mRNA_H-paniculata_contig35234.9383.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig35234.9383.1
Unique NamemRNA_H-paniculata_contig35234.9383.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
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BLAST of mRNA_H-paniculata_contig35234.9383.1 vs. uniprot
Match: A0A6H5KMV4_9PHAE (Lactoylglutathione lyase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KMV4_9PHAE)

HSP 1 Score: 189 bits (479), Expect = 9.750e-59
Identity = 81/105 (77.14%), Postives = 90/105 (85.71%), Query Frame = 1 
Query:    4 VLHDLHFEEWTFSIYFVGYCQESDIPSGPKKRMEWAMNQPGAVELTHNWGTENDPDLKHHNGNDDPRGFGHIGITVPDVYKACRRFEKEGVHFRKTPDGGNMKGL 318
            ++ +LHF EW FSIYFVGYC  S+IP+ PK+R  W   Q GAVELTHNWGTEND DLK+H+GN+DPRGFGHIGITVPDVYKAC RFEKEGV FRKTPDGGNMKGL
Sbjct:  104 LMQELHFAEWEFSIYFVGYCDPSEIPADPKERTRWCFQQAGAVELTHNWGTENDADLKYHSGNEDPRGFGHIGITVPDVYKACERFEKEGVKFRKTPDGGNMKGL 208
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BLAST of mRNA_H-paniculata_contig35234.9383.1 vs. uniprot
Match: D8LK52_ECTSI (Lactoylglutathione lyase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LK52_ECTSI)

HSP 1 Score: 187 bits (474), Expect = 1.950e-58
Identity = 81/105 (77.14%), Postives = 89/105 (84.76%), Query Frame = 1 
Query:    4 VLHDLHFEEWTFSIYFVGYCQESDIPSGPKKRMEWAMNQPGAVELTHNWGTENDPDLKHHNGNDDPRGFGHIGITVPDVYKACRRFEKEGVHFRKTPDGGNMKGL 318
            ++ +LHF EW FSIYFVGYC  S+IPS PK+R  W   Q GAVELTHNWGTEND  LK+H+GN+DPRGFGHIGITVPDVYKAC RFEKEGV FRKTPDGGNMKGL
Sbjct:   56 LMQELHFAEWEFSIYFVGYCDPSEIPSDPKERTRWCFQQAGAVELTHNWGTENDAALKYHSGNEDPRGFGHIGITVPDVYKACERFEKEGVKFRKTPDGGNMKGL 160
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BLAST of mRNA_H-paniculata_contig35234.9383.1 vs. uniprot
Match: A0A6F9DDL5_9ASCI (Lactoylglutathione lyase n=1 Tax=Phallusia mammillata TaxID=59560 RepID=A0A6F9DDL5_9ASCI)

HSP 1 Score: 155 bits (393), Expect = 2.150e-46
Identity = 69/105 (65.71%), Postives = 79/105 (75.24%), Query Frame = 1 
Query:    4 VLHDLHFEEWTFSIYFVGYCQESDIPSGPKKRMEWAMNQPGAVELTHNWGTENDPDLKHHNGNDDPRGFGHIGITVPDVYKACRRFEKEGVHFRKTPDGGNMKGL 318
            +LH +H     FSIYF+GY    DIPS  KKR EW   QPG VELTHNWGTE+D D  +HNGN DPRGFGHIGI+VPDVY AC+RF++ GV + KTPDGG MKGL
Sbjct:   53 LLHTIHMPSMKFSIYFMGYADPKDIPSDEKKRKEWTFRQPGTVELTHNWGTESD-DSTYHNGNSDPRGFGHIGISVPDVYAACKRFDEFGVEYIKTPDGGKMKGL 156
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BLAST of mRNA_H-paniculata_contig35234.9383.1 vs. uniprot
Match: F6ZE91_CIOIN (Lactoylglutathione lyase n=2 Tax=Ciona intestinalis TaxID=7719 RepID=F6ZE91_CIOIN)

HSP 1 Score: 149 bits (375), Expect = 1.350e-43
Identity = 62/105 (59.05%), Postives = 76/105 (72.38%), Query Frame = 1 
Query:    4 VLHDLHFEEWTFSIYFVGYCQESDIPSGPKKRMEWAMNQPGAVELTHNWGTENDPDLKHHNGNDDPRGFGHIGITVPDVYKACRRFEKEGVHFRKTPDGGNMKGL 318
            +L  LHF+   FS+YF+GY    DIP  P +R  W   QPG +ELTHNWG+END  + +HNGN DPRGFGHIG++VPDVY AC RF+K GV + K PD G+MKGL
Sbjct:   53 LLLQLHFDAMKFSLYFMGYADAKDIPDDPTERKTWVFRQPGTIELTHNWGSENDDSVVYHNGNADPRGFGHIGVSVPDVYTACERFDKYGVEYVKKPDAGSMKGL 157
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BLAST of mRNA_H-paniculata_contig35234.9383.1 vs. uniprot
Match: A0A8K0KI60_LADFU (Uncharacterized protein n=1 Tax=Ladona fulva TaxID=123851 RepID=A0A8K0KI60_LADFU)

HSP 1 Score: 147 bits (371), Expect = 5.470e-43
Identity = 62/105 (59.05%), Postives = 81/105 (77.14%), Query Frame = 1 
Query:    4 VLHDLHFEEWTFSIYFVGYCQESDIPSGPKKRMEWAMNQPGAVELTHNWGTENDPDLKHHNGNDDPRGFGHIGITVPDVYKACRRFEKEGVHFRKTPDGGNMKGL 318
            ++  L F    FSIYF+G+  ++DIP+ PK+++ WA+++   +ELTHNWGTE+DPD K+HNGN DPRG+GHIGI VPDVY+AC RFEK GV F K PD G MKG+
Sbjct:   53 LIQKLDFPSMKFSIYFMGFENKADIPADPKEQVVWALSRKATLELTHNWGTESDPDAKYHNGNSDPRGYGHIGIMVPDVYQACERFEKLGVEFVKKPDDGKMKGI 157
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BLAST of mRNA_H-paniculata_contig35234.9383.1 vs. uniprot
Match: A0A1I8NAP6_MUSDO (Lactoylglutathione lyase n=6 Tax=Calyptratae TaxID=43742 RepID=A0A1I8NAP6_MUSDO)

HSP 1 Score: 145 bits (367), Expect = 2.090e-42
Identity = 64/105 (60.95%), Postives = 77/105 (73.33%), Query Frame = 1 
Query:    4 VLHDLHFEEWTFSIYFVGYCQESDIPSGPKKRMEWAMNQPGAVELTHNWGTENDPDLKHHNGNDDPRGFGHIGITVPDVYKACRRFEKEGVHFRKTPDGGNMKGL 318
            +L  L F    FS+YF+GY   +++P   K+R +WAM++   VELTHNWGTENDPD  +HNGN DPRGFGHIGI VPDVY AC+RFE+ GV F K PD G MKGL
Sbjct:   53 LLQKLDFPAAQFSLYFMGYENPAEVPKDTKERTKWAMSRKATVELTHNWGTENDPDQSYHNGNSDPRGFGHIGIMVPDVYAACKRFEELGVEFVKKPDDGRMKGL 157
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BLAST of mRNA_H-paniculata_contig35234.9383.1 vs. uniprot
Match: UPI000626A355 (lactoylglutathione lyase isoform X1 n=2 Tax=Athalia rosae TaxID=37344 RepID=UPI000626A355)

HSP 1 Score: 145 bits (366), Expect = 3.980e-42
Identity = 65/105 (61.90%), Postives = 77/105 (73.33%), Query Frame = 1 
Query:    4 VLHDLHFEEWTFSIYFVGYCQESDIPSGPKKRMEWAMNQPGAVELTHNWGTENDPDLKHHNGNDDPRGFGHIGITVPDVYKACRRFEKEGVHFRKTPDGGNMKGL 318
            +L  L F E  FSIYF+GY Q +DIP+  +K +EW   + GA+ELTHNWGTE DPD K+HNGN DPRG+GHIGITVPDV  AC RF + GV F K P+ G MKGL
Sbjct:   58 LLQKLDFSELKFSIYFLGYEQVNDIPTDKRKCLEWTFGRRGAIELTHNWGTETDPDAKYHNGNSDPRGYGHIGITVPDVEVACERFARLGVEFVKKPNDGKMKGL 162
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BLAST of mRNA_H-paniculata_contig35234.9383.1 vs. uniprot
Match: A0A1A9WR34_9MUSC (Lactoylglutathione lyase n=1 Tax=Glossina brevipalpis TaxID=37001 RepID=A0A1A9WR34_9MUSC)

HSP 1 Score: 144 bits (364), Expect = 5.950e-42
Identity = 64/105 (60.95%), Postives = 77/105 (73.33%), Query Frame = 1 
Query:    4 VLHDLHFEEWTFSIYFVGYCQESDIPSGPKKRMEWAMNQPGAVELTHNWGTENDPDLKHHNGNDDPRGFGHIGITVPDVYKACRRFEKEGVHFRKTPDGGNMKGL 318
            +L  L F E  FS+YF+GY   SD+P    +R +WAM++   VELTHNWGTEN+PD K+H GN DPRGFGHIGI VPDVY AC+RF++ GV F K PD G MKGL
Sbjct:   53 LLQKLDFPEAQFSLYFMGYENPSDVPKDSNERTKWAMSRKATVELTHNWGTENNPDQKYHTGNADPRGFGHIGIMVPDVYAACKRFDELGVEFVKKPDDGRMKGL 157
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BLAST of mRNA_H-paniculata_contig35234.9383.1 vs. uniprot
Match: A0A0K8TTL5_TABBR (Lactoylglutathione lyase n=1 Tax=Tabanus bromius TaxID=304241 RepID=A0A0K8TTL5_TABBR)

HSP 1 Score: 144 bits (364), Expect = 5.950e-42
Identity = 64/105 (60.95%), Postives = 77/105 (73.33%), Query Frame = 1 
Query:    4 VLHDLHFEEWTFSIYFVGYCQESDIPSGPKKRMEWAMNQPGAVELTHNWGTENDPDLKHHNGNDDPRGFGHIGITVPDVYKACRRFEKEGVHFRKTPDGGNMKGL 318
            +L  L F E  FS+YF+GY + SD+PS    R  WAM++   +ELTHNWGTE DPD K+H GN +PRGFGHIGI VPDVY+AC+RFE+ GV F K PD G MKGL
Sbjct:   53 LLQKLDFPEAKFSLYFMGYEKPSDVPSNNGDRTRWAMSRKATIELTHNWGTETDPDAKYHTGNTEPRGFGHIGIMVPDVYEACKRFEELGVDFVKRPDDGRMKGL 157
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BLAST of mRNA_H-paniculata_contig35234.9383.1 vs. uniprot
Match: UPI000C6DA266 (lactoylglutathione lyase-like isoform X1 n=3 Tax=Centruroides sculpturatus TaxID=218467 RepID=UPI000C6DA266)

HSP 1 Score: 145 bits (367), Expect = 7.040e-42
Identity = 64/103 (62.14%), Postives = 74/103 (71.84%), Query Frame = 1 
Query:    4 VLHDLHFEEWTFSIYFVGYCQESDIPSGPKKRMEWAMNQPGAVELTHNWGTENDPDLKHHNGNDDPRGFGHIGITVPDVYKACRRFEKEGVHFRKTPDGGNMK 312
            +LH + F E  FS++F+GY   SDIP  PK R EWAM++   +ELTHNWGTENDPD  +HNGN DPRGFGHIG+ VPDV KAC RFE  GV F K P  G MK
Sbjct:   93 LLHKMDFPEMKFSLFFMGYENASDIPEDPKARCEWAMSRKATLELTHNWGTENDPDQSYHNGNSDPRGFGHIGLMVPDVNKACERFESLGVKFVKRPSDGKMK 195
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig35234.9383.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KMV4_9PHAE9.750e-5977.14Lactoylglutathione lyase n=1 Tax=Ectocarpus sp. CC... [more]
D8LK52_ECTSI1.950e-5877.14Lactoylglutathione lyase n=1 Tax=Ectocarpus silicu... [more]
A0A6F9DDL5_9ASCI2.150e-4665.71Lactoylglutathione lyase n=1 Tax=Phallusia mammill... [more]
F6ZE91_CIOIN1.350e-4359.05Lactoylglutathione lyase n=2 Tax=Ciona intestinali... [more]
A0A8K0KI60_LADFU5.470e-4359.05Uncharacterized protein n=1 Tax=Ladona fulva TaxID... [more]
A0A1I8NAP6_MUSDO2.090e-4260.95Lactoylglutathione lyase n=6 Tax=Calyptratae TaxID... [more]
UPI000626A3553.980e-4261.90lactoylglutathione lyase isoform X1 n=2 Tax=Athali... [more]
A0A1A9WR34_9MUSC5.950e-4260.95Lactoylglutathione lyase n=1 Tax=Glossina brevipal... [more]
A0A0K8TTL5_TABBR5.950e-4260.95Lactoylglutathione lyase n=1 Tax=Tabanus bromius T... [more]
UPI000C6DA2667.040e-4262.14lactoylglutathione lyase-like isoform X1 n=3 Tax=C... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig35234contigH-paniculata_contig35234:929..1557 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score187.6
Seed ortholog evalue3e-45
Seed eggNOG ortholog2880.D8LK52
Preferred nameGLO1
KEGG rclassRC00004,RC00740
KEGG koko:K01759,ko:K16803,ko:K21768
KEGG ReactionR02530
KEGG Pathwayko00620,map00620
Hectar predicted targeting categoryother localisation
GOsGO:0001101,GO:0002376,GO:0002520,GO:0002521,GO:0002573,GO:0003674,GO:0003824,GO:0004462,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005829,GO:0005886,GO:0005975,GO:0006081,GO:0006082,GO:0006089,GO:0006090,GO:0006355,GO:0006357,GO:0006518,GO:0006575,GO:0006749,GO:0006790,GO:0006807,GO:0006950,GO:0006970,GO:0007275,GO:0008150,GO:0008152,GO:0008270,GO:0009056,GO:0009414,GO:0009415,GO:0009438,GO:0009628,GO:0009636,GO:0009651,GO:0009889,GO:0009987,GO:0010035,GO:0010468,GO:0010556,GO:0010941,GO:0016020,GO:0016829,GO:0016846,GO:0019219,GO:0019222,GO:0019243,GO:0019752,GO:0019904,GO:0030097,GO:0030099,GO:0030154,GO:0030316,GO:0031323,GO:0031326,GO:0032501,GO:0032502,GO:0032787,GO:0033554,GO:0034641,GO:0042180,GO:0042182,GO:0042221,GO:0042981,GO:0043066,GO:0043067,GO:0043069,GO:0043167,GO:0043169,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043436,GO:0043603,GO:0044237,GO:0044238,GO:0044248,GO:0044281,GO:0044282,GO:0044424,GO:0044444,GO:0044464,GO:0046185,GO:0046872,GO:0046914,GO:0048513,GO:0048519,GO:0048523,GO:0048534,GO:0048731,GO:0048856,GO:0048869,GO:0050789,GO:0050794,GO:0050896,GO:0051171,GO:0051186,GO:0051252,GO:0051596,GO:0051716,GO:0060255,GO:0060548,GO:0061727,GO:0065007,GO:0070887,GO:0071214,GO:0071470,GO:0071704,GO:0071944,GO:0080090,GO:0097237,GO:0098754,GO:0104004,GO:1901564,GO:1901575,GO:1901615,GO:1901700,GO:1903506,GO:1990748,GO:2000112,GO:2001141
EggNOG free text desc.lactoylglutathione lyase activity
EggNOG OGsCOG0346@1,KOG2944@2759
EC4.4.1.5
COG Functional cat.E
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko03036,ko04812
Exons2
Model size320
Cds size318
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930089.5564895-CDS-H-paniculata_contig35234:928..11261622930089.5564895-CDS-H-paniculata_contig35234:928..1126Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig35234 929..1126 -
1691481141.5509622-CDS-H-paniculata_contig35234:928..11261691481141.5509622-CDS-H-paniculata_contig35234:928..1126Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig35234 929..1126 -
1622930089.5689073-CDS-H-paniculata_contig35234:1437..15571622930089.5689073-CDS-H-paniculata_contig35234:1437..1557Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig35234 1438..1557 -
1691481141.560963-CDS-H-paniculata_contig35234:1437..15571691481141.560963-CDS-H-paniculata_contig35234:1437..1557Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig35234 1438..1557 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig35234.9383.1prot_H-paniculata_contig35234.9383.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig35234 929..1557 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig35234.9383.1

>prot_H-paniculata_contig35234.9383.1 ID=prot_H-paniculata_contig35234.9383.1|Name=mRNA_H-paniculata_contig35234.9383.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=106bp
GVLHDLHFEEWTFSIYFVGYCQESDIPSGPKKRMEWAMNQPGAVELTHNW
GTENDPDLKHHNGNDDPRGFGHIGITVPDVYKACRRFEKEGVHFRKTPDG
GNMKGL
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mRNA from alignment at H-paniculata_contig35234:929..1557-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig35234.9383.1 ID=mRNA_H-paniculata_contig35234.9383.1|Name=mRNA_H-paniculata_contig35234.9383.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=629bp|location=Sequence derived from alignment at H-paniculata_contig35234:929..1557- (Halopteris paniculata Hal_grac_a_UBK monoicous)
GGGGTGCTGCACGACCTGCACTTCGAGGAGTGGACGTTCAGCATTTATTT
CGTCGGATATTGCCAGGAATCCGACATTCCGTCCGGCCCCAAGAAACGGA
TGGAGTGGGCAATGAATCAGGTGCGTCTTGCTGGGGGGGGATATCGTTCG
ATATCCTGCTGTATCCTGTGAACTACGGTAATACTCCGTCCTCAACAACT
AAGGCACGCGAAACGTAAACATGATCCCCCACCATCGCCGAGAAAGCACG
GCATGCTTCGCCGTATGTTATTTCCCCAATTGTACACATTTGAACGGGGT
CTTGTTGTGCTTTACGTTATACGTGCAGGTGGATTCGTTTATTTACAATC
AAATGTTTCTTCTCTACGGTCTATTTTCGACTTACGCGAGTAACCTTAGA
TAGATTTTCTCGTCATGTTTTGTTTTGACAGCCAGGAGCTGTAGAACTAA
CGCACAACTGGGGGACGGAGAACGATCCCGACCTCAAGCATCACAATGGC
AACGATGACCCACGAGGGTTCGGTCACATCGGAATCACCGTGCCGGATGT
TTATAAAGCGTGCCGGAGGTTCGAGAAGGAAGGTGTCCACTTCCGCAAGA
CCCCGGACGGAGGAAACATGAAGGGTCTG
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Coding sequence (CDS) from alignment at H-paniculata_contig35234:929..1557-

>mRNA_H-paniculata_contig35234.9383.1 ID=mRNA_H-paniculata_contig35234.9383.1|Name=mRNA_H-paniculata_contig35234.9383.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=636bp|location=Sequence derived from alignment at H-paniculata_contig35234:929..1557- (Halopteris paniculata Hal_grac_a_UBK monoicous)
GGGGTGCTGCACGACCTGCACTTCGAGGAGTGGACGTTCAGCATTTATTT
CGTCGGATATTGCCAGGAATCCGACATTCCGTCCGGCCCCAAGAAACGGA
TGGAGTGGGCAATGAATCAGGGGGTGCTGCACGACCTGCACTTCGAGGAG
TGGACGTTCAGCATTTATTTCGTCGGATATTGCCAGGAATCCGACATTCC
GTCCGGCCCCAAGAAACGGATGGAGTGGGCAATGAATCAGCCAGGAGCTG
TAGAACTAACGCACAACTGGGGGACGGAGAACGATCCCGACCTCAAGCAT
CACAATGGCAACGATGACCCACGAGGGTTCGGTCACATCGGAATCACCGT
GCCGGATGTTTATAAAGCGTGCCGGAGGTTCGAGAAGGAAGGTGTCCACT
TCCGCAAGACCCCGGACGGAGGAAACATGAAGGGTCTGCCAGGAGCTGTA
GAACTAACGCACAACTGGGGGACGGAGAACGATCCCGACCTCAAGCATCA
CAATGGCAACGATGACCCACGAGGGTTCGGTCACATCGGAATCACCGTGC
CGGATGTTTATAAAGCGTGCCGGAGGTTCGAGAAGGAAGGTGTCCACTTC
CGCAAGACCCCGGACGGAGGAAACATGAAGGGTCTG
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