mRNA_H-paniculata_contig34528.9211.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig34528.9211.1 vs. uniprot
Match: A0A8J5GP83_ZINOF (Integrase catalytic domain-containing protein n=1 Tax=Zingiber officinale TaxID=94328 RepID=A0A8J5GP83_ZINOF) HSP 1 Score: 232 bits (592), Expect = 4.950e-65 Identity = 146/412 (35.44%), Postives = 216/412 (52.43%), Query Frame = 1
Query: 4 IESGCTGHDLTAQRDLFQNVPQVVRSPIATAGKGELGVEGQGVVEGSIWTAERARRIIFCSVFHVPEALDSILSVERMVSQGMEANFDSERRQLY--CNGITIPFEHTSRKEYSLRMINTEKRQHVVD----TKLLHERLGHVRDLPTVARQQ--------GIRLSGKLGVCSVYEKGKTSKQPVNRYREERTTEPLELVHTDIAGPV-VKSFGECRFAIIFVDDYSRMRKVCTLRQKSEALWALKQFERDVARAKGL*IKRLWSDQGGEYTGKAFR*FCAENGIKQEFSAAYTPHQDGVAERSWRSIFNMARATMITVNMGHRYWAEAVRSAVYCLNRAPTRPHNGGTPYEKWHGKTVK*DNLRVFGCTAYVMFQSQQRRKLDDKV*AGVFLGYDEDSPSYRIYNPENKSI 1194
++SGC+ H +T RD F + + S I +G+G + ++ T E ++I V +VPE ++LSV +++ + FD R Q++ N + + K +SL M E R VD + L H R GH+ D + ++ I SGK+ VY GK K P + + + PLELVH+DI GP+ + G R+ I+F+DDY+RM + L QKSEA QF+ R G IK L +D+GGEY F +C NGIK++ + +YTP Q+GVAER R+I MAR + + + YWAEAV +A Y +NR+PT+ + TPYE WH K D+ ++FG AY + SQ+R K D K +F+GY +S YR+ +P I
Sbjct: 319 LDSGCSNH-MTGNRDTFVKLDPNITSQIILGDGSRKSGKGKGDI--AVQTKEGKEKLI-TDVLYVPELSHNLLSVGQLMEKNFSFLFDDGRCQIFDKTNKVIVTNIEMKNKTFSLTMPLVEDRALKVDNAELSSLWHLRYGHLHDRALILLKEKNMVIGLPSIEPSGKVCEGCVY--GKMHKLPFPKTSWQAKS-PLELVHSDICGPMQTPTPGRKRYFILFIDDYTRMMWIYFLNQKSEAFSTFMQFKAQAERESGFLIKSLRTDRGGEYLSNPFSEYCKANGIKRQLTTSYTPQQNGVAERKNRTIVEMARNMLKYKGIPNLYWAEAVHTAAYIMNRSPTKAVHNMTPYEAWHKKKPVVDHFKIFGSLAYALLPSQRREKFDSKGQKLIFIGYSNESKGYRLLDPSTLKI 723
BLAST of mRNA_H-paniculata_contig34528.9211.1 vs. uniprot
Match: A0A8J5F3N7_ZINOF (Integrase catalytic domain-containing protein n=1 Tax=Zingiber officinale TaxID=94328 RepID=A0A8J5F3N7_ZINOF) HSP 1 Score: 233 bits (594), Expect = 2.120e-64 Identity = 146/412 (35.44%), Postives = 217/412 (52.67%), Query Frame = 1
Query: 4 IESGCTGHDLTAQRDLFQNVPQVVRSPIATAGKGELGVEGQGVVEGSIWTAERARRIIFCSVFHVPEALDSILSVERMVSQGMEANFDSERRQLY--CNGITIPFEHTSRKEYSLRMINTEKRQHVVD----TKLLHERLGHVRDLPTVARQQ--------GIRLSGKLGVCSVYEKGKTSKQPVNRYREERTTEPLELVHTDIAGPV-VKSFGECRFAIIFVDDYSRMRKVCTLRQKSEALWALKQFERDVARAKGL*IKRLWSDQGGEYTGKAFR*FCAENGIKQEFSAAYTPHQDGVAERSWRSIFNMARATMITVNMGHRYWAEAVRSAVYCLNRAPTRPHNGGTPYEKWHGKTVK*DNLRVFGCTAYVMFQSQQRRKLDDKV*AGVFLGYDEDSPSYRIYNPENKSI 1194
++SGC+ H +T RD F + + S I +G+G + ++ T E ++I V +VPE ++LSV +++ + FD R Q++ N + + K +SL M E R VD + L H R GH+ D + ++ I SGK+ VY GK K P + + + PLELVH+DI GP+ + G R+ I+F+DDY+RM + L QKSEA QF+ R G IK L +D+GGEY F +C NGIK++ + +YTP Q+GVAER R+I MAR+ + + + YWAEAV +A Y +NR+PT+ + TPYE WH K D+ ++FG AY + SQ+R K D K +F+GY +S YR+ +P I
Sbjct: 289 LDSGCSNH-MTGNRDTFVKLDPNITSQIILGDGSRKSGKGKGDI--AVQTKEGKEKLI-TDVLYVPELSHNLLSVGQLMEKNFSFLFDDGRCQIFDKTNKVIVTNIEMKNKTFSLTMPLVEDRALKVDNAELSSLWHLRYGHLHDRALILLKEKNMVIGLPSIEPSGKVCEGCVY--GKMHKLPFPKTSWQAKS-PLELVHSDICGPMQTPTPGRKRYFILFIDDYTRMMWIYFLNQKSEAFSTFMQFKAQAERESGFLIKSLRTDRGGEYLSNPFSEYCKANGIKRQLTTSYTPQQNGVAERKNRTIVEMARSMLKYKGIPNLYWAEAVHTAAYIMNRSPTKAVHNMTPYEAWHKKKPVVDHFKIFGSLAYALLPSQRREKFDSKGQKLIFIGYSNESKGYRLLDPSTFKI 693
BLAST of mRNA_H-paniculata_contig34528.9211.1 vs. uniprot
Match: A0A2H9ZU53_9ASPA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Apostasia shenzhenica TaxID=1088818 RepID=A0A2H9ZU53_9ASPA) HSP 1 Score: 222 bits (566), Expect = 2.640e-64 Identity = 140/403 (34.74%), Postives = 226/403 (56.08%), Query Frame = 1
Query: 31 LTAQRDLFQNVPQVVRSPIATAGKGELGVEGQGVVEGSIWTAERARRIIFCSVFHVPEALDSILSVERMVSQGMEANFDSERRQLY----CNGITIPFEHTSRKEYSLRMINTEKRQHVV----DTKLLHERLGH--VRDLPTVARQQGI----RLSGKLGVCSVYEKGKTSKQPVNRYREERTTEPLELVHTDIAGPV-VKSFGECRFAIIFVDDYSRMRKVCTLRQKSEALWALKQFERDVARAKGL*IKRLWSDQGGEYTGKAFR*FCAENGIKQEFSAAYTPHQDGVAERSWRSIFNMARATMITVNMGHRYWAEAVRSAVYCLNRAPTRPHNGGTPYEKWHGKTVK*DNLRVFGCTAYVMFQSQQRRKLDDKV*AGVFLGYDEDSPSYRIYNPENKSI 1194
+++ R +FQ++ + + + ++ VEG+G + I TA+ + + +VF VP+ ++LSV ++V+ G FD+ ++ C I + TS + LR+ + +V ++ L H R GH + L + ++ + +++ +C GK S++ R R T PLELV++D+ GP+ ++S R+ I+F+DDY+RM V L+ KSEAL A K F+ V R G IK L +D+GGE+ F+ FC ENGI +E +A YTP Q+GVAER R+I MAR+ + + +++WAE+V +AVY LN +PT+ T YE W G+ + +L++FGC AYV S R KL+DK +F+GY S +YR+YNP +K +
Sbjct: 1 MSSVRSMFQDLDESQKLQVRLGDDKQVEVEGKGTLV--IKTAQGNTKHLD-NVFFVPKLAHNLLSVGQLVASGYSILFDNATCKIKDKESCQ-IIADIQMTSNNMFPLRISSIGNHALIVKKMNESTLWHFRYGHLHINGLKLLNQKNMVIGLPKINDLENICEECLYGKQSRKSFLIGRTCRATHPLELVYSDLCGPMRIESLSGSRYFILFIDDYTRMNWVYFLKNKSEALEAFKIFKAFVERQSGYFIKVLRTDRGGEFLSHEFKAFCEENGIHRELTAPYTPEQNGVAERKNRTIVEMARSLLKAKGIPNQFWAESVATAVYLLNISPTKAILNRTLYEVWKGRKSRISHLKIFGCIAYVYVNSHDRHKLEDKSEKCIFIGYCPQSKAYRLYNPCSKKL 399
BLAST of mRNA_H-paniculata_contig34528.9211.1 vs. uniprot
Match: A0A2Z7BCE9_9LAMI (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Dorcoceras hygrometricum TaxID=472368 RepID=A0A2Z7BCE9_9LAMI) HSP 1 Score: 227 bits (578), Expect = 3.520e-64 Identity = 137/412 (33.25%), Postives = 220/412 (53.40%), Query Frame = 1
Query: 4 IESGCTGHDLTAQRDLFQNVPQVVRSPIATAGKGELGVEGQGVVE-GSIWTAERARRIIFCSVFHVPEALDSILSVERMVSQGMEANFDSER---RQLYCNGITIPFEHTSRKEYSLRMINTEKRQHVVDTK----LLHERLGHVRD--LPTVARQQGIRLSGKL----GVCSVYEKGKTSKQPVNRYREERTTEPLELVHTDIAGPV-VKSFGECRFAIIFVDDYSRMRKVCTLRQKSEALWALKQFERDVARAKGL*IKRLWSDQGGEYTGKAFR*FCAENGIKQEFSAAYTPHQDGVAERSWRSIFNMARATMITVNMGHRYWAEAVRSAVYCLNRAPTRPHNGGTPYEKWHGKTVK*DNLRVFGCTAYVMFQSQQRRKLDDKV*AGVFLGYDEDSPSYRIYNPENKSI 1194
I+SGC+ H +T +++F+ + + R I ++ VEG+G VE S++ + + +V + PE ++ SV +++ G FD + + + L E V TK L H R GH+ L + +++ +R ++ VC GK SK+ + R TEPLELVH D+ GP+ ++ G ++ ++FVDDYSRM V L+ KSEA +F+ V + KG +K L +D+GGE+T F +C ++GI +E +A YTP Q+GVAER R+I MAR+ + + + + +WAEAV +AVY +N +PT+ TPYE W GK ++L++FGC YV+ + +R KL++K +F+GY S +YR+YNP +
Sbjct: 158 IDSGCSNH-MTGMKEMFRELDETQRRVIRLGNNKQIQVEGKGTVEVQSVFGKSK----LISNVLYTPELAHNLFSVGQLLLSGFTILFDESHCIITEKATGHVLAKVNMAENHMFPLVFSKLESHAMVTMTKNASQLWHLRYGHLHTAGLRLLNQKEMVRGLPRIDVDGAVCEGCMYGKQSKRSFPVGQSWRATEPLELVHADLCGPMRTETLGGSKYFLLFVDDYSRMSWVYFLKFKSEAFGQFFKFKALVEKQKGSNLKILRTDRGGEFTSMEFNQYCEKHGIHKELTAPYTPEQNGVAERKNRTIVEMARSMLKSKGLPYNFWAEAVTTAVYLINLSPTKAVMNKTPYEAWSGKRPSVEHLKIFGCIVYVLINANERHKLEEKSIKCIFIGYCSQSKAYRVYNPATGKV 564
BLAST of mRNA_H-paniculata_contig34528.9211.1 vs. uniprot
Match: A0A151T355_CAJCA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=2 Tax=Cajanus cajan TaxID=3821 RepID=A0A151T355_CAJCA) HSP 1 Score: 232 bits (592), Expect = 3.560e-64 Identity = 148/414 (35.75%), Postives = 218/414 (52.66%), Query Frame = 1
Query: 1 IIESGCTGHDLTAQRDLFQNVPQVVRSPIATAGKGE-LGVEGQGVVEGSIWTAERARRIIFCSVFHVPEALDSILSVERMVSQGMEANFDSERRQLY----CNGITIPFEHTSRKEYSLRMINTEKRQH---VVDTKLLHERLGHVRDLPTVARQQGIRLSGKL-------GVCSVYEKGKTSKQPVNRYREERTTEPLELVHTDIAGPV-VKSFGECRFAIIFVDDYSRMRKVCTLRQKSEALWALKQFERDVARAKGL*IKRLWSDQGGEYTGKAFR*FCAENGIKQEFSAAYTPHQDGVAERSWRSIFNMARATMITVNMGHRYWAEAVRSAVYCLNRAPTRPHNGGTPYEKWHGKTVK*DNLRVFGCTAYVMFQSQQRRKLDDKV*AGVFLGYDEDSPSYRIYNPENKSI 1194
+I+SGCT H +T +F+ + S + T G GE + V+G+GVV ++ T + I V VPE ++LSV +M+ + +F+ + ++ C +TI K + + T V D+ L H+RLGH T+ R L L +C V + GK K P + R TE L+LVHTD+ GP+ S ++ ++F+DDY+RM V L++KS+ +F+ V GL +KRL SD G EYT F+ FC + GI+ + + YTP Q+GV+ER R++ MAR + + +WAEAV ++VY LN PT+ G TP+E WHG+T ++L+VFGC Y + +R KLD K G+FLGY S YRIYNP K I
Sbjct: 267 LIDSGCTNH-MTHDASIFKELDLSYLSKV-TIGNGECVDVKGKGVV--AVETPSGTKYIY--DVLFVPEINLNLLSVGQMLEKNYVLHFEDMKCKIIDPSGCELMTIRMRD---KSFPIEWKQTAMHAFPSAVNDSFLWHKRLGHF-SYSTLKRMSSNDLVKNLPAIQDNANLCDVCQYGKQRKLPFPKEASWRATEKLQLVHTDVCGPMSTTSLNGSKYFLLFIDDYTRMSWVFFLKKKSDVFANFLKFKFMVENETGLQVKRLRSDNGTEYTAGEFKKFCEQVGIQHQLTVPYTPQQNGVSERKNRTVMEMARCLLFEKGLPKTFWAEAVNTSVYLLNLLPTKALKGNTPFEAWHGRTPSVEHLKVFGCVCYALVPEVKRDKLDQKSEVGIFLGYSSYSKGYRIYNPATKKI 670
BLAST of mRNA_H-paniculata_contig34528.9211.1 vs. uniprot
Match: A0A151R9Q4_CAJCA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Cajanus cajan TaxID=3821 RepID=A0A151R9Q4_CAJCA) HSP 1 Score: 224 bits (571), Expect = 4.540e-64 Identity = 140/423 (33.10%), Postives = 225/423 (53.19%), Query Frame = 1
Query: 1 IIESGCTGHDLTAQRDLFQNVPQVVRSPIATAGKGE-LGVEGQGVVEGSIWTAERARRIIFCSVFHVPEALDSILSVERMVSQGMEANFDSERRQLY----CNGITIPFEHTSRKEYSLRMINTEKRQH-----VVDTKLLHERLGH--------------VRDLPTVARQQGIRLSGKLGVCSVYEKGKTSKQPVNRYREERTTEPLELVHTDIAGPV-VKSFGECRFAIIFVDDYSRMRKVCTLRQKSEALWALKQFERDVARAKGL*IKRLWSDQGGEYTGKAFR*FCAENGIKQEFSAAYTPHQDGVAERSWRSIFNMARATMITVNMGHRYWAEAVRSAVYCLNRAPTRPHNGGTPYEKWHGKTVK*DNLRVFGCTAYVMFQSQQRRKLDDKV*AGVFLGYDEDSPSYRIYNPENKSI 1194
+I+SGCT H +T +F+ + Q S + T G GE + V+G+GV+ ++ T+ + I V +VPE ++LSV +M+ + +F+ + ++ C ++I K+ S + + H V D+ L H+RLGH +++LP++ + VC V + GK + P R E L+L+HTD+ GP+ + S ++ ++F+DD++RM V L+QK + A ++F+ V G IK+L SD G EYT F+ FC + GI+ +F+ YTP Q+GV+ER R++ MAR + + +WAEAV ++VY LN PT+ G TPYE W G+ ++L++FGC Y + +R KLD K G+FLGY ++ YR+YN E K I
Sbjct: 120 LIDSGCTNH-MTNDASIFKELDQSHFSKV-TVGNGESVEVKGKGVI--AVETSSGTKYI--SDVLYVPEINQNLLSVGQMLEKNYTLHFEDMKCTIFDPSGCELMSIRM-----KDKSFPIEWKQPAMHAFPSSVDDSVLWHKRLGHFSYSTLKKISSNGLIQNLPSI--------EDDVDVCDVCQFGKQCRLPFPAVASWRAVEKLQLIHTDVCGPMSIASLNGNKYFLLFIDDFTRMSWVFFLKQKLDVFAAFQKFKTLVENEAGCQIKKLRSDNGTEYTAGEFKKFCDQAGIQHQFTVPYTPQQNGVSERKNRTVMEMARCLLFEKGLPKTFWAEAVNTSVYLLNLLPTKALKGKTPYEAWCGRKPSVEHLKIFGCVCYTHVPNVKRDKLDHKCEVGIFLGYSINTKGYRVYNLETKKI 523
BLAST of mRNA_H-paniculata_contig34528.9211.1 vs. uniprot
Match: A0A251SKN6_HELAN (Putative zinc finger, CCHC-type n=1 Tax=Helianthus annuus TaxID=4232 RepID=A0A251SKN6_HELAN) HSP 1 Score: 230 bits (587), Expect = 2.120e-63 Identity = 147/410 (35.85%), Postives = 222/410 (54.15%), Query Frame = 1
Query: 4 IESGCTGHDLTAQRDLFQNVPQVVRSPIATAGKGELGVEGQGVVEGSIWTAERARRIIFCSVFHVPEALDSILSVERMVSQGMEANFDSERRQLYC--NGITIPFEHTSRKEYSLRM---INTEKRQHVVDTKLL-HERLGHVR-DLPTVARQQGI-----RLSGKLGVCSVYEKGKTSKQPVNRYREERTTEPLELVHTDIAGPV-VKSFGECRFAIIFVDDYSRMRKVCTLRQKSEALWALKQFERDVARAKGL*IKRLWSDQGGEYTGKAFR*FCAENGIKQEFSAAYTPHQDGVAERSWRSIFNMARATMITVNMGHRYWAEAVRSAVYCLNRAPTRPHNGGTPYEKWHGKTVK*DNLRVFGCTAYVMFQSQQRRKLDDKV*AGVFLGYDEDSPSYRIYNPENKSI 1194
++SGC+ H +T RDLF N+ + ++ + T L V G G V SI R R+I +VF+V ++LSV +++++G F +R + N + TS K + L + IN DT +L H+R GHV D +G+ ++ + +C GK +K+ R + ++PL+LVH+DI GP+ +S G CR+ I F+DDY+R V L+ KSEAL K+F+ + IK L SD+GGEY F+ + NGI+ + + +Y+P Q+GVAER R++ ++R+ M + YWAEAV A Y LNR T+ TPYE W+G ++L+VFGC AYV Q+R KLD K VF+GY E+S Y++YNP++ I
Sbjct: 1056 LDSGCSNH-MTGNRDLFINLDESLKKEVRTGDDKRLDVIGSGEVSVSI--KGRTRKIP--NVFYVKGLKHNLLSVGQLINKGYAILFQKDRCIIKDAENEVIGKIRMTSNKMFPLHLDSDINLAMTMTTKDTTILWHKRYGHVNVDTLISMENKGLVFGLPKIMKRESLCEGCISGKQTKKTFPRKAIWQASKPLQLVHSDICGPMRTESIGGCRYFITFIDDYTRKSWVYFLKYKSEALSYFKRFKALNEKQSDHLIKTLRSDRGGEYCSNEFQEYLKVNGIRHQLTNSYSPQQNGVAERKNRTLMELSRSMMNAKELPTCYWAEAVACATYILNRTVTKTRPNITPYEAWNGNKPNVEHLKVFGCLAYVHIPKQRRDKLDKKTEKTVFVGYSENSKGYKLYNPQSNKI 1460
BLAST of mRNA_H-paniculata_contig34528.9211.1 vs. uniprot
Match: A0A6D2IM54_9BRAS (Uncharacterized protein n=2 Tax=Microthlaspi erraticum TaxID=1685480 RepID=A0A6D2IM54_9BRAS) HSP 1 Score: 228 bits (581), Expect = 1.170e-62 Identity = 144/437 (32.95%), Postives = 229/437 (52.40%), Query Frame = 1
Query: 4 IESGCTGHDLTAQRDLFQNVPQVVRSPIATAGKGELGVEGQG----VVEGSIWTAERARRIIFCSVFHVPEALDSILSVERMVSQGMEANFDSERRQLYCNGITIPFEHTSRKEYSLRMINTEKRQHVV--------DTK-------------LLHERLGH--------------VRDLPTVARQQGIRLSGKLGVCSVYEKGKTSKQPVNRYREERTTEPLELVHTDIAGPVVK-SFGECRFAIIFVDDYSRMRKVCTLRQKSEALWALKQFERDVARAKGL*IKRLWSDQGGEYTGKAFR*FCAENGIKQEFSAAYTPHQDGVAERSWRSIFNMARATMITVNMGHRYWAEAVRSAVYCLNRAPTRPHNGGTPYEKWHGKTVK*DNLRVFGCTAYVMFQSQQRRKLDDKV*AGVFLGYDEDSPSYRIYNPENKSI 1194
++SGC+ H + R+ F + + R + + VEG+G + G+I + SV++VP +++S+ ++ +G+ D + +++ H ++ +R + ++ R VV DT+ L H+RLGH V LP ++ +G G+C + +GK +++ + + R + L+LVHTDI GP+ S R+ I F+DDYSR L +KSEAL A K+F+ R GL + L SD+GGEY AF+ +C ENGIK++ +AAYTP Q+G+AER RSI NMAR M+ +++ R+W EAV+ AV+ LNR+P+ TP E+W +++RVFGC AY + ++R KLD+K VF+G ++S +YR+YNPE K I
Sbjct: 302 LDSGCSNH-MCGVREWFVDFDETFRQNVKLGDDRRMMVEGRGNLRLEINGTIQ--------LISSVYYVPGLKSNLMSIGQLQQKGLRIVIDEDVCEIW---------HKEQRRLLMRSVMSKNRLFVVLAAVKEARDTEEGCFQVTEEKMEDLWHKRLGHLSHSGMQSLVEKKMVNGLPQLSH------NGDGGLCDICMRGKQNRENIPKKSSWRASRALQLVHTDICGPIAPTSASGKRYIINFIDDYSRKCWSFLLAEKSEALRAFKEFKVAAEREMGLSLVSLRSDRGGEYNSAAFQDYCRENGIKRQLTAAYTPQQNGIAERKNRSIMNMARCMMLGMSVPRRFWPEAVQYAVHVLNRSPSAALGDVTPDERWSNHKPSVEHVRVFGCVAYALVPYERRVKLDEKSIQCVFVGVSKESKAYRLYNPETKKI 714
BLAST of mRNA_H-paniculata_contig34528.9211.1 vs. uniprot
Match: A0A251UIF2_HELAN (Integrase catalytic domain-containing protein n=1 Tax=Helianthus annuus TaxID=4232 RepID=A0A251UIF2_HELAN) HSP 1 Score: 227 bits (578), Expect = 3.040e-62 Identity = 146/410 (35.61%), Postives = 223/410 (54.39%), Query Frame = 1
Query: 4 IESGCTGHDLTAQRDLFQNVPQVVRSPIATAGKGELGVEGQGVVEGSIWTAERARRIIFCSVFHVPEALDSILSVERMVSQGMEANFDSERRQLYC--NGITIPFEHTSRKEYSLRM---INTEKRQHVVDTKLL-HERLGHVR-DLPTVARQQGI-----RLSGKLGVCSVYEKGKTSKQPVNRYREERTTEPLELVHTDIAGPV-VKSFGECRFAIIFVDDYSRMRKVCTLRQKSEALWALKQFERDVARAKGL*IKRLWSDQGGEYTGKAFR*FCAENGIKQEFSAAYTPHQDGVAERSWRSIFNMARATMITVNMGHRYWAEAVRSAVYCLNRAPTRPHNGGTPYEKWHGKTVK*DNLRVFGCTAYVMFQSQQRRKLDDKV*AGVFLGYDEDSPSYRIYNPENKSI 1194
++SGC+ H +T RDLF N+ + ++ + T L V G G V SI R R+I +VF+V ++LSV +++++G F +R + + + TS K + L + IN DT +L H+R GHV D +G+ ++ + +C GK +K+ R + ++PL+LVH+DI GP+ +S G CR+ I F+DDY+R V L+ KSEAL K+F+ + IK L SD+GGEY AF+ + N I+ + + +Y+P Q+GVAER R++ ++R+ M + + YWAEAV A Y LNR T+ TPYE W+G ++L+VFGC AYV Q+R KLD K VF+GY E+S Y++YNP++ I
Sbjct: 304 LDSGCSNH-MTGNRDLFINLDESLKKEVRTGDDKRLEVIGSGEVSVSI--KGRTRKIP--NVFYVKGLKHNLLSVGQLINKGYTILFQKDRCIIKDAESEVIGEIRMTSNKMFPLHLDSDINFAMTMTTKDTSILWHKRYGHVNVDTLINMENKGLVFGLPKIMKQESLCEGCISGKQTKKTFPRKAMWQASKPLQLVHSDICGPMRTESIGGCRYFITFIDDYTRKSWVYFLKYKSEALNYFKRFKALNEKQSDHLIKTLRSDRGGEYCSNAFQEYLKVNCIRHQLTNSYSPQQNGVAERKNRTLMELSRSMMNAKELPNCYWAEAVACATYILNRTVTKTRPNITPYEAWNGNKPNVEHLKVFGCLAYVHIPKQRRDKLDKKTEKTVFVGYSENSKGYKLYNPQSNKI 708
BLAST of mRNA_H-paniculata_contig34528.9211.1 vs. uniprot
Match: A0A4Y1QWW3_PRUDU (Transposable element protein n=1 Tax=Prunus dulcis TaxID=3755 RepID=A0A4Y1QWW3_PRUDU) HSP 1 Score: 224 bits (572), Expect = 3.360e-62 Identity = 144/407 (35.38%), Postives = 219/407 (53.81%), Query Frame = 1
Query: 31 LTAQRDLFQNVPQVVRSPIATAGKGEL-GVEGQGVVEGSIWTAERARRIIFCSVFHVPEALDSILSVERMVSQGMEANFDSERRQLYC-------NGITIPFEHTSRKEYSLRMINTEK---RQHVVDTKLL-HERLGHV--RDLPTVARQQGI----RLSGKLGVCSVYEKGKTSKQPVNRYREERTTEPLELVHTDIAGPV-VKSFGECRFAIIFVDDYSRMRKVCTLRQKSEALWALKQFERDVARAKGL*IKRLWSDQGGEYTGKAFR*FCAENGIKQEFSAAYTPHQDGVAERSWRSIFNMARATMITVNMGHRYWAEAVRSAVYCLNRAPTRPHNGGTPYEKWHGKTVK*DNLRVFGCTAYVMFQSQQRRKLDDKV*AGVFLGYDEDSPSYRIYNPENKSI 1194
+T + F + + V S + G G+L VEG+G++ S+ T ++++ V +VP ++LSV +++ +G F+ + YC N + + T+ K + L M + E VD LL H R GH+ R L + ++ + + + +C GK + P ++ R PLELVH DI GP SF R+ I+FVDD+SRM V L QKSEA KQF+ G +K L +D+GGE+T F +C NGIK+E +A YTP Q+GVAER R+I MAR+ + ++ + +WAEA+ +AV+ LNR+PT+ TP+E WH K D ++FGCTAY SQ+R K D+K +F+GY + S +YR+ +P KS+
Sbjct: 1 MTGNKQCFVKLEEKVNSQVKL-GDGKLHNVEGKGII--SVQTKGGIPKLVY-DVLYVPNLAQNLLSVGQLLQRGFLVKFEDD----YCVISDKKNNTLVAKIKMTANKVFPLLMTSKENLALEAEKVDGSLLWHLRYGHLNQRSLQLLHQKSMVVGLPSIHSEKEICEGCIFGKFHRLPFSQ-SSWRAKAPLELVHADICGPTRTPSFNNKRYFILFVDDFSRMMWVYFLEQKSEAFSVFKQFKAFGENQSGHNLKVLRTDRGGEFTSNEFSEYCKSNGIKRELTARYTPQQNGVAERRNRTIVEMARSMLKAKSLPNTFWAEAIHTAVFILNRSPTKAVKDKTPFEAWHRFKPKVDFFKIFGCTAYAHIPSQKREKFDEKGEKYIFVGYSDQSKAYRLIDPRTKSL 398 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig34528.9211.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
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The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig34528.9211.1 >prot_H-paniculata_contig34528.9211.1 ID=prot_H-paniculata_contig34528.9211.1|Name=mRNA_H-paniculata_contig34528.9211.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=167bp MVSQGMEANFDSERRQLYCNGITIPFEHTSRKEYSLRMINTEKRQHVVDTback to top mRNA from alignment at H-paniculata_contig34528:510..1799- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig34528.9211.1 ID=mRNA_H-paniculata_contig34528.9211.1|Name=mRNA_H-paniculata_contig34528.9211.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=1290bp|location=Sequence derived from alignment at H-paniculata_contig34528:510..1799- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig34528:510..1799- >mRNA_H-paniculata_contig34528.9211.1 ID=mRNA_H-paniculata_contig34528.9211.1|Name=mRNA_H-paniculata_contig34528.9211.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1002bp|location=Sequence derived from alignment at H-paniculata_contig34528:510..1799- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |