mRNA_H-paniculata_contig35206.9373.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig35206.9373.1 vs. uniprot
Match: A0A6H5KDE6_9PHAE (Lactamase_B domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KDE6_9PHAE) HSP 1 Score: 125 bits (314), Expect = 6.140e-33 Identity = 57/103 (55.34%), Postives = 79/103 (76.70%), Query Frame = 1
Query: 1 NTTVVMVVDLIFPGWVPFYSMALAEDVGDFYAALDELNNLDFDVLVGGHVSRLGTKEDVQVQVDFYADVLAGMKLGFSLISFADVGAGMGVANPASPNLGNGW 309
+T+V VVD+IFPGWVPF+S+A + ++G +Y A+DE+ + D DVLVGGH+SR+GTK DVQ+ DFY DVL G + G + +S ADV +G GV +P++PN GN W
Sbjct: 159 DTSVFFVVDVIFPGWVPFFSVAASSEIGGYYDAMDEILSYDMDVLVGGHLSRMGTKADVQLNKDFYDDVLEGARTGVTTVSVADVISGTGVFDPSNPNAGNLW 261
BLAST of mRNA_H-paniculata_contig35206.9373.1 vs. uniprot
Match: D8LEX6_ECTSI (Beta-lactamase domain protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEX6_ECTSI) HSP 1 Score: 116 bits (290), Expect = 9.210e-30 Identity = 52/103 (50.49%), Postives = 72/103 (69.90%), Query Frame = 1
Query: 1 NTTVVMVVDLIFPGWVPFYSMALAEDVGDFYAALDELNNLDFDVLVGGHVSRLGTKEDVQVQVDFYADVLAGMKLGFSLISFADVGAGMGVANPASPNLGNGW 309
+T+V MVVD +FPGW+P + L DV +Y A+D + DFDVL+ GH++R+GTK DVQ+ D +AD+L G GF+ +S ADVGAG V++P +PN GN W
Sbjct: 103 DTSVFMVVDTVFPGWIPLFPTNLNPDVASYYEAMDVILGYDFDVLMAGHLTRMGTKADVQLNRDLFADILEGATAGFAAVSQADVGAGTAVSDPTNPNAGNVW 205
BLAST of mRNA_H-paniculata_contig35206.9373.1 vs. uniprot
Match: A0A7D7VBD4_9ARCH (MBL fold metallo-hydrolase n=1 Tax=Nitrosopumilus sp. TaxID=2024843 RepID=A0A7D7VBD4_9ARCH) HSP 1 Score: 93.6 bits (231), Expect = 2.800e-21 Identity = 41/94 (43.62%), Postives = 64/94 (68.09%), Query Frame = 1
Query: 1 NTTVVMVVDLIFPGWVPFYSMALAEDVGDFYAALDELNNLDFDVLVGGHVSRLGTKEDVQVQVDFYADVLAGMKLGFSLISFADVGAGMGVANP 282
N V+M+VD++FPGW PF +A+ +DV F AA D++ DFD +GGH++RLGT EDVQ+Q +++ D+ A + +SF ++G +G +NP
Sbjct: 100 NQKVLMLVDVVFPGWTPFKDLAMVQDVTAFLAAHDKILEYDFDTYIGGHLTRLGTVEDVQIQKEYFQDIQASAGMTNQEVSFMEIGQEVGFSNP 193
BLAST of mRNA_H-paniculata_contig35206.9373.1 vs. uniprot
Match: A0A654LUP5_9ARCH (Carbapenem-hydrolyzing beta-lactamase BlaB-1 n=1 Tax=Candidatus Nitrosocosmicus oleophilus TaxID=1353260 RepID=A0A654LUP5_9ARCH) HSP 1 Score: 90.1 bits (222), Expect = 3.300e-19 Identity = 43/94 (45.74%), Postives = 62/94 (65.96%), Query Frame = 1
Query: 1 NTTVVMVVDLIFPGWVPFYSMALAEDVGDFYAALDELNNLDFDVLVGGHVSRLGTKEDVQVQVDFYADVLAGMKLGFSLISFADVGAGMGVANP 282
N +M VD+IFPGWVPF +A+ ++V F A D +++ DFD LVGGH++RLGT EDV++Q +F D++ K S I+F D + G+ NP
Sbjct: 224 NQKTLMFVDVIFPGWVPFKDLAITKNVSGFVQAHDIVSSYDFDTLVGGHLTRLGTMEDVKIQKEFITDLINASKTANSKINFMDFVSKYGLTNP 317
BLAST of mRNA_H-paniculata_contig35206.9373.1 vs. uniprot
Match: A0A3N5HH40_9BACT (MBL fold metallo-hydrolase n=1 Tax=bacterium TaxID=1869227 RepID=A0A3N5HH40_9BACT) HSP 1 Score: 86.7 bits (213), Expect = 2.280e-18 Identity = 43/95 (45.26%), Postives = 61/95 (64.21%), Query Frame = 1
Query: 1 NTTVVMVVDLIFPGWVPFYSMALAEDVGDFYAALDE-LNNLDFDVLVGGHVSRLGTKEDVQVQVDFYADVLAGMKLGFSLISFADVGAGMGVANP 282
N V+M+VD+IFPGWVPF +A+A+D F A D L N DFD +VGGH++R+GT+ DV+VQ +F D+ +SF D+ A +G +P
Sbjct: 123 NQRVLMLVDIIFPGWVPFAYLAIAKDTAGFIGAHDTTLKNYDFDTIVGGHLTRIGTRADVEVQKEFVLDLERAAARANQNVSFMDIAARVGFDDP 217
BLAST of mRNA_H-paniculata_contig35206.9373.1 vs. uniprot
Match: UPI001BDDF298 (MBL fold metallo-hydrolase n=1 Tax=Bacillus sp. SM2101 TaxID=2805366 RepID=UPI001BDDF298) HSP 1 Score: 85.5 bits (210), Expect = 1.530e-17 Identity = 41/91 (45.05%), Postives = 56/91 (61.54%), Query Frame = 1
Query: 10 VVMVVDLIFPGWVPFYSMALAEDVGDFYAALDELNNLDFDVLVGGHVSRLGTKEDVQVQVDFYADVLAGMKLGFSLISFADVGAGMGVANP 282
V+M VD+IFPGWVPF +AL+ED+ + A ++ DFD LV GHV+RLGT+EDVQ Q+D+ DV + +G +G NP
Sbjct: 217 VLMAVDIIFPGWVPFRYLALSEDIPGYIEAHAKIMEYDFDTLVAGHVTRLGTREDVQTQIDYMNDVQKNAENALKTTDLNAIGQNVGFENP 307
BLAST of mRNA_H-paniculata_contig35206.9373.1 vs. uniprot
Match: A0A0F8YYE2_9ZZZZ (Uncharacterized protein (Fragment) n=1 Tax=marine sediment metagenome TaxID=412755 RepID=A0A0F8YYE2_9ZZZZ) HSP 1 Score: 80.9 bits (198), Expect = 2.890e-17 Identity = 38/91 (41.76%), Postives = 55/91 (60.44%), Query Frame = 1
Query: 10 VVMVVDLIFPGWVPFYSMALAEDVGDFYAALDELNNLDFDVLVGGHVSRLGTKEDVQVQVDFYADVLAGMKLGFSLISFADVGAGMGVANP 282
V+M+VD++FPGW PF +A+AEDV F A D++ DFD VGGH++RLGT EDV++Q ++ D+ F + +G NP
Sbjct: 7 VLMLVDVVFPGWTPFKDLAMAEDVPYFLTAHDKILEFDFDTYVGGHLTRLGTSEDVEIQKAYFDDIQKNAAEANQQADFMAIAQQVGFENP 97
BLAST of mRNA_H-paniculata_contig35206.9373.1 vs. uniprot
Match: A0A838D836_9ARCH (MBL fold metallo-hydrolase n=2 Tax=Thaumarchaeota TaxID=651137 RepID=A0A838D836_9ARCH) HSP 1 Score: 84.7 bits (208), Expect = 3.180e-17 Identity = 41/89 (46.07%), Postives = 58/89 (65.17%), Query Frame = 1
Query: 16 MVVDLIFPGWVPFYSMALAEDVGDFYAALDELNNLDFDVLVGGHVSRLGTKEDVQVQVDFYADVLAGMKLGFSLISFADVGAGMGVANP 282
M+VD+IFPGWVPF +A+ +V F A D +++ DFD LVGGH++RLG EDV +Q +F D++ K S I+F D + G+ NP
Sbjct: 229 MLVDVIFPGWVPFKDLAITTNVPGFVQAHDIVSSYDFDTLVGGHLTRLGNVEDVNIQKEFITDLVNASKAANSKINFMDYVSKYGLTNP 317
BLAST of mRNA_H-paniculata_contig35206.9373.1 vs. uniprot
Match: A0A6A7LIY9_9ARCH (MBL fold metallo-hydrolase n=1 Tax=Nitrososphaeraceae archaeon TaxID=2169593 RepID=A0A6A7LIY9_9ARCH) HSP 1 Score: 84.3 bits (207), Expect = 4.070e-17 Identity = 42/91 (46.15%), Postives = 59/91 (64.84%), Query Frame = 1
Query: 1 NTTVVMVVDLIFPGWVPFYSMALAEDVGDFYAALD-ELNNLDFDVLVGGHVSRLGTKEDVQVQVDFYADVLAGMKLGFSLISFADVGAGMG 270
N +M+VD++FPGWVPF +A+AEDV F A D LNN DFD VGGH++RLGT++DV Q +F +D+ S + F+D+ +G
Sbjct: 195 NQKTLMLVDVVFPGWVPFVYLAIAEDVAGFIKAHDIALNNYDFDTFVGGHLTRLGTRDDVITQQEFVSDLEKAAGKANSEVQFSDIAKQVG 285
BLAST of mRNA_H-paniculata_contig35206.9373.1 vs. uniprot
Match: UPI0018E48D84 (MBL fold metallo-hydrolase n=1 Tax=Geodermatophilus chilensis TaxID=2035835 RepID=UPI0018E48D84) HSP 1 Score: 83.6 bits (205), Expect = 5.460e-17 Identity = 40/100 (40.00%), Postives = 61/100 (61.00%), Query Frame = 1
Query: 10 VVMVVDLIFPGWVPFYSMALAEDVGDFYAALDELNNLDFDVLVGGHVSRLGTKEDVQVQVDFYADVLAGMKLGFSLISFADVGAGMGVANPASPNLGNGW 309
++M +D+I PGWVPF ++ +D+ + A D++ DFDVLV GHV+RLG +EDV+VQ ++ D+ A + + V GVA+P+ P GN W
Sbjct: 168 ILMKIDVICPGWVPFKDLSHVKDMPGYLKAHDDVLTYDFDVLVAGHVARLGAREDVEVQREYVMDLKAHATEAIETVDISRVFEESGVADPSRPGAGNPW 267 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig35206.9373.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig35206.9373.1 >prot_H-paniculata_contig35206.9373.1 ID=prot_H-paniculata_contig35206.9373.1|Name=mRNA_H-paniculata_contig35206.9373.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=99bp MVVDLIFPGWVPFYSMALAEDVGDFYAALDELNNLDFDVLVGGHVSRLGTback to top mRNA from alignment at H-paniculata_contig35206:982..2013- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig35206.9373.1 ID=mRNA_H-paniculata_contig35206.9373.1|Name=mRNA_H-paniculata_contig35206.9373.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=1032bp|location=Sequence derived from alignment at H-paniculata_contig35206:982..2013- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig35206:982..2013- >mRNA_H-paniculata_contig35206.9373.1 ID=mRNA_H-paniculata_contig35206.9373.1|Name=mRNA_H-paniculata_contig35206.9373.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=594bp|location=Sequence derived from alignment at H-paniculata_contig35206:982..2013- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |