 (50.33%), Postives = 106/153 (69.28%), Query Frame = 1 Query: 1 QSKSMQYIGVSRGVQQSLRLHLGRCPVETHFIKVQHITRPSRSLLEIMKESWIAENGSVPKGNDGGEMQAVWENPLNVIPLFTEEDKANVAEMKEKGKEDRGIKAVARRFEAAKVEIMEKRGVKESMRFDPKLKGKGLLDFHMVKAQPNTSVP 459 + K++QY+G+SR V QS+RLH R P + HF+KV HI PSR++LE ++ +WI EN + P GNDGGE+Q +WEN L+ PL T+E+K + + +E K R +K VARR E+ VE + R V E++RFDPKLK KGLLD + P+TSVP Sbjct: 226 EDKTLQYVGMSRQVYQSMRLHFARMPSKCHFVKVVHIASPSRAVLESIQTAWITENDTRPPGNDGGEIQHLWENALDCKPLMTDEEKELIEKTEEGPKRARTLKNVARRIESQLVEQFKLRNVSETLRFDPKLKEKGLLDLKSTQYVPDTSVP 378
BLAST of mRNA_H-paniculata_contig11504.972.1 vs. uniprot
Match: A0A0G4GGJ4_VITBC (Uncharacterized protein n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4GGJ4_VITBC) HSP 1 Score: 144 bits (363), Expect = 4.300e-38 Identity = 75/153 (49.02%), Postives = 108/153 (70.59%), Query Frame = 1 Query: 1 QSKSMQYIGVSRGVQQSLRLHLGRCPVETHFIKVQHITRPSRSLLEIMKESWIAENGSVPKGNDGGEMQAVWENPLNVIPLFTEEDKANVAEMKEKGKEDRGIKAVARRFEAAKVEIMEKRGVKESMRFDPKLKGKGLLDFHMVKAQPNTSVP 459 + K++Q++GV+R ++QSL LHL R P TH++KV HI RP+RSLLE++K+SW+ E+G++P GN + Q +WE+PL++ PL T+ED+ AE ++KGK VARR+EA K E++E R V E +RFDPKLK +GL D + K P VP Sbjct: 80 EGKTLQHVGVTRSIRQSLLLHLARMPQLTHYVKVHHILRPNRSLLELIKQSWLDESGNIPPGNRPPD-QELWEHPLDIKPLMTDEDRERYAEKEQKGKGFNVYLEVARRYEAEKKEVLEARHVTEEVRFDPKLKRQGLSDLLIPK--PKDEVP 229
BLAST of mRNA_H-paniculata_contig11504.972.1 vs. uniprot
Match: K8YTT3_NANGC (Protein atypical group n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=K8YTT3_NANGC) HSP 1 Score: 149 bits (375), Expect = 1.100e-37 Identity = 78/155 (50.32%), Postives = 113/155 (72.90%), Query Frame = 1 Query: 1 QSKSMQYIGVSRGVQQSLRLHLGRCPVETHFIKVQHITRPSRSLLEIMKESWIAENGSVPKGNDGGEMQAVWENPLNVIPLFTEEDKA--NVAEMKEKGKEDRGIKAVARRFEAAKVEIMEKRGVKESMRFDPKLKGKGLLDFHMVKAQPNTSVP 459 +S++++YIGVSR V QSLRLHL R P +T+ +V HI++P+R LLEI +++W+ + G P+GND G Q +WE+ L+V PL E D A A +K++ +E+ +K V RRFE AK+ ++ RGV ES+RFDPKLKGKGLLD ++ K QP+++VP Sbjct: 127 ESETVRYIGVSRSVTQSLRLHLARMPEQTYGFRVYHISKPTRVLLEITRDTWVDQLGYQPQGNDNGPNQQLWESALDVKPLMNEADHAALETARIKQRSEEN-AMKKVTRRFEEAKISVLNARGVTESLRFDPKLKGKGLLDLYLEK-QPDSAVP 279
BLAST of mRNA_H-paniculata_contig11504.972.1 vs. uniprot
Match: A0A7S0MTT5_9CHLO (Hypothetical protein n=1 Tax=Pyramimonas obovata TaxID=1411642 RepID=A0A7S0MTT5_9CHLO) HSP 1 Score: 137 bits (345), Expect = 9.140e-35 Identity = 65/145 (44.83%), Postives = 100/145 (68.97%), Query Frame = 1 Query: 10 SMQYIGVSRGVQQSLRLHLGRCPVETHFIKVQHITRPSRSLLEIMKESWIAENGSVPKGNDGGEMQAVWENPLNVIPLFTEEDKANVAEMKEKGKEDRGIKAVARRFEAAKVEIMEKRGVKESMRFDPKLKGKGLLDFHMVKAQP 444 ++QY+G+SR + SLRLHL R P + H++KV H+ P+R++L+ ++++W+AENG GNDGGE+Q +WEN L+ +T E++ ++E+ E ++ + +K +ARRFEA +E RG+KE RFDPKLK GLLD + A P Sbjct: 149 ALQYVGMSRSINPSLRLHLARMPAKCHYVKVAHVASPNRAVLQQVQDNWVAENGGPVPGNDGGELQNLWENALDCKTRWTAEEEKEISELPEGPQKKKALKVLARRFEADIKAELEGRGIKEQFRFDPKLKDLGLLDLKNMDAAP 293
BLAST of mRNA_H-paniculata_contig11504.972.1 vs. uniprot
Match: A0A2K1K7G9_PHYPA (Uncharacterized protein n=2 Tax=Physcomitrium patens TaxID=3218 RepID=A0A2K1K7G9_PHYPA) HSP 1 Score: 135 bits (340), Expect = 1.550e-34 Identity = 69/153 (45.10%), Postives = 104/153 (67.97%), Query Frame = 1 Query: 1 QSKSMQYIGVSRGVQQSLRLHLGRCPVETHFIKVQHITRPSRSLLEIMKESWIAENGSVPKGNDGGEMQAVWENPLNVIPLFTEEDKANVAEMKEKGKEDRGIKAVARRFEAAKVEIMEKRGVKESMRFDPKLKGKGLLDFHMVKAQPNTSVP 459 ++K++ +IG+SR V QS+RLH R P++ +++KV H+++PSR+LLE +++WI+ENGSVP GND GE+Q +WEN L+ P T+E+K E + + +K VARR E I ++R + +RFDPKLK + LLD V +P+TSVP Sbjct: 97 ENKTLCFIGISRQVYQSMRLHFARRPLQCYYVKVMHVSKPSRALLEGTRDAWISENGSVPVGNDNGEIQNLWENALDCTPFMTDEEKLLHEEAAPGPPKAKVLKNVARRIEKDLEGIFKQRNCTDVLRFDPKLKDRCLLDLKGVAVKPDTSVP 249
BLAST of mRNA_H-paniculata_contig11504.972.1 vs. uniprot
Match: A0A176W0C8_MARPO (Uncharacterized protein n=2 Tax=Marchantia polymorpha TaxID=3197 RepID=A0A176W0C8_MARPO) HSP 1 Score: 135 bits (341), Expect = 7.400e-34 Identity = 70/152 (46.05%), Postives = 101/152 (66.45%), Query Frame = 1 Query: 4 SKSMQYIGVSRGVQQSLRLHLGRCPVETHFIKVQHITRPSRSLLEIMKESWIAENGSVPKGNDGGEMQAVWENPLNVIPLFTEEDKANVAEMKEKGKEDRGIKAVARRFEAAKVEIMEKRGVKESMRFDPKLKGKGLLDFHMVKAQPNTSVP 459 +K++QY+GV+R V QS+RLH R P + ++KVQH++RPSR+LLE +++ WIA+NGS P GND GEMQ WENPL+ T+E+ + E + +K VARR E + E+R + +RF+PKLK +GLLD V +P++SVP Sbjct: 172 AKTLQYVGVTRQVYQSMRLHFARFPSKCFYVKVQHLSRPSRALLEGIRDQWIADNGSPPPGNDNGEMQNRWENPLDCKVFMTDEEMRLLEEAAPGPPKAAVLKNVARRIEKTLMAAFEERKCTDKLRFEPKLKDRGLLDLKGVVIKPDSSVP 323 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig11504.972.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig11504.972.1 >prot_H-paniculata_contig11504.972.1 ID=prot_H-paniculata_contig11504.972.1|Name=mRNA_H-paniculata_contig11504.972.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=151bp MQYIGVSRGVQQSLRLHLGRCPVETHFIKVQHITRPSRSLLEIMKESWIAback to top mRNA from alignment at H-paniculata_contig11504:4213..6523+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig11504.972.1 ID=mRNA_H-paniculata_contig11504.972.1|Name=mRNA_H-paniculata_contig11504.972.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=2311bp|location=Sequence derived from alignment at H-paniculata_contig11504:4213..6523+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig11504:4213..6523+ >mRNA_H-paniculata_contig11504.972.1 ID=mRNA_H-paniculata_contig11504.972.1|Name=mRNA_H-paniculata_contig11504.972.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=906bp|location=Sequence derived from alignment at H-paniculata_contig11504:4213..6523+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |