prot_H-paniculata_contig3439.9176.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig3439.9176.1
Unique Nameprot_H-paniculata_contig3439.9176.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length1170
Homology
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BLAST of mRNA_H-paniculata_contig3439.9176.1 vs. uniprot
Match: D7FQN8_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FQN8_ECTSI)

HSP 1 Score: 226 bits (575), Expect = 2.770e-56
Identity = 129/215 (60.00%), Postives = 149/215 (69.30%), Query Frame = 0 
Query:    1 VSCLCAFRAAEEGVTLSRVLVVDIDSGRGVFGNSRASVITGDEENRLLKVWVAPTRFASSPSSXXXXXXXXXRGADGLEGLLPLQVLSLPGQGALSLEMDPRGDFVFAADAGEGLLYALHLGEGSY-GIRMDYLRPYALAHPVQSFVVLEQEPELEYGYDEQDSPSGDGRVLQLICVQTKPVQIYRISARDALPPPGLFLGNEMEPDGGRDRGAA 214
            ++CL AFRAA EG TLSRVLVVD D           +++TGDE+NRLLKVW AP     + +           GA  LEG+LP QVLSLPG+GALSLE+DP G+FVFAAD GEGLLYALHL +G   GI MDYLRPY+LAHPVQSF VL +EPE EYGY E   PS + R+LQL+C QTKPVQIYRI+ RDALPP G+F       D G D G A
Sbjct:  301 IACLRAFRAAPEGSTLSRVLVVDSDM----------ALVTGDEDNRLLKVWPAPEWNGGAGA-----------GAGALEGVLPSQVLSLPGRGALSLEVDPGGEFVFAADTGEGLLYALHLAQGGQKGICMDYLRPYSLAHPVQSFTVLSKEPEPEYGY-EDSPPSAEDRILQLVCAQTKPVQIYRIAVRDALPPAGVFA---KPADNGNDGGPA 490
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig3439.9176.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FQN8_ECTSI2.770e-5660.00Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig3439contigH-paniculata_contig3439:2973..17732 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig3439.9176.1mRNA_H-paniculata_contig3439.9176.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig3439 2973..17732 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig3439.9176.1 ID=prot_H-paniculata_contig3439.9176.1|Name=mRNA_H-paniculata_contig3439.9176.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=1170bp
VSCLCAFRAAEEGVTLSRVLVVDIDSGRGVFGNSRASVITGDEENRLLKV
WVAPTRFASSPSSSSTSAAGGGRGADGLEGLLPLQVLSLPGQGALSLEMD
PRGDFVFAADAGEGLLYALHLGEGSYGIRMDYLRPYALAHPVQSFVVLEQ
EPELEYGYDEQDSPSGDGRVLQLICVQTKPVQIYRISARDALPPPGLFLG
NEMEPDGGRDRGAASPVAIVTHGKGAQMMGSDSSAALSKEGGGSLGGAVA
ATNKTTPSRPALAASSVGSPQQQTRPPPSPITPAGDFTSTAGAGGTNSGA
GVMLGDGAGGGAGGGGARLRATPKTEKRRGEDNIMGNAAGGAVVESAHGS
PSAQESSAQSTPDSWVGASQDDWDQDGGNAVAVARASAAAAASKPTTAGG
DSLSETSSSGGGGDAPVPSLPRRAIPSLSPGPATAVAVSTALGISPRPSA
AARDGSGSVKGVSPRVVSRGGAAGGGGGGDAAVAAAAVEVRQMEVLPAMP
SAAPQERPASPEFRRFLTPHQVENFGTPASSSTASQSSRAPPFGAHNTSN
SPGAAGEEGGEAAAAGGRGGHDENAEEQSVSVSVSEERQEVGSTTREDAT
AAALIAATTATADGTSSSAGVGQATGTSAMFASSRGGESTDASYQDGREG
MGGGGGGIGSGSGGGAGAGEPSASGSGNNGGALGGSSAHGDASGGSSSTM
AMQQQQQQQQQPGREADNSAGGVPLSTGLSGALHLPPSPAAALSPTAGGE
ASRDPGAMQRTGRSIPGVTVDQSATLALRSLLMGGNSGGAGGGGGSSSLF
AGGGLAAPSSGLGGPGAPSSSSTAGLPRSVVVVEPDAEGAGAGNARPPAS
ASLSPSLAAAAASSSSKRPLASSTSSMSAYGSVVLATSTAAATMTTTAGG
SGVGGTVIPSPPSSPPLSSSKGSTMSSSSSSSLSSVLPLNVSDNSAPAAT
KISSTSSVSSAVAAAVAVTGGGGRGAGGSNINNPSNGDVLGTVAAGGVVS
AMGAARLIPTSGVVAAGPQRASASVFGTAAAGGGQDGRSRGDAVGVAAVG
AAHGGGGGTGMRVDQDGLVDAVASRVSEEMAESMSELQEYMLQMVTARCR
QGVAEAMAATQETKDDERAALVEDISSSVDRSLRRGMAETVVNPLAKLFL
STARQVVAEPLQVLTQCLF*
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