prot_H-paniculata_contig34274.9156.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig34274.9156.1
Unique Nameprot_H-paniculata_contig34274.9156.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length246
Homology
BLAST of mRNA_H-paniculata_contig34274.9156.1 vs. uniprot
Match: W7TGQ6_9STRA (Retrotransposon unclassified n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TGQ6_9STRA)

HSP 1 Score: 179 bits (455), Expect = 1.530e-51
Identity = 107/245 (43.67%), Postives = 141/245 (57.55%), Query Frame = 0
Query:    2 ERTTEPLELVHTDIAGSVD-KSFGGCRFAFIFVDDYSRMRKVYTLRQNSEALWTLKQFERDVA------RANGLRIKRRQSDQGGEYTEKAFRQFCAENGIEQEFSGAYTTQQNGVMERSWHSIFEMARANMITANMRRRYWAKAVRSAVYCLKRAPTRPHNGG-TPYEKWYGETPKSDHLRVFGCTACVMFQSQQRRKLDDKAWTGVCVGYDEYSPS---YRIYNPENKSVQLSRHVRFDEEDF 235
            ER  EPLELVHTD+ G V+ +S GG R+A  F DDY+R R VY ++  SE+L  LK++ +D+       + N LR  R  SD GGEYT   F+ FC  +GI Q+F   Y  Q NG+ E+SWH +  MARA  I A + + +WA+A+ +A Y   R+       G TPY K +G+     HLR FGC A V   S +R K DD+A  G+ +GYD+   +   YRIY P       S HV FDEE F
Sbjct:   76 ERAKEPLELVHTDVLGPVEVESLGGARYAIGFTDDYTRWRVVYPMKHKSESLDCLKRYIQDMNISFRDHKVNTLRGLR--SDNGGEYTGIDFKNFCKNHGIRQDFGMPYGPQDNGLAEKSWHILCNMARALRIQAGLGKGFWAEALNTAAYIWNRSRNSALGPGETPYYKMFGKHASVKHLRTFGCKAFVHDTSVRRGKFDDRAVEGILIGYDDIGNNPKCYRIYIPSLGRYIRSGHVTFDEETF 318          
BLAST of mRNA_H-paniculata_contig34274.9156.1 vs. uniprot
Match: W7TIQ5_9STRA (Gag-pol polyprotein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TIQ5_9STRA)

HSP 1 Score: 185 bits (469), Expect = 3.490e-51
Identity = 109/245 (44.49%), Postives = 143/245 (58.37%), Query Frame = 0
Query:    2 ERTTEPLELVHTDIAGSVD-KSFGGCRFAFIFVDDYSRMRKVYTLRQNSEALWTLKQFERDVA------RANGLRIKRRQSDQGGEYTEKAFRQFCAENGIEQEFSGAYTTQQNGVMERSWHSIFEMARANMITANMRRRYWAKAVRSAVYCLKRAPTRPHNGG-TPYEKWYGETPKSDHLRVFGCTACVMFQSQQRRKLDDKAWTGVCVGYDEYSPS---YRIYNPENKSVQLSRHVRFDEEDF 235
            ER  EPLELVHTD+ G V+ +S GG R+A  F DDY+R R VY ++  SE+L  LK++ +D+       + N LR  R  SD GGEYT   F+ FC  +GI Q+F   Y  Q NGV E+SWH +  MAR+  I A + +R+WA+A+ +A Y L R+ T     G TPY K +G+     H R FGC A V   S +R K DD+A  G+ +GYD+   +   YRIY P       S HV FDEE F
Sbjct:   76 ERAKEPLELVHTDVLGPVEVESLGGARYAIGFTDDYTRWRVVYPMKHKSESLDCLKRYIQDMNISFRDHKVNTLRGLR--SDNGGEYTGIDFKNFCKNHGIRQDFGIPYGPQDNGVAEKSWHVLSNMARSLRIQAGLGKRFWAEALNTAAYILNRSRTSALGPGETPYYKMFGKHTSVKHFRTFGCKAFVHDTSVRRGKFDDRAVEGIMIGYDDIGNNPKCYRIYIPSIGKYIKSGHVTFDEETF 318          
BLAST of mRNA_H-paniculata_contig34274.9156.1 vs. uniprot
Match: A0A6A3BSI6_HIBSY (Integrase catalytic domain-containing protein n=1 Tax=Hibiscus syriacus TaxID=106335 RepID=A0A6A3BSI6_HIBSY)

HSP 1 Score: 187 bits (474), Expect = 1.680e-50
Identity = 99/234 (42.31%), Postives = 139/234 (59.40%), Query Frame = 0
Query:    1 EERTTEPLELVHTDIAGSVD-KSFGGCRFAFIFVDDYSRMRKVYTLRQNSEALWTLKQFERDVARANGLRIKRRQSDQGGEYTEKAFRQFCAENGIEQEFSGAYTTQQNGVMERSWHSIFEMARANMITANMRRRYWAKAVRSAVYCLKRAPTRPHNGGTPYEKWYGETPKSDHLRVFGCTACVMFQSQQRRKLDDKAWTGVCVGYDEYSPSYRIYNPENKSVQLSRHVRFDEE 233
            E R  +PLEL+HTD+ GS+   S G   +  +F+DD+SR   VY L+Q SE     K+F+  V R +G +IK  +SD+GGE+T + F++FC  NGI +      + QQNGV ER   +I +MAR+ + +  + + +WA+AV  AVY   R+PTR   G TP E W G  P   HLR FG    V    ++  KLDDK  + + +GYD  S  Y++YNP NK   +SR V F+EE
Sbjct:  399 ETRAKKPLELIHTDVCGSIKPSSLGNSNYFLLFIDDFSRKTWVYFLKQKSEVFEVFKKFKVAVERESGRKIKAMRSDRGGEFTSREFQEFCEANGIRRPMIVPRSPQQNGVAERKNITILDMARSMLKSKKLPKEFWAEAVACAVYLTNRSPTRSVWGKTPQEAWSGRKPGISHLRTFGSITHVHVPDERITKLDDKNESFIFIGYDANSKGYKLYNPNNKKFVISRDVVFNEE 632          
BLAST of mRNA_H-paniculata_contig34274.9156.1 vs. uniprot
Match: A0A2Z7CM54_9LAMI (Uncharacterized protein (Fragment) n=1 Tax=Dorcoceras hygrometricum TaxID=472368 RepID=A0A2Z7CM54_9LAMI)

HSP 1 Score: 185 bits (469), Expect = 4.650e-50
Identity = 98/232 (42.24%), Postives = 137/232 (59.05%), Query Frame = 0
Query:    3 RTTEPLELVHTDIAGSVD-KSFGGCRFAFIFVDDYSRMRKVYTLRQNSEALWTLKQFERDVARANGLRIKRRQSDQGGEYTEKAFRQFCAENGIEQEFSGAYTTQQNGVMERSWHSIFEMARANMITANMRRRYWAKAVRSAVYCLKRAPTRPHNGGTPYEKWYGETPKSDHLRVFGCTACVMFQSQQRRKLDDKAWTGVCVGYDEYSPSYRIYNPENKSVQLSRHVRFDEE 233
            R   PLEL+H+D+ G +   S G   +  IF+DD+SR   VY +++ SE   T K+F+  V + +G +I+  +SD+GGE+T   F++FC +NGI +  +  Y+ QQNGV ER   +I  M R+ +   NM + +WA+AV  AVY   R  T+  NG TP E   G  P   HLRVFG  A      ++R KLDDK+   V +GYD  S  Y++YNP N  + LSR V FDEE
Sbjct:  471 RAQHPLELIHSDVCGPIKPSSLGKSNYFIIFIDDFSRKTWVYFIKEKSEVFETFKKFKIMVEKQSGYQIQALRSDRGGEFTSNEFKKFCEDNGIHRPMTTPYSPQQNGVSERKNRTILNMVRSMLKRKNMPKEFWAEAVTCAVYLTNRWHTKSVNGKTPNEDCSGYKPNVAHLRVFGSIAYAHVPDEKRTKLDDKSARYVFIGYDTNSKCYKLYNPNNGKIILSRDVEFDEE 702          
BLAST of mRNA_H-paniculata_contig34274.9156.1 vs. uniprot
Match: A0A2K3KIW4_TRIPR (Copia-type polyprotein (Fragment) n=1 Tax=Trifolium pratense TaxID=57577 RepID=A0A2K3KIW4_TRIPR)

HSP 1 Score: 170 bits (431), Expect = 9.990e-49
Identity = 88/231 (38.10%), Postives = 135/231 (58.44%), Query Frame = 0
Query:    3 RTTEPLELVHTDIAGSVD-KSFGGCRFAFIFVDDYSRMRKVYTLRQNSEALWTLKQFERDVARANGLRIKRRQSDQGGEYTEKAFRQFCAENGIEQEFSGAYTTQQNGVMERSWHSIFEMARANMITANMRRRYWAKAVRSAVYCLKRAPTRPHNGGTPYEKWYGETPKSDHLRVFGCTACVMFQSQQRRKLDDKAWTGVCVGYDEYSPSYRIYNPENKSVQLSRHVRFDE 232
            R +  LEL+H+DI G +  +S GG R+   F DD+SR   +Y L++ S AL   K F+  V +     I+  ++D+GGEYT  AF  FC++ GI+++   AYT QQNGV ER   ++  + R+ +   ++ +R+W +A++ A Y + R+PT      TP E W G  P   H +VFGC A V     QR+KLDDK+   + +G  E S +Y++Y+P    + +SR V F+E
Sbjct:   33 RASARLELIHSDICGPITPQSNGGSRYFITFTDDFSRKTWIYVLKEKSLALDCFKSFKALVEKEAKCAIQCLRTDRGGEYTSNAFSDFCSKEGIKRQLIAAYTPQQNGVSERKNRTLLNIVRSMIHARSVPKRFWPEAIKWATYVMNRSPTLSVKDMTPEEAWSGRKPSVHHFKVFGCVAHVHIHDSQRKKLDDKSKKCILLGVSEESKAYKLYDPIENKIIISRDVIFEE 263          
BLAST of mRNA_H-paniculata_contig34274.9156.1 vs. uniprot
Match: Q9C7Y1_ARATH (Copia-type polyprotein, putative; 28768-32772 n=3 Tax=Arabidopsis thaliana TaxID=3702 RepID=Q9C7Y1_ARATH)

HSP 1 Score: 180 bits (457), Expect = 3.270e-48
Identity = 93/232 (40.09%), Postives = 143/232 (61.64%), Query Frame = 0
Query:    3 RTTEPLELVHTDIAGSVDK-SFGGCRFAFIFVDDYSRMRKVYTLRQNSEALWTLKQFERDVARANGLRIKRRQSDQGGEYTEKAFRQFCAENGIEQEFSGAYTTQQNGVMERSWHSIFEMARANMITANMRRRYWAKAVRSAVYCLKRAPTRPHNGGTPYEKWYGETPKSDHLRVFGCTACVMFQSQQRRKLDDKAWTGVCVGYDEYSPSYRIYNPENKSVQLSRHVRFDEE 233
            ++T+ L+LVHTDI G ++  S  G R+   F+DD+SR    Y L + SE     K+F+ +V R +G ++   +SD+GGEY  + F ++C E GI+++ + AYT QQNGV ER   S+  M R  ++  ++ R++W +AV+ AVY L R+P++  N  TP EKW    P  +HLR+FG  A  +   Q+R KLD+K+   V  G  + S +YR+Y+P    + +SR V+FDEE
Sbjct:  491 KSTQVLQLVHTDICGPINPASTSGKRYILNFIDDFSRKCWTYLLSEKSETFQFFKEFKAEVERESGKKLVCLRSDRGGEYNSREFDEYCKEFGIKRQLTAAYTPQQNGVAERKNRSVMNMTRCMLMEMSVPRKFWPEAVQYAVYILNRSPSKALNDITPEEKWSSWKPSVEHLRIFGSLAYALVPYQKRIKLDEKSIKCVMFGVSKESKAYRLYDPATGKILISRDVQFDEE 722          
BLAST of mRNA_H-paniculata_contig34274.9156.1 vs. uniprot
Match: W7T174_9STRA (Gag-pol polyprotein n=2 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7T174_9STRA)

HSP 1 Score: 180 bits (456), Expect = 3.920e-48
Identity = 106/245 (43.27%), Postives = 141/245 (57.55%), Query Frame = 0
Query:    2 ERTTEPLELVHTDIAGSVD-KSFGGCRFAFIFVDDYSRMRKVYTLRQNSEALWTLKQFERDVA------RANGLRIKRRQSDQGGEYTEKAFRQFCAENGIEQEFSGAYTTQQNGVMERSWHSIFEMARANMITANMRRRYWAKAVRSAVYCLKRAPTRPHNGG-TPYEKWYGETPKSDHLRVFGCTACVMFQSQQRRKLDDKAWTGVCVGYDEYSPS---YRIYNPENKSVQLSRHVRFDEEDF 235
            ER  EPLELVHTD+ G V+ +S GG R+A  F DDY+R R VY ++  SE+L  LK++ +D+       + N LR  R  SD GGEYT   F+ FC  +GI Q+F   Y  Q NG+ E+SWH +  MARA  I A + + +WA+A+ +A Y   R+       G TPY K +G+    +H R FGC A V   S +R K DD+A  G+ +GYD+   +   YRIY P       S HV FDEE F
Sbjct:  122 ERAKEPLELVHTDVLGPVEVESLGGARYAIGFTDDYTRWRVVYPMKHKSESLDCLKRYIQDMNISFRDHKVNTLRGLR--SDNGGEYTGVDFKNFCKNHGIRQDFGMPYGPQDNGLAEKSWHILCNMARALRIQAGLGKGFWAEALNTATYIWNRSRNSTLGAGETPYYKMFGKHASVNHFRTFGCKAFVHDTSVRRGKFDDRAVEGILIGYDDIGNNPKCYRIYIPSLGRYIRSGHVTFDEETF 364          
BLAST of mRNA_H-paniculata_contig34274.9156.1 vs. uniprot
Match: A0A151R9Z3_CAJCA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Cajanus cajan TaxID=3821 RepID=A0A151R9Z3_CAJCA)

HSP 1 Score: 172 bits (437), Expect = 4.230e-48
Identity = 92/233 (39.48%), Postives = 138/233 (59.23%), Query Frame = 0
Query:    1 EERTTEPLELVHTDIAGSVD-KSFGGCRFAFIFVDDYSRMRKVYTLRQNSEALWTLKQFERDVARANGLRIKRRQSDQGGEYTEKAFRQFCAENGIEQEFSGAYTTQQNGVMERSWHSIFEMARANMITANMRRRYWAKAVRSAVYCLKRAPTRPHNGGTPYEKWYGETPKSDHLRVFGCTACVMFQSQQRRKLDDKAWTGVCVGYDEYSPSYRIYNPENKSVQLSRHVRFDE 232
            E R  E L L+HTD+ G +  +SF G ++   F+DD+SR   VY L++  E   T K+F+  V +     +K  +SD+GGE+T   F ++C E+GI++  +  Y+ QQNGV ER   +I +M R+ +   NM +++WA+AV+ AVY   R P       TP E W G  P   HLRVFG  A      QQR KL+D++   + +GYDE S +Y++++P+NK V +SR V  +E
Sbjct:   82 EYRAKEQLGLIHTDLCGPITPESFSGKKYFVSFIDDFSRKTWVYFLKEKLEVFETFKKFKVMVEKEMSTFVKAVRSDRGGEFTSVEFNKYCEEHGIKRFLTAPYSPQQNGVAERKNRTILDMVRSMLKGKNMPKKFWAEAVQCAVYVQNRCPHAKLGEKTPQEIWSGMKPSVSHLRVFGSLAYGQVPRQQRTKLEDRSKKYIFIGYDEKSKAYKLFDPDNKKVVVSRDVHVEE 314          
BLAST of mRNA_H-paniculata_contig34274.9156.1 vs. uniprot
Match: A0A6L2N7P6_TANCI (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Tanacetum cinerariifolium TaxID=118510 RepID=A0A6L2N7P6_TANCI)

HSP 1 Score: 179 bits (453), Expect = 1.020e-47
Identity = 96/226 (42.48%), Postives = 134/226 (59.29%), Query Frame = 0
Query:    8 LELVHTDIAGSVDK-SFGGCRFAFIFVDDYSRMRKVYTLRQNSEALWTLKQFERDVARANGLRIKRRQSDQGGEYTEKAFRQFCAENGIEQEFSGAYTTQQNGVMERSWHSIFEMARANMITANMRRRYWAKAVRSAVYCLKRAPTRPHNGGTPYEKWYGETPKSDHLRVFGCTACVMFQSQQRRKLDDKAWTGVCVGYDEYSPSYRIYNPENKSVQLSRHVRFDE 232
            L+L+H D+ G +   S GG R+  +F+DDYSRM  VY L+  SEA    K+F+  V + +G  IK  Q+D+GGE+    F  FC E GI +E +  YT QQN   ER   +I EMAR+ M    + + +WA+AV ++VY L  +PT+     TPY+ W G  PK  HL VFGC A  +  S  R KLD+K+   + VGY   S +Y++Y+P N  V +SR V F+E
Sbjct:  506 LDLIHADLCGPMSVISIGGSRYFLLFIDDYSRMSWVYFLKNKSEAFNYFKKFKSYVEKQSGRNIKVIQTDRGGEFMSAEFITFCEEYGIHKELTAPYTPQQNSAAERKNRAIVEMARSMMNAKGVPKTFWAEAVATSVYLLIISPTKAVYNRTPYKAWKGNKPKVSHLCVFGCIANALLNSNSRLKLDEKSVKCIVVGYSPQSKAYKLYDPLNGKVLISRDVVFNE 731          
BLAST of mRNA_H-paniculata_contig34274.9156.1 vs. uniprot
Match: A0A4Y1QXI2_PRUDU (Transposable element protein n=1 Tax=Prunus dulcis TaxID=3755 RepID=A0A4Y1QXI2_PRUDU)

HSP 1 Score: 176 bits (446), Expect = 3.270e-47
Identity = 92/232 (39.66%), Postives = 139/232 (59.91%), Query Frame = 0
Query:    3 RTTEPLELVHTDIAGSVDK-SFGGCRFAFIFVDDYSRMRKVYTLRQNSEALWTLKQFERDVARANGLRIKRRQSDQGGEYTEKAFRQFCAENGIEQEFSGAYTTQQNGVMERSWHSIFEMARANMITANMRRRYWAKAVRSAVYCLKRAPTRPHNGGTPYEKWYGETPKSDHLRVFGCTACVMFQSQQRRKLDDKAWTGVCVGYDEYSPSYRIYNPENKSVQLSRHVRFDEE 233
            R + PLELVHTDI G +   S  G ++  +F DD +RM  VY +R  S A+   ++F+      +G +IK  +SD+GGE+    F  FCAE GI+++ + AY+ QQNGV ER   ++ EMA++ +   ++   +WA+AV +AVY L R PT+  N  TP+E + G  P   HL++FG    V+  S  R KL++ +   + VGY      YR+++P N+ + LSR V+FDEE
Sbjct:  211 RASYPLELVHTDICGPMKTDSISGNKYFLLFTDDCTRMSWVYFIRNKSSAMECFRKFKAMTELQSGYKIKGLRSDRGGEFLSSEFNSFCAEVGIQRQLTMAYSPQQNGVAERKNRTVVEMAKSMLHEKSIPYEFWAEAVNTAVYLLNRCPTKSLNKVTPFEAYTGRKPGIAHLKIFGSPCHVLIPSALRHKLEENSHKCIFVGYGLCEKGYRLFDPSNRKIMLSRDVKFDEE 442          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig34274.9156.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
W7TGQ6_9STRA1.530e-5143.67Retrotransposon unclassified n=1 Tax=Nannochlorops... [more]
W7TIQ5_9STRA3.490e-5144.49Gag-pol polyprotein n=1 Tax=Nannochloropsis gadita... [more]
A0A6A3BSI6_HIBSY1.680e-5042.31Integrase catalytic domain-containing protein n=1 ... [more]
A0A2Z7CM54_9LAMI4.650e-5042.24Uncharacterized protein (Fragment) n=1 Tax=Dorcoce... [more]
A0A2K3KIW4_TRIPR9.990e-4938.10Copia-type polyprotein (Fragment) n=1 Tax=Trifoliu... [more]
Q9C7Y1_ARATH3.270e-4840.09Copia-type polyprotein, putative; 28768-32772 n=3 ... [more]
W7T174_9STRA3.920e-4843.27Gag-pol polyprotein n=2 Tax=Nannochloropsis gadita... [more]
A0A151R9Z3_CAJCA4.230e-4839.48Retrovirus-related Pol polyprotein from transposon... [more]
A0A6L2N7P6_TANCI1.020e-4742.48Retrovirus-related Pol polyprotein from transposon... [more]
A0A4Y1QXI2_PRUDU3.270e-4739.66Transposable element protein n=1 Tax=Prunus dulcis... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001584Integrase, catalytic corePFAMPF00665rvecoord: 5..117
e-value: 6.4E-21
score: 74.7
IPR001584Integrase, catalytic corePROSITEPS50994INTEGRASEcoord: 3..168
score: 19.513
IPR036397Ribonuclease H superfamilyGENE3D3.30.420.10coord: 1..193
e-value: 4.1E-31
score: 109.7
NoneNo IPR availablePANTHERPTHR11439:SF250coord: 3..234
IPR039537Retrotransposon Ty1/copia-likePANTHERPTHR11439GAG-POL-RELATED RETROTRANSPOSONcoord: 3..234
IPR012337Ribonuclease H-like superfamilySUPERFAMILY53098Ribonuclease H-likecoord: 3..162

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig34274contigH-paniculata_contig34274:517..1254 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig34274.9156.1mRNA_H-paniculata_contig34274.9156.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig34274 517..1254 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig34274.9156.1 ID=prot_H-paniculata_contig34274.9156.1|Name=mRNA_H-paniculata_contig34274.9156.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=246bp
EERTTEPLELVHTDIAGSVDKSFGGCRFAFIFVDDYSRMRKVYTLRQNSE
ALWTLKQFERDVARANGLRIKRRQSDQGGEYTEKAFRQFCAENGIEQEFS
GAYTTQQNGVMERSWHSIFEMARANMITANMRRRYWAKAVRSAVYCLKRA
PTRPHNGGTPYEKWYGETPKSDHLRVFGCTACVMFQSQQRRKLDDKAWTG
VCVGYDEYSPSYRIYNPENKSVQLSRHVRFDEEDFVTDHRGQQEHE
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001584Integrase_cat-core
IPR036397RNaseH_sf
IPR039537Retrotran_Ty1/copia-like
IPR012337RNaseH-like_sf