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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Exons | 7 |
| Model size | 4047 |
| Cds size | 1023 |
| Stop | 1 |
| Start | 1 |
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig3462.9238.1 >prot_H-paniculata_contig3462.9238.1 ID=prot_H-paniculata_contig3462.9238.1|Name=mRNA_H-paniculata_contig3462.9238.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=341bp
MLKDIEPGDANPASGDIIDDAATGAEIPDDANFDKVCGLSKGVLCERVAV
PGSKTGSTVSSPKMAEMSHLQEAAVHLEDLHEVVNKAGIQTGIGGFIINS
GLVKLKEAQQDQLGAMENIARCVDILVRFPGLCNMRMAMHSIHCITLSLA
AAEERETYRQLADAFNAVRFPGTQPIPPIEERLTNDLCDDIMCSWMQKSI
KMPQAVRYMITKSPGDGVSADNVSAAALQDVVDCALPEEFCNLHAMRSQP
NTHVLVEDGAEITQELADLALVQWPDCSGNVATAPPSVDTSSGFGGSDLD
HARCEATDEDLATEDWLGVAEALLTGATTEDGTGVGGTLA* back to topmRNA from alignment at H-paniculata_contig3462:9810..16336- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_H-paniculata_contig3462.9238.1 ID=mRNA_H-paniculata_contig3462.9238.1|Name=mRNA_H-paniculata_contig3462.9238.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=6527bp|location=Sequence derived from alignment at H-paniculata_contig3462:9810..16336- (Halopteris paniculata Hal_grac_a_UBK monoicous)
TACGGCCTTCGTAGAGGTGGATTCACTTTGATGTTACCGCTGCAAATGCA
AATATTCTTGTGATAAATCTACTCAGATATATGCCGCTAATGTAGTCAGT
GATGCACAGAAACCTGTTTCTCCTGTGCTTCTCTTGTGTTCTCAACGAGT
GAACGCTTCGGTTAATCGCGCGAGGATATTATACGCATGTTCAAGTTCAA
TCCTGTGTGCCCAAGATTTACTGCGTGAGTGGTCGTTGCGCACATGGAAC
CAAGGTAAAACTCCAGTACGTTTAGTGGACAATCTCTGACACACCGTGTT
TGCATCCAACGAACCGAGAGTACATTACAGGGCGCTTTCGCTTCAAGGTT
ACCGAAACTTTCAATCTTGAAAGGTTAGACTGAGATGCATGTAGTGTAAT
ACATGTTGAAGGCGATGGTTTTCACGATGTTTTCATTTCGTGCTGTAGCA
TGGCAATTATTTTGATTGCCGTCCAGAGCAGATGTTACTTGCGATTGTTT
TTGTCCAAATGTTTCACCCTCTGGACACATACGAATGCTTGGCGTATTCG
TCACGAAAATTGAAAAAGCATTCAGCTCAGTCTCAGAATGAGCGGACACA
TCGAATAAAGTGCCCACTCTTGTCCATTCCATTTACGAGTATGATTAGCA
GTCGTGGATGGTCCGGGGGCCATAGAATACACGAGCTTATTCTGAAACTC
AGGTGAATACTTTTCAATTTTCGTGGCGAACTCTTAAGTACTCGTATTTT
CCGGCAGGTGAAGCGTTTCACCTACCGGACAAATACGAATACTTGAAAAT
GGTTTTCACAAAAAACTAAAACGAGCATAATTAGCAGTCGTGGATGGTCC
GGGGCATACAGAACACGTAAGCTCATTCAGAAACTCGGGCGAATACTCTA
AATGGTCGTCGCGATTACGCCAAGTATTCGTAGTTGTCCGGGGGGTGAAA
TGTTTTCACATGTTTGAGTACTGAGTATAACAAAACGAAGAGCATGGGCG
ATTCATCACTTCCGTTTGTCGTAGTGAGCTACTATCTATCCATGCATGAT
GGGTTTTCACCGTAGATCGGTGCGGTAATAATACTCGACTATCCCGGTTT
AGCCCTGTGCAAAATCAGTGTACCATAATGTGGCCGTTTCAGAACAGTTG
TTCAGCATTGTATTCGAGTAAAAGCTAAAACGGATGTTTTTGGGCAAGTG
CCTTAATCCGAGCACAACGAGTCGTTGCGAACGTAGACAGTGGGTCATGA
ATTTTGAATAATAAATGTGTACGAGGAGAAACACCAGCTGCATGGGGGTA
GCCTGGAGTGTACTGTTGATGAATTTTACCATACGCGTTCAGTAGTGCGT
GTTTGCTCGCAGTTGTTGCTTCGGTAATCGGGTATCATCGGACGCTGATC
GCAATTCAGCTGATCTCGTGATGTAAAGCAATGGGCGCTTCATGACCATT
GTGTTCCCTTGGGCCACTTCCTCCGCTTGTGCGACCGCCCCAGCAATTAT
TGCCGCGACTAGTTGACGACCATGTTTCTGGCTGCTAGTGTAATACTCAT
CGCTGATTTGTCCGTGTTTTTCTGGTGATACATTCCCCACCTCCCCATTT
ACGGATGAACAGGACTTCGTCTTTTTAGTTACCTGCATCCAGGAAGCACG
CGTTCTGCACAACGAGACCACCGATTTGGCTCAGCTGAAGGCGTTCTCCG
AGAGCAGAAGCCTTTCCTCTCTGCGGGTACGCCTCCGGCTCCACCGGTGG
GGAGAGGGCTATGTTGCGTAAATGACTTGGCAAATATCCCAGCCTTCCCT
ACGTTGTGGTTGGAGCAGTAGCCCACATTGTGACAGGTTGACAACATGGT
TGTAGTGTACATTTGAGTTTGAAAGAATGTTGTTAGCCTTGATCACAACA
CCGCAAATGTTGTAATTTCTGCCGCAGTATCTGTTGGCTGCCTGTGTCGC
TGTCATTTCATGTTTACTCATATGATATGTATTGTACAAGGATGAGGGTT
CTTCTCAAATATGTAGCCGCTGCAGGTGTTCAAGCTTGTGTCTTCGCTGG
ATGTATGAACCTACCCCCGTTATTTTGCTACTGCTTGTAATGCCGTCAAG
ACAAAAGAAAGGGCTACTGATTCTTTGCCGTTATCACACGACGATACTGC
CCGGCAGCAGCAATTTTCTCAGTGTCCCCCCCCGTTCCAACTCCCTTCCG
TTGCCCATTCGTTTCCTGTTGCGAATAACCACGTTTAGCTCAACCGCCCC
ATTACCAATGGCGCCCTCTTCTACTACATTTCAAATGCTCAACGCCGGCT
AGTTCAAGCGATGTTGAAAGACATAGAGCCTGGGGATGCAAACCCAGCAA
GCGGTGATATTATTGACGATGCGGCGACAGGCGCCGAAATCCCCGACGAT
GCCAATTTTGACAAGGTCTGCGGCTTGAGCAAGGGTGTCCTGTGCGAGAG
GGTTGCAGTGCCTGGGAGCAAAACAGGATCTACAGTGTCTTCGCCAAAGA
TGGCGGAGATGAGCCATCTGCAAGAGGCCGCTGTACATCTTGAAGACCTT
CACGAAGTAGTGAACAAGTGCGTGACTTTCCTAGTGTGTATATTCTGCGA
ATGGCGAAGTGGTGGTCTGGTATTCCAAGCGTAACTGATCTCTTTTGGAT
GTCGAGCTGGCACACTTCACACTGTCGTCGGAAACCACGGTCGTGGGTGT
CCAGCTCTTGGTTTCATGTTCGGTGTTGTACGCTGCAAGATGTTCTTCGT
AGTACTCAAGATGAAGGTCAGAGTTGATTTAGTTGGTGTATGTGAACACT
TCCTTTATCGCGTGCCCGGTTCAGGTATATCGCATGCAGGATGTCACGTC
ACTCTCTGAGTTCAGTTCATCGTCACTCCAGCAATATAAAGTTTGTTCGC
ATCTTCGAGAATTCGAACCATATTCGCAGCTTTCTCGTCTTCCCAGATCG
GGTGTTGATCGGTGCCCCTCTCCATCCTGTCCTTGCGCGATACCGATGCA
CCGCTTTCCGGGCCTTCCTCGCTGACATATAAGGGCGGGAATCCAAACGG
GTATCGGCGGTTTCATAATCAACAGGTGGGTCCACGAGTCTACGTGTGTT
TCTATGGAAGTGATTTTCTAGCTGCCTCTCCCACTCCTCTCGTCCCCTGG
GTTTTAGTTGTGTCTGCATTGGTGTGCGTGATCGAAACATTGGGGACGGT
GGTAAGGCGTTGTTTCGTAATACACCTAGCAAATAGCCCGGTTGTAATTA
GATGTAATGGCACGCAGCAGTTAATATTTCTCCATTGAACGATCTACACT
GATTTCACGTAAAATGTTATCCATTTTGCTCCCGTGTTGGTTGCGCTTTG
CAGCGGCCTCGTCAAGCTGAAGGAAGCACAGCAGGATCAGCTCGGGGCCA
TGGAAAATATCGCGCGATGCGTTGATATACTCGTACGCTTCCCAGGGTTG
TGCAACATGCGCATGGCGTGAGTCCCTTGACACCGTACTGTCTCTCGATC
CGCCTGTGATTCTAACTGTGGATTCAGACCGATTAGCATATTGAAAGAGT
AAGAAACGTCGACTGATCAATCACAGCCAACGGCTGTGTCTGAAGGTGAT
TACATCTATAACCTAACAATGTTTGTTCCCTCCGTACGCCTGGCTTATTT
TGCGTCTCCCAGGTTGAGTCATCTTGTTGACAATAGATTCGGAATTTGTT
ATAATACAGCGTGCGCTAAAGAGGTTCGAAGTTCCAGTGTTTAGTGGCTC
AAGTATTTGTATTTGGTGGTTTGATGCAGGCCCCAATTCGGGACTCACAG
GATTTTGGCATGGTTAACTTCTAAGTCGTCGTGTGCGCATACGTTGTGCA
TCGGTGTGGGTCTTCACTTGCATTGATTAGCTGCGAGCAAAGAGTCTGCC
AAATTGTCTTGGTACATACGACCGGCTTGTCTGCGACGAAAAACGTGTCC
CAGCTTGTCCTCTTTACCAGTCATGAATGCAATTGCTTGCTGGGCCCTGT
CCTCACTGTATCCTCCTTGCTCGAAAAAAAGTGAAACCATCGATATGCCC
CTCCCCATGCTCTGCTTTTTGTGTGTCATATGTGTTTCTCCGACTGCGCA
AAGCATGCATTCCATACATTGTATCACACTGTCACTGGCAGCTGCTGAAG
AGCGAGAGACATACCGCCAGCTTGCTGATGCCTTCAACGCTGTCCGATTT
CCAGGAACCCAACCGATTCCACCCATTGAGGAGCGGTTGACGAACGATCT
TTGCGATGATATCATGTGCAGGTGTGCGTGCGCTAATATGTGTTCATTTC
GATGTCTGATTGGGGTGAGCCTTCGTGGTCAAAGCCAAGATAGTAGCAAC
TTGTATCTTGAGTAAATTGAAGTAAAATGTACCCACGTTCGCATTGGTTC
CCCGTGCATCCATACATTACTAGATATTCTGCGAAGAGTTGTACCGATCG
TTTGATTTTTAGGGCTTGGGCTTATGAAGGCGATGTAGCAGGCCTATACG
TTCGTGCGTCCTTATCGATTGTGAGACTTAGTAGGACCGAGGGTTGCGGG
TACGGTAGGCACCACAACATAGGCCTACTCAGCTGCACGTGTTGACTTGT
AGGTACATTTTTGTATCCACATGCATTTGGGCTTGGGATCAACCGGGTTC
TCCATTTGACAGCATTGAATAGTACCACGTCGCACGGCAGAAGCGGTTTG
ATACTCGGGTTGAATCTATGGCAGTATCCTTTCAAAAATTCCTGCCTGCT
GCTCCTCTGTCGAATCCTCCCTTTCTTTTGAGGGCACTGAGATCAACCGT
TCATCCGCCGATCATAACATTCTTTTACTTGCAGTTGGATGCAGAAATCC
ATCAAGATGCCCCAGGCCGTAAGGTACATGATTACCAAATCACCTGGCGA
TGGAGTGTCTGCTGACAATGTATCAGCAGCCGCATTACAGGACGTGGTAG
ATTGCGCGCTGCCAGAAGAATTTTGCAACCTCCACGCGATGCGCTCGCAG
CCGAACACTCATGTCTTGGTTGAAGACGGCGCCGAAATTACTCAAGAGCT
CGCAGACCTAGCGCTGGTGCAATGGCCCGACTGTTCGGGAAATGTTGCGA
CCGCTCCCCCTTCGGTCGACACTTCCAGCGGTTTTGGAGGCAGCGATTTA
GATCACGCGAGATGTGAAGCGACAGATGAAGACCTGGCTACGGAAGACTG
GTTGGGTGTCGCCGAAGCTTTACTAACGGGGGCAACTACTGAGGACGGTA
CAGGGGTGGGGGGAACCCTTGCTTGATCATCGCTCTGGAATATGCTGTAA
ATAATGAACCTCCCTGCGCTGAAAATAGCTGCACTTCGCAGGTTGAAAAC
TGGCGGAGTCGGGTACATCAAGGGTCCTCTGCTGCAACGCTTGAACAACA
TTTTACTTTCCTTAGATATATTCGATGCCAAACATTAAAACCTCCGTTCG
CACCGATCAGTAGATTTAAATTTTGGATGATATCGTCTTGCTCTCCGAAC
AGGATAGTGTTGTGCACTCGGAGCCGGTCGGCAAATGCACGGATGATTAG
TTAGCCAGCTTGAGCTGGCGTGCCTCGAGTGGACTGGGACGATCAAGAAA
ACTTAACCCAGTCGGCCAATGATTCTACTAAAACGCTTAATCTGTCGGTA
AATGAATAGAGAGGCAGCCCCATGATCAGGCTCGTAGTTGTGACCACGAG
AAAAGGAGAAGGAAGGTGTTGAATGGATGAAAACATTCTTGGTGGGTAGA
GGTAGGTGTCGTGAAGAGTATGATGTTGACATTCCCTGTTATGACAAGTG
CACTCTTCTGCCAAGCTCTTCCCGTCACCGTTGTTGTTCAAAAATGGATT
TGTTGTACCCTTGTCTGCTGCGGAACCCGAAAACCTATAGCACTGGTTGA
CGATACTTGCAGGTTGACTTCTTGCGATTCTGATCCTATCAGACGTTGAT
TGAATGAATAGGGTCATGCTTTGATTTTTTGTGTACTTCAAAGGGCAAGA
AGACCCAGCGCCCATAATATCCTGACGAACAGATGCAACAAAAAGTATTT
CGAACACTCATTGTTGTGTTCATCTGTAGAGAGATCGACCGACCTCTGGA
GGAGAGGTTCTCCCGCGGTACGTAGGGGAAAACTTCTCACGCTGTAGCAT
CGCTAGTTTTGTGTATCTGCCTCCCGACAGCCTAAAAAACAGTTCCACAT
TTGGCTATATAAGTGGGCATTTGGGATTTCTGGAGTTCGACAACCATGAA
GTTTGTTTCGATTTGATTAATCAACTAGGATTGAAAGTATGCTCCTCATT
TCCCTAATTCATTTCCGCAGGAAGTGGTCGTAGGAGCGCTTGACTATGTA
TAACAACGCATGATAAATTTAACGTTTCTCCTAAAGGTTACATGCAAATT
TTGGATGCTGGTATCAGGCCCCGAGAAGTACACGACTTTTGTCTGGAAGC
ACTCTCCGCAGCTACCAGCTGGTTTGAGGAAAAGTTTATCGTATCGTATG
TCTTCTCCGCGTAGTGTGATATAACGC back to topCoding sequence (CDS) from alignment at H-paniculata_contig3462:9810..16336- >mRNA_H-paniculata_contig3462.9238.1 ID=mRNA_H-paniculata_contig3462.9238.1|Name=mRNA_H-paniculata_contig3462.9238.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=2046bp|location=Sequence derived from alignment at H-paniculata_contig3462:9810..16336- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGTTGAAAGACATAGAGCCTGGGGATGCAAACCCAGCAAGCGGTGATAT
TATTGACGATGCGGCGACAGGCGCCGAAATCCCCGACGATGCCAATTTTG
ACAAGGTCTGCGGCTTGAGCAAGGGTGTCCTGTGCGAGAGGGTTGCAGTG
CCTGGGAGCAAAACAGGATCTACAGTGTCTTCGCCAAAGATGGCGGAGAT
GAGCCATCTGCAAGAGGCCGCTGTACATCTTGAAGACCTTCACGAAGTAG
TGAACAAATGTTGAAAGACATAGAGCCTGGGGATGCAAACCCAGCAAGCG
GTGATATTATTGACGATGCGGCGACAGGCGCCGAAATCCCCGACGATGCC
AATTTTGACAAGGTCTGCGGCTTGAGCAAGGGTGTCCTGTGCGAGAGGGT
TGCAGTGCCTGGGAGCAAAACAGGATCTACAGTGTCTTCGCCAAAGATGG
CGGAGATGAGCCATCTGCAAGAGGCCGCTGTACATCTTGAAGACCTTCAC
GAAGTAGTGAACAAGGCGGGAATCCAAACGGGTATCGGCGGTTTCATAAT
CAACAGGGCGGGAATCCAAACGGGTATCGGCGGTTTCATAATCAACAGCG
GCCTCGTCAAGCTGAAGGAAGCACAGCAGGATCAGCTCGGGGCCATGGAA
AATATCGCGCGATGCGTTGATATACTCGTACGCTTCCCAGGGTTGTGCAA
CATGCGCATGGCCGGCCTCGTCAAGCTGAAGGAAGCACAGCAGGATCAGC
TCGGGGCCATGGAAAATATCGCGCGATGCGTTGATATACTCGTACGCTTC
CCAGGGTTGTGCAACATGCGCATGGCCATGCATTCCATACATTGTATCAC
ACTGTCACTGGCAGCTGCTGAAGAGCGAGAGACATACCGCCAGCTTGCTG
ATGCCTTCAACGCTGTCCGATTTCCAGGAACCCAACCGATTCCACCCATT
GAGGAGCGGTTGACGAACGATCTTTGCGATGATATCATGTGCAGCATGCA
TTCCATACATTGTATCACACTGTCACTGGCAGCTGCTGAAGAGCGAGAGA
CATACCGCCAGCTTGCTGATGCCTTCAACGCTGTCCGATTTCCAGGAACC
CAACCGATTCCACCCATTGAGGAGCGGTTGACGAACGATCTTTGCGATGA
TATCATGTGCAGTTGGATGCAGAAATCCATCAAGATGCCCCAGGCCGTAA
GGTACATGATTACCAAATCACCTGGCGATGGAGTGTCTGCTGACAATGTA
TCAGCAGCCGCATTACAGGACGTGGTAGATTGCGCGCTGCCAGAAGAATT
TTGCAACCTCCACGCGATGCGCTCGCAGCCGAACACTCATGTCTTGGTTG
AAGACGGCGCCGAAATTACTCAAGAGCTCGCAGACCTAGCGCTGGTGCAA
TGGCCCGACTGTTCGGGAAATGTTGCGACCGCTCCCCCTTCGGTCGACAC
TTCCAGCGGTTTTGGAGGCAGCGATTTAGATCACGCGAGATGTGAAGCGA
CAGATGAAGACCTGGCTACGGAAGACTGGTTGGGTGTCGCCGAAGCTTTA
CTAACGGGGGCAACTACTGAGGACGGTACAGGGGTGGGGGGAACCCTTGC
TTGATTGGATGCAGAAATCCATCAAGATGCCCCAGGCCGTAAGGTACATG
ATTACCAAATCACCTGGCGATGGAGTGTCTGCTGACAATGTATCAGCAGC
CGCATTACAGGACGTGGTAGATTGCGCGCTGCCAGAAGAATTTTGCAACC
TCCACGCGATGCGCTCGCAGCCGAACACTCATGTCTTGGTTGAAGACGGC
GCCGAAATTACTCAAGAGCTCGCAGACCTAGCGCTGGTGCAATGGCCCGA
CTGTTCGGGAAATGTTGCGACCGCTCCCCCTTCGGTCGACACTTCCAGCG
GTTTTGGAGGCAGCGATTTAGATCACGCGAGATGTGAAGCGACAGATGAA
GACCTGGCTACGGAAGACTGGTTGGGTGTCGCCGAAGCTTTACTAACGGG
GGCAACTACTGAGGACGGTACAGGGGTGGGGGGAACCCTTGCTTGA back to top
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