mRNA_H-paniculata_contig11438.935.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
Overview
Homology
BLAST of mRNA_H-paniculata_contig11438.935.1 vs. uniprot
Match: A0A6H5JQI6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQI6_9PHAE) HSP 1 Score: 120 bits (301), Expect = 2.120e-29 Identity = 60/113 (53.10%), Postives = 76/113 (67.26%), Query Frame = 1 Query: 7 GANEVKHVGLATRAFPGTHTARDISGWMNEIVTEFFGVMMGTIV-----FLGFTVDQGANVFNAIDSLGISVVKCNAHRLNTALMWVLGIASNTNTCKNKPTEKVMTRLAALI 330 G +V V LATRAFPG+HTA DI W+ + E+F +MG V FL FTVDQG NV NA +LG+ VV+CN HR+N+A++W LGIA + TCKNKP +K LAAL+ Sbjct: 122 GDTDVSRVSLATRAFPGSHTADDIKPWIEALTLEYFTDLMGGSVESQDVFLAFTVDQGKNVVNACTALGVPVVECNCHRVNSAVLWALGIAGSATTCKNKPMKK----LAALV 230
BLAST of mRNA_H-paniculata_contig11438.935.1 vs. uniprot
Match: A0A6H5JRT6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRT6_9PHAE) HSP 1 Score: 119 bits (297), Expect = 8.580e-29 Identity = 61/113 (53.98%), Postives = 75/113 (66.37%), Query Frame = 1 Query: 7 GANEVKHVGLATRAFPGTHTARDISGWMNEIVTEFFGVMMGTIV-----FLGFTVDQGANVFNAIDSLGISVVKCNAHRLNTALMWVLGIASNTNTCKNKPTEKVMTRLAALI 330 G+ +V V LA RAFPGTHTA DIS W+ E+ E+F MG V FL FTVDQG NV NA +LG+ VVKCN HR+NTA++W LGIA N +NK +M +LAAL+ Sbjct: 311 GSTDVTRVALACRAFPGTHTADDISPWIEELTREYFADFMGEDVEPKDVFLAFTVDQGGNVVNACKALGVPVVKCNCHRVNTAVLWALGIAGNGR--RNKVMGDLMKKLAALV 421
BLAST of mRNA_H-paniculata_contig11438.935.1 vs. uniprot
Match: A0A6H5JXV5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXV5_9PHAE) HSP 1 Score: 117 bits (294), Expect = 1.320e-28 Identity = 56/111 (50.45%), Postives = 75/111 (67.57%), Query Frame = 1 Query: 13 NEVKHVGLATRAFPGTHTARDISGWMNEIVTEFFGVMMGTIV-----FLGFTVDQGANVFNAIDSLGISVVKCNAHRLNTALMWVLGIASNTNTCKNKPTEKVMTRLAALI 330 ++V V LATRAFPG+HTA DI W+ + E+F ++G V FLGFTVDQG N+ NA +LG+ VV+CN HR+N+A++W LGIA TCKNK +M +LAA + Sbjct: 121 DDVTRVALATRAFPGSHTAEDIKPWIEALTLEYFKDLIGPSVQPHDVFLGFTVDQGKNIVNAYTALGVPVVECNCHRVNSAVLWALGIAGCARTCKNKLMGDLMKKLAASV 231
BLAST of mRNA_H-paniculata_contig11438.935.1 vs. uniprot
Match: A0A6H5JZU3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZU3_9PHAE) HSP 1 Score: 118 bits (295), Expect = 1.390e-28 Identity = 59/113 (52.21%), Postives = 75/113 (66.37%), Query Frame = 1 Query: 7 GANEVKHVGLATRAFPGTHTARDISGWMNEIVTEFFGVMMGTIV-----FLGFTVDQGANVFNAIDSLGISVVKCNAHRLNTALMWVLGIASNTNTCKNKPTEKVMTRLAALI 330 G +V V LATRAFPG+HTA DI W+ + E+ +MG V FL FTVDQG NV NA +LG+ VV+CN HR+N+A++W LGIA + TCKNKP +K LAAL+ Sbjct: 122 GDTDVSRVSLATRAFPGSHTADDIKPWIEALTLEYLTDLMGGSVESQDVFLAFTVDQGKNVVNACTALGVPVVECNCHRVNSAVLWALGIAGSVTTCKNKPMKK----LAALV 230
BLAST of mRNA_H-paniculata_contig11438.935.1 vs. uniprot
Match: A0A6H5KJ52_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJ52_9PHAE) HSP 1 Score: 115 bits (288), Expect = 1.400e-27 Identity = 61/120 (50.83%), Postives = 75/120 (62.50%), Query Frame = 1 Query: 10 ANEVKHVGLATRAFPGTHTARDISGWMNE--------IVTEFFGVMMGTIV-----FLGFTVDQGANVFNAIDSLGISVVKCNAHRLNTALMWVLGIASNTNTCKNKPTEKVMTRLAALI 330 A + VGLATRAFPG+HTA DI W+ + + TEFF MMG V FL FTVDQG NV NA +L + V+KCNAHRLN+ MW LGI + T +N EK+M RLAA++ Sbjct: 294 ATTITRVGLATRAFPGSHTAADIEPWIEKASFTTFKLLTTEFFADMMGENVQPKDVFLAFTVDQGGNVVNACRNLDVEVLKCNAHRLNSVTMWALGINGSIRTGENPAMEKLMKRLAAVV 413
BLAST of mRNA_H-paniculata_contig11438.935.1 vs. uniprot
Match: A0A6H5JTB8_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTB8_9PHAE) HSP 1 Score: 107 bits (266), Expect = 1.240e-24 Identity = 52/113 (46.02%), Postives = 72/113 (63.72%), Query Frame = 1 Query: 7 GANEVKHVGLATRAFPGTHTARDISGWMNEIVTEFFGVMMG-----TIVFLGFTVDQGANVFNAIDSLGISVVKCNAHRLNTALMWVLGIASNTNTCKNKPTEKVMTRLAALI 330 G ++ + LA RAFPG+HTA DI W+ ++ E+F MG + VFL FTVDQG N+ NA +LG++VV+CN HRLNTA++W LGIA N +M +LAA++ Sbjct: 118 GDTDMTRIALAARAFPGSHTAEDIQPWIEKLTLEYFSGFMGESVQPSDVFLAFTVDQGKNIINACTALGVTVVECNCHRLNTAVVWALGIAGKGRL--NPAMGTLMKKLAAMV 228
BLAST of mRNA_H-paniculata_contig11438.935.1 vs. uniprot
Match: A0A6H5JGG8_9PHAE (Dimer_Tnp_hAT domain-containing protein n=4 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGG8_9PHAE) HSP 1 Score: 107 bits (266), Expect = 1.310e-24 Identity = 52/113 (46.02%), Postives = 72/113 (63.72%), Query Frame = 1 Query: 7 GANEVKHVGLATRAFPGTHTARDISGWMNEIVTEFFGVMMG-----TIVFLGFTVDQGANVFNAIDSLGISVVKCNAHRLNTALMWVLGIASNTNTCKNKPTEKVMTRLAALI 330 G ++ + LA RAFPG+HTA DI W+ ++ E+F MG + VFL FTVDQG N+ NA +LG++VV+CN HRLNTA++W LGIA N +M +LAA++ Sbjct: 313 GDTDMTRIALAARAFPGSHTAEDIQPWIEKLTLEYFSGFMGESVQPSDVFLAFTVDQGKNIINACTALGVTVVECNCHRLNTAVVWALGIAGKGRL--NPAMGTLMKKLAAMV 423
BLAST of mRNA_H-paniculata_contig11438.935.1 vs. uniprot
Match: A0A6H5KDJ6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KDJ6_9PHAE) HSP 1 Score: 90.1 bits (222), Expect = 1.030e-18 Identity = 42/85 (49.41%), Postives = 58/85 (68.24%), Query Frame = 1 Query: 91 NEIVTEFFGVMMG-----TIVFLGFTVDQGANVFNAIDSLGISVVKCNAHRLNTALMWVLGIASNTNTCKNKPTEKVMTRLAALI 330 +++ E+FG MG + VFL FTVDQG NV NA +LG+ VVKCN HR+N+A++W LGIA + TC+N +M +LAAL+ Sbjct: 5 SQLTKEYFGGFMGESVEPSDVFLAFTVDQGGNVVNACTALGVQVVKCNCHRINSAVVWALGIAGSATTCRNTKMGGLMKKLAALV 89
BLAST of mRNA_H-paniculata_contig11438.935.1 vs. uniprot
Match: A0A6H5KAS2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KAS2_9PHAE) HSP 1 Score: 68.9 bits (167), Expect = 2.740e-11 Identity = 32/64 (50.00%), Postives = 45/64 (70.31%), Query Frame = 1 Query: 139 FLGFTVDQGANVFNAIDSLGISVVKCNAHRLNTALMWVLGIASNTNTCKNKPTEKVMTRLAALI 330 FL FTVDQG N+ NA +L ++VV+CN HR+NTA++W LGIA+ KN +M +LAA++ Sbjct: 11 FLAFTVDQGKNIINACTALDVTVVECNCHRVNTAVVWALGIAAKGR--KNPTMGTLMKKLAAMV 72 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig11438.935.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 9
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig11438.935.1 >prot_H-paniculata_contig11438.935.1 ID=prot_H-paniculata_contig11438.935.1|Name=mRNA_H-paniculata_contig11438.935.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=115bp PPGANEVKHVGLATRAFPGTHTARDISGWMNEIVTEFFGVMMGTIVFLGFback to top mRNA from alignment at H-paniculata_contig11438:2260..2831- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig11438.935.1 ID=mRNA_H-paniculata_contig11438.935.1|Name=mRNA_H-paniculata_contig11438.935.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=572bp|location=Sequence derived from alignment at H-paniculata_contig11438:2260..2831- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig11438:2260..2831- >mRNA_H-paniculata_contig11438.935.1 ID=mRNA_H-paniculata_contig11438.935.1|Name=mRNA_H-paniculata_contig11438.935.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=690bp|location=Sequence derived from alignment at H-paniculata_contig11438:2260..2831- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |