prot_H-paniculata_contig11490.962.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig11490.962.1
Unique Nameprot_H-paniculata_contig11490.962.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length804
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig11490.962.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 299..452
e-value: 1.1E-49
score: 171.5
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 678..796
e-value: 2.6E-27
score: 97.3
coord: 175..298
e-value: 1.6E-26
score: 94.7
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 598..669
e-value: 1.6E-14
score: 55.8
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 453..597
e-value: 1.0E-37
score: 132.3
IPR002885Pentatricopeptide repeatTIGRFAMTIGR00756TIGR00756coord: 290..324
e-value: 9.8E-6
score: 23.4
coord: 221..254
e-value: 6.1E-7
score: 27.2
coord: 500..531
e-value: 0.001
score: 17.1
coord: 535..569
e-value: 9.8E-8
score: 29.7
coord: 395..428
e-value: 1.0E-7
score: 29.6
coord: 466..499
e-value: 3.3E-9
score: 34.4
coord: 677..708
e-value: 5.2E-6
score: 24.3
coord: 640..674
e-value: 5.1E-6
score: 24.3
coord: 710..743
e-value: 6.0E-8
score: 30.4
coord: 256..289
e-value: 6.1E-7
score: 27.2
coord: 325..358
e-value: 1.1E-4
score: 20.2
coord: 605..639
e-value: 2.7E-6
score: 25.2
coord: 430..463
e-value: 3.5E-7
score: 28.0
coord: 360..393
e-value: 6.3E-6
score: 24.0
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 677..705
e-value: 0.007
score: 16.5
coord: 360..390
e-value: 0.0053
score: 16.9
IPR002885Pentatricopeptide repeatPFAMPF13812PPR_3coord: 221..266
e-value: 1.3E-7
score: 31.6
coord: 602..649
e-value: 3.8E-9
score: 36.5
coord: 451..511
e-value: 1.6E-10
score: 40.9
coord: 521..581
e-value: 5.2E-8
score: 32.8
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 707..755
e-value: 2.6E-10
score: 40.3
coord: 287..334
e-value: 7.7E-10
score: 38.8
coord: 392..439
e-value: 4.5E-11
score: 42.8
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 288..322
score: 11.553
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 533..567
score: 11.641
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 358..392
score: 11.203
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 428..462
score: 10.885
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 463..497
score: 12.759
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 323..357
score: 10.611
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 393..427
score: 11.926
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 673..707
score: 11.224
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 498..532
score: 9.262
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 638..672
score: 11.378
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 253..287
score: 11.466
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 218..252
score: 10.95
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 743..777
score: 7.092
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 708..742
score: 12.638
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 603..637
score: 11.531
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 568..598
score: 7.465
NoneNo IPR availablePANTHERPTHR46128FAMILY NOT NAMEDcoord: 369..563
NoneNo IPR availablePANTHERPTHR46128:SF1coord: 320..457
coord: 548..699
NoneNo IPR availablePANTHERPTHR46128FAMILY NOT NAMEDcoord: 548..699
NoneNo IPR availablePANTHERPTHR46128:SF1coord: 218..386
NoneNo IPR availablePANTHERPTHR46128FAMILY NOT NAMEDcoord: 218..386
coord: 494..631
NoneNo IPR availablePANTHERPTHR46128FAMILY NOT NAMEDcoord: 624..788
NoneNo IPR availablePANTHERPTHR46128:SF1coord: 369..563
NoneNo IPR availablePANTHERPTHR46128:SF1coord: 624..788
coord: 494..631
NoneNo IPR availablePANTHERPTHR46128FAMILY NOT NAMEDcoord: 320..457

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig11490contigH-paniculata_contig11490:2695..5106 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig11490.962.1mRNA_H-paniculata_contig11490.962.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig11490 2167..8041 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig11490.962.1 ID=prot_H-paniculata_contig11490.962.1|Name=mRNA_H-paniculata_contig11490.962.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=804bp
MGSSYVDHASRISFHTMRRFVHASNTRGNVRLWQAQMSSSQSTGDSYIVG
VADGPKGVETAAESEVTRSYRPSTEEEPLGRPRDVWVEAPVPERVGRVAA
VGPAGQEVQATVPVHPWASARRNKSKDLRKSSDRRVHGKVGFSPSASVSL
AQGGQRPKRGRASRWDTVVNERVIPEIGQVQRSYMIRLKEAKQRKDWIGA
VGVLQEALARTDSADVVHARMYSIAINVLAKCGKWKLALELMSQMRDNGV
SPNIIIYNSVIAACGNGGQWGKALDMLPQMRAEGIAPDVVSYSSAMTACV
DCGEWERALVLFRQMRVEGTTPNVVSYSTAMKACGDGGQWKQSLNLLREM
QDEGIAANVVVYGTAMKACGDGGQWQTAMGLLREMRAEGITPNQVCYNTA
ITAFGKGGQWERALNTMREMQAEGIPPNFVSYSAVMKACGDGGQWDKTLD
LLREMQAEGIPRDAATYNTVIKACGDNGQWERALDAMQQMRGEGIAPDVV
SYGSAMKACGDSGQWQSTLDLFREMHVEKVARSAVIYTTAMKACGDGGEW
ERALNFLQQMRREGIEPDIASYNAALKACGDSGQDEKTLELLREVEGGCP
ACDVVTYNIAVTACGNTGQWERALQILRQMHAVNIMPNVITYSAAMKACL
DSGQWETTLELLGEMQTEGITPDVIGYSTAMSACGNGGQWERALDILRQM
PAQGIMPDIVSYNTAIQACRDSGQFEKAVELLQEMELEGIKPDGMSYCMA
FTACANGGEMKRALELFRQIRVDPVTGSNTACYNAIILAWSKSCRGAIPL
RWR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011990TPR-like_helical_dom_sf
IPR002885Pentatricopeptide_repeat