mRNA_H-paniculata_contig3427.9155.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	mRNA_H-paniculata_contig3427.9155.1
Unique Name	mRNA_H-paniculata_contig3427.9155.1
Type	mRNA
Organism	Halopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)

Homology

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BLAST of mRNA_H-paniculata_contig3427.9155.1 vs. uniprot
Match: A0A6H5KF18_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KF18_9PHAE)

HSP 1 Score: 200 bits (508), Expect = 1.170e-49
Identity = 124/357 (34.73%), Postives = 190/357 (53.22%), Query Frame = 2

Query:  458 SEAEPIPRNIDDVRRSKYRPLWEAASTRELGGHAKI*RFTVVSDR*R-KKPLRRQFNFSYKTNQMGDVVKFKASLVADGRTQVQDVEYDEGFARTPSAAAVKTVLAVAVQEDLQLFHVDT*-AFVQAGLDHTLFMRLPAGCGSMSGSTVKLDRALYGLKQAGRQWNTRLVDELVDFDMEQCLSEPACFVR*STKRLP*PCQYMRMA*LVVSKEGDCSSHSDALPGKFPMTIKGN*PGTTDMHSVGIGVRVD*CRTKM----FLSIASWNSSKSPVSKLPATSLDDPGPHRKDEEGGDCPFRAAIGCLIGLASMTRPDIANAVRAMARHSHNSCPRHWSGVLTILSYLNNIRSLGIIY 1510
            S  + +P   +DV  SKY+  WEAA  +E+ GH K   FT V +    +K +  ++ FS+KTN+ G +V FKA +VA G +Q+  +++    +  PSAA++KTV+AVA ++  +L H D   A++ A L   +++R P GCGSMSG  VK++RALYGLKQ+GR+W     D L++   EQC  +P  F +     +           +V + EG+      +L  KFP+   G     T      I + V+   TK+    ++         +  +  PA +  D GP R DE   D P R AIGCL+    +TRPDIA  +  + + +H+   R W+ ++ I+SYLN  +  GI Y
Sbjct:  207 SNVKAVPMTYNDVMCSKYKVFWEAAMKKEIDGHDKTGTFTKVKELPEGRKAIGSKWVFSWKTNEKGLIVDFKARMVARGFSQIPGIDFHHSSSACPSAASIKTVIAVATEKGKKLAHWDVKQAYIHAKLKEEIYLRFPEGCGSMSGKVVKVERALYGLKQSGREWGFEAADALIENGYEQCRVDPCVFRKVVDGEVVGLIVIYVDDIIVAADEGEREELFASLNKKFPVKDVGE---CTWYDGCAIAMDVENGITKLSQTAYIESMLKRFDVTTTAFTPAATDADLGPKRDDEPAVDKPVREAIGCLM-WTKLTRPDIALPLNKLQKIAHSPTGRMWNALVRIMSYLNFTKDFGITY 559

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BLAST of mRNA_H-paniculata_contig3427.9155.1 vs. uniprot
Match: A0A6H5K1I0_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1I0_9PHAE)

HSP 1 Score: 203 bits (517), Expect = 1.450e-49
Identity = 131/371 (35.31%), Postives = 196/371 (52.83%), Query Frame = 2

Query:  422 VT*DLSSKPFPLSEAEPIPRNIDDVRRSKYRPLWEAASTRELGGHAKI*RFTVVSDR*R-KKPLRRQFNFSYKTNQMGDVVKFKASLVADGRTQVQDVEYDEGFARTPSAAAVKTVLAVAVQEDLQLFHVDT*-AFVQAGLDHTLFMRLPAGCGSMSGSTVKLDRALYGLKQAGRQWNTRLVDELVDFDMEQCLSEPACFVR*STKRLP*PCQYMRMA*LVVSKEGDCSSHSDALPGKFPMTIKGN*PGTTDMHSVGIGVRVD*CRTKMFLSIASWNSSK----SPVSKLPATSLDDPGPHRKDEEGGDCPFRAAIGCLIGLASMTRPDIANAVRAMARHSHNSCPRHWSGVLTILSYLNNIRSLGIIYPR 1516
            +T  +  KP   S+ E +P    DV  SKY+  WEAA  +E+ GH K   FT V +    +K +  ++ FS+KTN+ G +V FKA +VA G +Q+  +++    +  PSAA++KTV+AVA ++  +L H D   A++ A L   +++R P GCGSMSG  VK++RALYGLKQ+GR+W     D L++   EQC  +P  F +     +           LV + EG+      +L  KFP+   G     T      I + V+   TK+  +       K    +  +  PA +  D GP R DE   D P R AIGCL+    +TRPDIA  +  + + +H+   R W+ ++ I+SYLN  +  GI Y R
Sbjct:  344 ITSPIGQKP---SDVEAVPMTYKDVMCSKYKVFWEAAMKKEIDGHDKTGTFTKVKELPEGRKAIGSKWVFSWKTNEKGLIVDFKARMVARGFSQIPGIDFHHSSSACPSAASIKTVIAVATEKGKKLAHWDVKQAYIHAKLKEEIYLRFPEGCGSMSGKVVKVERALYGLKQSGREWGFEAADALIENGYEQCRVDPCVFRKVVDGEVVGLIVMYVDDILVAADEGEREELFASLNKKFPVKDLGE---CTWYDGCAIAMDVENGITKLSQTAYIEGMLKRFDVTTTAFTPAATDADLGPKRDDEPAVDKPVREAIGCLM-WTKLTRPDIALPLNKLQKIAHSPTGRIWNALVRIMSYLNFTKDFGITYVR 707

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BLAST of mRNA_H-paniculata_contig3427.9155.1 vs. uniprot
Match: A0A6H5JI74_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JI74_9PHAE)

HSP 1 Score: 203 bits (516), Expect = 2.220e-49
Identity = 127/359 (35.38%), Postives = 190/359 (52.92%), Query Frame = 2

Query:  458 SEAEPIPRNIDDVRRSKYRPLWEAASTRELGGHAKI*RFTVVSDR*R-KKPLRRQFNFSYKTNQMGDVVKFKASLVADGRTQVQDVEYDEGFARTPSAAAVKTVLAVAVQEDLQLFHVDT*-AFVQAGLDHTLFMRLPAGCGSMSGSTVKLDRALYGLKQAGRQWNTRLVDELVDFDMEQCLSEPACFVR*STKRLP*PCQYMRMA*LVVSKEGDCSSHSDALPGKFPMTIKGN*PGTTDMHSVGIGVRVD*CRTKM----FLSIASWNSSKSPVSKLPATSLDDPGPHRKDEEGGDCPFRAAIGCLIGLASMTRPDIANAVRAMARHSHNSCPRHWSGVLTILSYLNNIRSLGIIYPR 1516
            S+ E +P    DV  SKY+  WEAA  +E+ GH K   FT V +    +K +  ++ FS+KTN+ G +V FKA +VA G +Q+  +++    +  PSAA++KTV+AVA ++  +L H D   A++ A L   +++R P GCGSMSG  VK++RALYGLKQ GR+W     D L++   EQC  +P  F +     +           LV + EG+      +L  KFP+   G     T      I + V+   TK+    ++         +  +  PA +  D GP R DE   D P R AIGCL+    +TRPDIA  +  + + +H+   R W+ ++ I+SYLN  +  GI Y R
Sbjct:  494 SDVEAVPMTYKDVMCSKYKVFWEAAMKKEIDGHDKTGTFTKVKELPEGRKAIGSKWVFSWKTNEKGLIVDFKARMVARGFSQIPGIDFHHSSSACPSAASIKTVIAVATEKGKKLAHWDVKQAYIHAKLKEEIYLRFPEGCGSMSGKVVKVERALYGLKQGGREWGFEAADALIENGYEQCRVDPCVFRKVVDGEVVGLIVIYVDDILVAADEGEREELFASLNKKFPVKDLGE---CTWYDGCAIAMDVENGITKLSQTAYIESMLKRFDVTTTAFTPAATDADLGPKRDDEPAVDKPVREAIGCLM-WTKLTRPDIALPLNKLQKIAHSPTGRIWNALVRIMSYLNFTKDFGITYVR 848

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BLAST of mRNA_H-paniculata_contig3427.9155.1 vs. uniprot
Match: A0A6H5JUN0_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUN0_9PHAE)

HSP 1 Score: 191 bits (486), Expect = 5.180e-49
Identity = 121/358 (33.80%), Postives = 188/358 (52.51%), Query Frame = 2

Query:  458 SEAEPIPRNIDDVRRSKYRPLWEAASTRELGGHAKI*RFTVVSDR*R-KKPLRRQFNFSYKTNQMGDVVKFKASLVADGRTQVQDVEYDEGFARTPSAAAVKTVLAVAVQEDLQLFHVDT*-AFVQAGLDHTLFMRLPAGCGSMSGSTVKLDRALYGLKQAGRQWNTRLVDELVDFDMEQCLSEPACFVR*STKRLP*PCQYMRMA*LVVSKEGDCSSHSDALPGKFPMTIKGN*P---GTTDMHSVGIGVRVD*CRTKMFLSIASWNSSKSPVSKLPATSLDDPGPHRKDEEGGDCPFRAAIGCLIGLASMTRPDIANAVRAMARHSHNSCPRHWSGVLTILSYLNNIRSLGIIYPR 1516
            S+ E +P    DV  SKY+  WE A  +E+ GH K   FT V +    +K +  ++ FS+KTN+ G ++ FKA +VA G +Q+  +++    +  PSAA++KTV+AVA ++  +L H D   A++ A L   +++R P GCGSMSG  VK++RALYGLKQ+GR+W     D L+++  EQC  +P  F +     +           LV + EG+      +L  +FP+   G      G      V  G+       K+   +  +N + +  +  P  +  D GP   DE   D P R AIG L+    +TRPDIA  +  + + +H+   R W+ ++ I+SYLN  +  GI Y R
Sbjct:   10 SDVEAVPMTYKDVMCSKYKVFWETAMKKEIDGHDKTGTFTKVKELPEGRKAIGSKWVFSWKTNEKGLILDFKARVVARGFSQIPGIDFHRSSSACPSAASLKTVIAVATEKGKKLAHWDVKQAYIHAKLKEEIYLRFPEGCGSMSGKVVKVERALYGLKQSGREWGFEAADALIEYGYEQCRVDPCIFRKVVDGEVVGLIVINVDDILVAADEGEREDLFASLNNRFPVKDLGECTWYDGCAIAMDVENGITTLSQTAKIESMLKRFNVTTTAFT--PTATDADIGPKGDDEPAVDKPVREAIGYLM-WTKLTRPDIALPLNKLQKIAHSPTGRIWNALVRIMSYLNFTKDFGITYVR 364

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BLAST of mRNA_H-paniculata_contig3427.9155.1 vs. uniprot
Match: A0A6H5JRY6_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRY6_9PHAE)

HSP 1 Score: 196 bits (499), Expect = 1.420e-48
Identity = 125/359 (34.82%), Postives = 189/359 (52.65%), Query Frame = 2

Query:  458 SEAEPIPRNIDDVRRSKYRPLWEAASTRELGGHAKI*RFTVVSDR*R-KKPLRRQFNFSYKTNQMGDVVKFKASLVADGRTQVQDVEYDEGFARTPSAAAVKTVLAVAVQEDLQLFHVDT*-AFVQAGLDHTLFMRLPAGCGSMSGSTVKLDRALYGLKQAGRQWNTRLVDELVDFDMEQCLSEPACFVR*STKRLP*PCQYMRMA*LVVSKEGDCSSHSDALPGKFPMTIKGN*PGTTDMHSVGIGVRVD*CRTKM----FLSIASWNSSKSPVSKLPATSLDDPGPHRKDEEGGDCPFRAAIGCLIGLASMTRPDIANAVRAMARHSHNSCPRHWSGVLTILSYLNNIRSLGIIYPR 1516
            S+ E +P    DV  SKY+  WEAA T+E+ GH K   F  V +    +K +  ++ FS++TN+ G +V FKA +VA G +Q+ D+++    +  PSAA +K V+AVA ++  +L H D   A++ A L   +++R P GCGSMSG  VK++RALYGLKQ+GR+W     D L++   EQC  +P  F       +           LV + EG+      +L  KFP+  +G     T      + + V+   TK+    ++         +  +  PA +  D GP R DE   D P R AIGCL+    +TRPDIA  +  + + +H+   R W+  + I+SYLN  +  GI Y R
Sbjct:  270 SDVEAVPMTYKDVMCSKYKVFWEAAMTKEIEGHDKTGTFPKVKELPEGRKAIGSKWAFSWRTNEKGLIVDFKARMVARGFSQIPDIDFHHSSSACPSAAFIKAVIAVATEKGKKLAHWDVKQAYIHAKLREEIYLRFPEGCGSMSGK-VKVERALYGLKQSGREWGFEAADALIENGYEQCRVDPCVFRNVVDGEVVGLIVIYVDDILVAADEGEREELFASLNKKFPVNDQGE---CTWYDGCAVAMDVEYGITKLSQTAYIESMLKRFDVTTTAFTPAATDADLGPKRDDEPAVDKPVREAIGCLM-WTKLTRPDIALPLNKLQKIAHSPTGRIWNAFVRIMSYLNFTKDFGITYVR 623

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BLAST of mRNA_H-paniculata_contig3427.9155.1 vs. uniprot
Match: A0A6H5KZ24_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZ24_9PHAE)

HSP 1 Score: 197 bits (501), Expect = 2.020e-48
Identity = 125/360 (34.72%), Postives = 190/360 (52.78%), Query Frame = 2

Query:  455 LSEAEPIPRNIDDVRRSKYRPLWEAASTRELGGHAKI*RFTVVSDR*R-KKPLRRQFNFSYKTNQMGDVVKFKASLVADGRTQVQDVEYDEGFARTPSAAAVKTVLAVAVQEDLQLFHVDT*-AFVQAGLDHTLFMRLPAGCGSMSGSTVKLDRALYGLKQAGRQWNTRLVDELVDFDMEQCLSEPACFVR*STKRLP*PCQYMRMA*LVVSKEGDCSSHSDALPGKFPMTIKGN*PGTTDMHSVGIGVRVD*CRTKMFLSIASWNSSK----SPVSKLPATSLDDPGPHRKDEEGGDCPFRAAIGCLIGLASMTRPDIANAVRAMARHSHNSCPRHWSGVLTILSYLNNIRSLGIIYPR 1516
            LS+ + +P    DV  SKY   WEAA   E+ GH K   FT V +    +K +  ++ FS+K N+ G +V FKA +VA G +Q+  +++    +  PSAA++KTV+AVA ++  +L H D   A++ A L   +++R P GCGSMSG  VK++RALYGLKQ+GR+W     D L++   EQC  +P  F +     +           +V + EG+      +L  KFP+   G     T      I + V+   TK+  +    +  K    + ++   A +  D GP R DE   D P R AIGCL+    +TRPDIA  +  + + +H+   R W+ ++ I+SYLN  +  GI Y R
Sbjct:  258 LSDVQAVPMTYKDVMCSKYNVFWEAAIKEEIDGHDKTGTFTKVKELPEGRKAIGSKWVFSWKKNEKGLIVDFKARMVARGFSQIPGIDFHHSSSACPSAASIKTVIAVATEKGKKLAHWDVKQAYIHAKLKEEIYLRFPEGCGSMSGKVVKVERALYGLKQSGREWGFEAADALIENGYEQCRVDPCVFQKVVDGEVVGLIVIYVDDIIVAADEGEPEELFASLNKKFPVKDLGE---CTCYDGCAIAMDVENGITKLSQTAHIESMLKRFDVTTIAFTTAATDADLGPKRDDEPAVDKPVREAIGCLM-WTKLTRPDIALPLNKLQKIAHSPTGRIWNALVRIMSYLNFTKDFGITYVR 613

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BLAST of mRNA_H-paniculata_contig3427.9155.1 vs. uniprot
Match: A0A6H5J7P7_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J7P7_9PHAE)

HSP 1 Score: 192 bits (489), Expect = 3.000e-48
Identity = 136/406 (33.50%), Postives = 201/406 (49.51%), Query Frame = 2

Query:  371 ELKFNVSDVL-EDEVAFLVT*DLSSKPFPL---------------SEAEPIPRNIDDVRRSKYRPLWEAASTRELGGHAKI*RFTVVSDR*R-KKPLRRQFNFSYKTNQMGDVVKFKASLVADGRTQVQDVEYDEGFARTPSAAAVKTVLAVAVQEDLQLFHVDT*-AFVQAGLDHTLFMRLPAGCGSMSGSTVKLDRALYGLKQAGRQWNTRLVDELVDFDMEQCLSEPACFVR*STKRLP*PCQYMRMA*LVVSKEGDCSSHSDALPGKFPMTIKGN*PGTTDMHSVGIGVRVD*CRTKMFLSIASWNSSK------SPVSKLPATSLDDPGPHRKDEEGGDCPFRAAIGCLIGLASMTRPDIANAVRAMARHSHNSCPRHWSGVLTILSYLNNIRSLGIIYPR 1516
            ELK  + +VL  ++ AF    D S    PL               S+ E +P    D+  SKY+  WEAA  +E+ GH K   FT V +    +K +  ++  S+KTN+ G  V FKA +VA G +Q+  +++       PSAA++KTV+AVA ++  +L   D   A++ A L   +++R P GCGSMSG  VK++RALYGLKQ+GR+W     D L++   EQC  +P  F +     +           LV + EG+      +L  KFP+              +G     D C   M LS  ++  S       +  +  PA +  D GP R DE   D P R AIGCL+    +TRPDIA  +  + + +H+   R W+ ++ I+SYLN  +  GI Y R
Sbjct:   93 ELKREMQEVLGPEQQAFGAEVDASGSSQPLPDPQLSMTSPIGQKPSDVEAVPMTYKDMMCSKYKVFWEAAMKKEIDGHDKTGTFTKVKELPEGRKAIGSKWVLSWKTNENGLTVDFKARMVARGFSQIPGIDFHHSSLACPSAASIKTVIAVATEKGKKLAQWDVKQAYIHAKLKEEIYLRFPEGCGSMSGKVVKVERALYGLKQSGREWWFEAADALIENGYEQCRVDPCVFRKVVDGEVVGLIVIYVDDILVAADEGEREELFASLNKKFPV------------KDLGECTWYDGCAIAMDLSQTAYIESMLKRFDVTTNAFTPAATDADLGPKRDDEPAVDKPVREAIGCLM-WTKLTRPDIALPLNKLQKIAHSPTGRIWNALVRIMSYLNFTKDFGITYVR 485

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BLAST of mRNA_H-paniculata_contig3427.9155.1 vs. uniprot
Match: A0A6H5K1G1_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1G1_9PHAE)

HSP 1 Score: 188 bits (477), Expect = 1.110e-46
Identity = 121/359 (33.70%), Postives = 188/359 (52.37%), Query Frame = 2

Query:  458 SEAEPIPRNIDDVRRSKYRPLWEAASTRELGGHAKI*RFTVVSDR*R-KKPLRRQFNFSYKTNQMGDVVKFKASLVADGRTQVQDVEYDEGFARTPSAAAVKTVLAVAVQEDLQLFHVDT*-AFVQAGLDHTLFMRLPAGCGSMSGSTVKLDRALYGLKQAGRQWNTRLVDELVDFDMEQCLSEPACFVR*STKRLP*PCQYMRMA*LVVSKEGDCSSHSDALPGKFPMTIKGN*PGTTDMHSVGIGVRVD*CRTKM----FLSIASWNSSKSPVSKLPATSLDDPGPHRKDEEGGDCPFRAAIGCLIGLASMTRPDIANAVRAMARHSHNSCPRHWSGVLTILSYLNNIRSLGIIYPR 1516
            S+ E +P    D   SKY+  WEAA  +E+ GH K   FT V +    +K +  ++ FS+KTN+ G +V  KA +VA   +Q+  +++    +  PSAA++KTV+AVA ++  +L H D   A++ A L    ++R P GCGS+SG  VK++RALYGLKQ+GR+W     D L++ + EQC  +P  F +     +           LV + EG+      +L  KFP+   G     T      I + V+   TK+    ++         +  +  PA +  D GP R D+   D P R AIGCL+    +TRPDIA  +  + + +H+   R W+ ++ I+SYLN  +  GI + R
Sbjct:   10 SDVEAVPMTYKDGMCSKYKVFWEAAMKKEIDGHDKTGTFTKVKELPEGRKAIGLKWVFSWKTNEKGLIVDNKARMVARVFSQIPGIDFHHSSSACPSAASIKTVIAVATEKGKKLAHWDVKQAYIHAMLKEETYLRFPEGCGSISGKVVKVERALYGLKQSGREWGFEAADALIESEYEQCRVDPCVFRKVVDGEVVGLIVIYVDDILVAADEGEREELFASLNKKFPVKDLGE---CTWYDGCAIAMDVENGITKLSQTAYIESMLKRFDVTTTAFTPAATDADLGPTRDDKPAVDKPVREAIGCLM-WTKLTRPDIALPLNKLHKIAHSPTWRKWNALVRIMSYLNFTKDFGITFVR 364

[Close]

BLAST of mRNA_H-paniculata_contig3427.9155.1 vs. uniprot
Match: A0A6H5JXE8_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXE8_9PHAE)

HSP 1 Score: 183 bits (464), Expect = 1.650e-45
Identity = 122/368 (33.15%), Postives = 186/368 (50.54%), Query Frame = 2

Query:  458 SEAEPIPRNIDDVRRSKYRPLWEAASTRELGGHAKI*RFTVVSDR*R-KKPLRRQFNFSYKTNQMGDVVKFKASLVADGRTQVQDVEYDEGFARTPSAAAVKTVLAVAVQEDLQLFHVDT*-AFVQAGLDHTLFMRLPAGCGSMSGSTVKLDRALYGLKQAGRQWNTRLVDELVDFDMEQCLSEPACFVR*STKRLP*PCQYMRMA*LVVSKEGDCSSHSDALPGKFPMTIKGN*PGTTDMHSVGIGVRVD*CRTKMFLS--IASWNSSKSPVSKL-----------PATSLDDPGPHRKDEEGGDCPFRAAIGCLIGLASMTRPDIANAVRAMARHSHNSCPRHWSGVLTILSYLNNIRSLGIIYPR 1516
            S+ E +P    DV  SKY+  WEAA   E+  H K   F+ V +    +K +  ++ FS+KTN+ G +V FKA +VA G +++  +++    +  PSAA++KTV+AVA ++  +L H D   A++ A L+  +++R P GC  MSG  VK++RALYG KQ+GR+W     D L++   EQC  +P  F +     +           LV + EG+      +L  K P+              +G     D C T M +   IA  + +    S L           PA +  D GP R DE   D P R AIGCL+    +TRPDIA  +  + + +H+   R W+ ++ I+SYL+  +  GI Y R
Sbjct:   10 SDVEAVPMTYKDVMCSKYKVFWEAAMENEIDDHDKPGTFSKVKELPEGRKAIGSKWVFSWKTNEKGLIVDFKARMVARGFSRIPGIDFHHSSSACPSAASIKTVIAVATEKGKKLAHWDVKQAYIHAKLEEEIYLRFPEGCRGMSGKVVKVERALYGPKQSGREWGFEAADALIENGYEQCRVDPCVFRKVVDGEVVGLIVIYVDDILVAADEGEREELFASLNKKVPV------------KDLGECTWYDGCATAMDVENGIAKLSHTAYIESMLKRFDVTTTAFTPAATDADLGPKRDDEPAADKPVREAIGCLM-WTKLTRPDIALPLNKLQKIAHSPTGRIWNALVRIMSYLSFTKDFGITYVR 364

[Close]

BLAST of mRNA_H-paniculata_contig3427.9155.1 vs. uniprot
Match: A0A6H5JK49_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JK49_9PHAE)

HSP 1 Score: 182 bits (463), Expect = 2.050e-44
Identity = 118/335 (35.22%), Postives = 176/335 (52.54%), Query Frame = 2

Query:  458 SEAEPIPRNIDDVRRSKYRPLWEAASTRELGGHAKI*RFTVVSDR*R-KKPLRRQFNFSYKTNQMGDVVKFKASLVADGRTQVQDVEYDEGFARTPSAAAVKTVLAVAVQEDLQLFHVDT*-AFVQAGLDHTLFMRLPAGCGSMSGSTVKLDRALYGLKQAGRQWNTRLVDELVDFDMEQCLSEPACFVR*STKRLP*PCQYMRMA*LVVSKEGDCSSHSDALPGKFPMTIKGN*PGTTDMHSVGIGVRVD*CRTKM----FLSIASWNSSKSPVSKLPATSLDDPGPHRKDEEGGDCPFRAAIGCLIGLASMTRPDIANAVRAMARHSHNSCPR 1444
            S+ E +P    DV  SKY+  WEAA  +E+ GH K   FT V +    ++ +  ++ FS KTN  G +V FKA +VA G +Q+  +++    +  PSAA++KTV+AVA ++  +L H D   A++ A L   +++RLP GCGSMSG  VK++RALYGLKQ+GR+W   + D L++   EQC  +P  F +     +           LV + EG+      +L  KFP+   G     T      I + V+   TK+    ++         +  +  PA +  D GP R DE   D P R AIGCLI    +TRPDIA  +  + + +H+   R
Sbjct:  277 SDVEAVPMTYKDVVCSKYKVFWEAAMKKEIDGHDKTGTFTKVKELPEGREAIGSKWVFSSKTNGKGLIVDFKARMVARGFSQIPGIDFHHSSSAFPSAASIKTVIAVATEKGKKLAHWDVKQAYIHAKLKEEIYLRLPEGCGSMSGKVVKVERALYGLKQSGREWGFEVADALIENGCEQCRVDPCVFRKVVDGEVVGLIVIYVDEILVAADEGEREELFASLNKKFPVKYMGE---CTWFDGCAIAMDVENGITKLSQTAYIESMLKRFDVTTTAFTPAATDADLGPKRDDEPAVDKPVREAIGCLI-WTKLTRPDIALPLNKLQKIAHSPTGR 607

The following BLAST results are available for this feature:

BLAST of mRNA_H-paniculata_contig3427.9155.1 vs. uniprot

BLAST of mRNA_H-paniculata_contig3427.9155.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A6H5KF18_9PHAE	1.170e-49	34.73	Reverse transcriptase Ty1/copia-type domain-contai...	[more]
A0A6H5K1I0_9PHAE	1.450e-49	35.31	Reverse transcriptase Ty1/copia-type domain-contai...	[more]
A0A6H5JI74_9PHAE	2.220e-49	35.38	Reverse transcriptase Ty1/copia-type domain-contai...	[more]
A0A6H5JUN0_9PHAE	5.180e-49	33.80	Reverse transcriptase Ty1/copia-type domain-contai...	[more]
A0A6H5JRY6_9PHAE	1.420e-48	34.82	Reverse transcriptase Ty1/copia-type domain-contai...	[more]
A0A6H5KZ24_9PHAE	2.020e-48	34.72	Reverse transcriptase Ty1/copia-type domain-contai...	[more]
A0A6H5J7P7_9PHAE	3.000e-48	33.50	Reverse transcriptase Ty1/copia-type domain-contai...	[more]
A0A6H5K1G1_9PHAE	1.110e-46	33.70	Reverse transcriptase Ty1/copia-type domain-contai...	[more]
A0A6H5JXE8_9PHAE	1.650e-45	33.15	Reverse transcriptase Ty1/copia-type domain-contai...	[more]
A0A6H5JK49_9PHAE	2.050e-44	35.22	Reverse transcriptase Ty1/copia-type domain-contai...	[more]

Pages

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-paniculata_contig3427	contig	H-paniculata_contig3427:1175..10750 -

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 vs UniRef90	2022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous	2021-02-24

Properties


Property Name	Value
Hectar predicted targeting category	signal peptide
Exons	3
Model size	5772
Cds size	1026
Stop	1
Start	1

Relationships

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
mRNA_H-paniculata_contig3427.9155.1	prot_H-paniculata_contig3427.9155.1	Halopteris paniculata Hal_grac_a_UBK monoicous	polypeptide	H-paniculata_contig3427 2523..3867 -

The following UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
1622930058.6730072-UTR-H-paniculata_contig3427:1174..2522	1622930058.6730072-UTR-H-paniculata_contig3427:1174..2522	Halopteris paniculata Hal_grac_a_UBK monoicous	UTR	H-paniculata_contig3427 1175..2522 -
1691481129.5817509-UTR-H-paniculata_contig3427:1174..2522	1691481129.5817509-UTR-H-paniculata_contig3427:1174..2522	Halopteris paniculata Hal_grac_a_UBK monoicous	UTR	H-paniculata_contig3427 1175..2522 -
1622930058.7191224-UTR-H-paniculata_contig3427:3867..3945	1622930058.7191224-UTR-H-paniculata_contig3427:3867..3945	Halopteris paniculata Hal_grac_a_UBK monoicous	UTR	H-paniculata_contig3427 3868..3945 -
1691481129.6146767-UTR-H-paniculata_contig3427:3867..3945	1691481129.6146767-UTR-H-paniculata_contig3427:3867..3945	Halopteris paniculata Hal_grac_a_UBK monoicous	UTR	H-paniculata_contig3427 3868..3945 -
1622930058.7337584-UTR-H-paniculata_contig3427:7430..10750	1622930058.7337584-UTR-H-paniculata_contig3427:7430..10750	Halopteris paniculata Hal_grac_a_UBK monoicous	UTR	H-paniculata_contig3427 7431..10750 -
1691481129.622905-UTR-H-paniculata_contig3427:7430..10750	1691481129.622905-UTR-H-paniculata_contig3427:7430..10750	Halopteris paniculata Hal_grac_a_UBK monoicous	UTR	H-paniculata_contig3427 7431..10750 -

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
1622930058.6901054-CDS-H-paniculata_contig3427:2522..3383	1622930058.6901054-CDS-H-paniculata_contig3427:2522..3383	Halopteris paniculata Hal_grac_a_UBK monoicous	CDS	H-paniculata_contig3427 2523..3383 -
1691481129.594436-CDS-H-paniculata_contig3427:2522..3383	1691481129.594436-CDS-H-paniculata_contig3427:2522..3383	Halopteris paniculata Hal_grac_a_UBK monoicous	CDS	H-paniculata_contig3427 2523..3383 -
1622930058.703874-CDS-H-paniculata_contig3427:3702..3867	1622930058.703874-CDS-H-paniculata_contig3427:3702..3867	Halopteris paniculata Hal_grac_a_UBK monoicous	CDS	H-paniculata_contig3427 3703..3867 -
1691481129.6061702-CDS-H-paniculata_contig3427:3702..3867	1691481129.6061702-CDS-H-paniculata_contig3427:3702..3867	Halopteris paniculata Hal_grac_a_UBK monoicous	CDS	H-paniculata_contig3427 3703..3867 -

Sequences

The following sequences are available for this feature:

protein sequence
mRNA from alignment at H-paniculata_contig3427:1175..10750-
coding sequence from alignment at H-paniculata_contig3427:1175..10750-

protein sequence of mRNA_H-paniculata_contig3427.9155.1

>prot_H-paniculata_contig3427.9155.1 ID=prot_H-paniculata_contig3427.9155.1|Name=mRNA_H-paniculata_contig3427.9155.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=342bp
MRGLSQKVLGVLLCSLFGVHVAHGDFLDYPLTNRELEIEAGYYDRSGKYL
GGIPKVGSEYFQRGQCVTPVYGTSPTGTSSSGAYNATNCLLWEERRSVEI
DEEGAIVEGDSKDGSEFRVCSCYELTENNNCLQWNCNQVMVDRDTECVDN
TEFYNRRLRQVCYTVINISSGRCRCDNETELQFCTIWSCEEYLGNDIVYE
TNECVEISVSRQHCNAWTAILISSEGASARVCECVAEEFGDGICSMWECK
EKRSNSCERCNDMALSVACFGVLGLLGVLQLIKSFHAKEFLSCCVVLRVL
WIIAAAGAAIFYGGQTGGMYVGIMWVGVGGLYAFCCRPTKD*

mRNA from alignment at H-paniculata_contig3427:1175..10750-

Legend: UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_H-paniculata_contig3427.9155.1 ID=mRNA_H-paniculata_contig3427.9155.1|Name=mRNA_H-paniculata_contig3427.9155.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=9576bp|location=Sequence derived from alignment at H-paniculata_contig3427:1175..10750- (Halopteris paniculata Hal_grac_a_UBK monoicous)
TTTCCGACTGCTTCGTCTTCCTCGAGTGCTTCGTCGTCTTCCTTCATTTC
GTCGTCGTCTACTTCGACATTTGCATCATCACTGAAGTCTACGCCGGAAA
GGAAGGAAAAGGAAAGGGAAGGGAAACCGGGAGGAAGTCTTCCTCGACGC
CTGTCTCTGCTTCTGGATCTTCGTTGTCTGCAAATTAGCCAGACAGGGTC
AACAATGGTGCGGTTTCTGGGAAGGGTCCCCCTCCTGTCCGCACGGGTAG
AGAGGCGCAGTTTTAACTTGCTGGCGCCTGATGCCGATCTGGCAAGGGAG
AACGAGGGCGGAACAGTCGAGGATGTAGGAAGGAGAGGCGCGAATTTTGC
TCGCTGACGATGCTGGACAGGAGCTAAAGTTCAATGTGTCCGACGTTTTA
GAGGACGAAGTTGCTTTTTTGGTGACATAGGATTTGAGTTCTAAGCCTTT
TCCGTTGAGTGAGGCGGAACCTATACCTCGTAATATAGACGATGTTAGAC
GGTCCAAATACCGTCCGCTTTGGGAGGCGGCGAGTACGAGAGAATTGGGA
GGCCATGCTAAGATTTGAAGGTTTACTGTAGTAAGTGACCGCTAACGGAA
GAAACCGTTGAGGAGGCAGTTCAATTTTTCGTACAAAACTAACCAGATGG
GGGATGTCGTGAAATTCAAAGCCAGCTTGGTAGCTGACGGAAGGACACAA
GTCCAAGACGTGGAGTATGACGAAGGTTTTGCGCGTACCCCTTCCGCCGC
TGCTGTCAAGACGGTGTTAGCCGTAGCGGTGCAGGAGGATCTACAACTGT
TCCATGTTGACACTTAGGCGTTTGTTCAGGCGGGATTGGATCATACCTTG
TTTATGAGACTGCCTGCTGGGTGTGGCTCAATGTCGGGGAGCACTGTGAA
ATTAGACAGAGCTCTGTATGGTCTGAAACAGGCCGGCAGGCAGTGGAATA
CGCGTTTGGTGGACGAGTTGGTGGATTTTGATATGGAACAATGCCTGTCT
GAACCGGCGTGTTTCGTGAGATGATCGACGAAAAGGTTACCCTAACCCTG
TCAATACATGCGGATGGCATAATTGGTAGTGAGTAAGGAGGGTGATTGCA
GCAGTCATTCCGATGCACTCCCGGGAAAATTTCCCATGACTATCAAAGGA
AATTGACCTGGTACAACAGATATGCATTCAGTTGGGATTGGAGTAAGGGT
AGATTAATGCAGGACCAAAATGTTTTTGTCGATAGCCTCATGGAACAGTT
CGAAATCACCTGTGTCTAAACTCCCTGCGACCTCACTTGATGATCCAGGT
CCGCACCGTAAAGATGAGGAAGGTGGAGACTGCCCATTCAGGGCGGCCAT
TGGGTGCCTTATCGGGCTAGCTTCGATGACCCGCCCGGATATCGCGAATG
CTGTGAGAGCTATGGCCCGACATTCCCACAACTCTTGCCCGCGTCACTGG
TCTGGGGTTCTGACAATTCTTTCGTATCTTAACAATATCAGGTCTTTGGG
AATAATCTACCCGCGGCGGTTGGTGCTGGCCATGGACGTTACGCTGATCC
TGATTTCGCGGAGAAATCTTTAGACAGGCGTTCTGCGTCTGAGGTGGCTG
TGATGTGGGGGGGCGTTGCGGTCAGCTTTAGCAGCAATACGCAGCGCTGT
GTCACTATTTCGACTACCGAGGCGGGGGACATGGCTCTTGGAGAGGGAGC
TAAGCAGGGCATGCATGTGAAGGGTGTGCTTGCTTTCTGGCAACCGGAAT
TCTACGGTATCCATATTAGGTTGTTTGAAGACAACGCCAGGGCACAATGT
TTGGATAAAAACTCGTGGAACTCTAGCCGGAGTAGGCATATCGATGTAAG
ATACCATTTCATTCGTGATTTGGTGAGGACCAATAGGGTGTCAGCGCACA
ATGTCGGTTCAAAAGACCAGCACGCTGATATCCTCCTTTACGGATTTTTA
GAGATCATCGTTATTTTTTGTGAGTTTGTCCAACTGAATTTTTGCCCCGA
CTTTTTACGGACCATGATTAAGTAAAGCGGTAGGAAACTGGCCCAACTAG
CACCCTACGCTATTAGCGGGCATAGGTCTTGGATTGGCTGTCCAGGCGCT
GTAGTATGGAAATGTTTTTGCCCAGCTTTTGTTAGTTGTTGCGGGTGCAT
CAAGGATAGAGGTATTTGTACTTGCATCTTGGTTTTCTTTGTCTTATCTT
TATCAGATACGGATAAAAAGGGAGGGTATTTGAATATTTGTGTTGTACCT
TCATCTAGAATAGAGGAATGGGTGAGATATCGACTGCTGTGATGCTATGC
TGGAATATCGTTCATAGGCGTTATGGGCTCCGATTTCGCAGTTGCATTGA
TTTTGGTTCTTGTTGGTCTGGTTTGGTTCTGTCTGTATTTGGTTCGGCCA
GCTTGCTGGCTAGCTACCTTTGTTTTCTGGCAACATCCTCACTCACATCT
ACTTTCTCTAGACCGAACTTGTAGTCAAGAAGACGTACAAGATCTTCTTT
GCATGTCCAGGTATTACTAGGCGCTAGGAGCCTAGCAATTATCGACTATA
GTGATGAATGTTGATTCTCTAAGTACTGAATTAAGAATTTATCGAATCTG
ATATGCACGATACGCGAGCTTTTCACTTTTTGTCAGAACACCTCGCCCGT
AAGGCAAATCTCCATCTGCGGTGTGAATAACCAGTTCTCAGCTAGCCAAG
GAGGGTTTGGAACTTTACTTGCGGTACGCTGATTAACTGAGAAAGATGTA
AGCGGTAGAGGCAGACCATCCGTCACCATTACTGCCACGTAAAACGAAAA
CATCTGCCAGGCAGACCCGTCTTCTGTGGTCTAATTTTGGACTGATGAAA
AGATACAGATGAAGACGGGGGGGTATCGTGACCAGCCGAATTGTTTATTT
TCTTTCCGAACAAACACCTCTGTTGCCACCCACAACATTGCTTGTCGGAA
AGAGCACGGAAGCAGTGATAAGACTGCCGTGTGACCGATATAGGACGCGG
TGGTGACTTCCCTCCGCCTAGCGTGAGGAGCACTGGAAACTAGCTCGGTG
GCAGTTTGAAACGGACGGGTGAGTGGAAGTTCAGATATCTGCTGCTGCGT
GAGGCATTGCGTTTCTGAGGTTGCTTCCCTAGTGGTCAGGGTATTGTTCG
CGCTCACATATCCCTGCGGTGTACGTGCTGCCCGGAGATGGCTGTAGCAG
TAAGCAAATCAAGGCCTGTGGGAAGCTAGCCCCCGTCTAAAAGGAATGGA
CTGCGTCCCCATTGCTGTCTCGAGGCGTGCGGCACGGCAATAGATAGAGC
GTCAGCCGTTTCGGCTCGCGGTGAGTAGTTGAAAAAAATTACGAACGCCC
GTAACGTAAATATATGTGTTTGCTACCATCATGTCGAATTGGATCCTGCG
TTGCGAAGGAAATCTTCAACGTTTTGGATGTAGCTATGTACAGGCGTTCC
AATTGTAGCCACCGTTTTTTGCGCTCGACTGAGCACGCGAGGCCTGACTT
CATCAATCAGAGTACACCAAGGAAATCGAGTTCGATTTTTACACATTCAT
TGTGCTTCCGAATGTGTCTTGACAGCATCAACGTAAGAGTTGAATTGTTC
GCAGGAAGAAAGTCGCAAAACATGCTCTAAAATACTCGGCGAGAAATCCA
CCCTATACCGTGCGTGGATCGATCGACAATAATATCGGCAACGGGCGGGC
GAGAATCTATACTCTGCGCATTGCATACTGCGTCGTGCCACCACGGCCAT
GCATTAGTCAGCACGACCAGTGAGGCAGCGTCATCGGTAAGAAAAAGAGG
ATGCAGTGGCCAGGTTGGGTCCCTTTCCGCTATTGAATACGCAGTTCCAG
TATCATACCATATGCCTATTGCCTCATCTACCTCGAGCCAGGGAACGGCT
AGTCGTTGCTTTGAATTGTGCAATACAACGGAAAACTATATCAACTTGCC
GACTGTGAATAGTGGTCGCCCATATGCTTGTGATTACACCGCCCCACGCT
CTCCATGCCCAACCCTGAAGCCCAGCTTCCCGATAACGTACCAAGTCAGC
ACATGCTCACTGCTCTCCTGCAGTTTGTTCGATCAAGAAGCTTGATTCGG
TCAATGTGTTCTAAAGTGAACAGCGACGTAATCGCGCTTTTGCTTCTGGC
CATTATTCTACACATGGGAGCTTCGAGAGGCTATCTAGAGATCAAGCTGT
GGTGCACAATACCTCTAGGCACAGCGTTGCATCCGCCCAACGTAGGGTTG
AAGTGCTGCTCTAGTACGAGGGTACCTAGTAGTCTTTATGCCTGCTCCGA
ATAAGTGCGTTTGTTGGTATGCACGTGGCAAAAACAACGAAAAGCGAATT
CATACACATGTTATGGTTCACTTGGTGAAAGACTGTTTCGTTGCTTTCGA
ACCACACCGGTCAGGGGTACGGTTGGCCAACACAGCAACGAACATGCTTT
ATATAGTATCGATATTTTTCCTGCCATGAAGGCACCATAGCACCGATCAC
CGACAGTCAAAGGACAAAGAGCTTGCTTGTGAAAATAACTCCTGAACCTA
GGCGAAAACACTGTGTTTATCCGGTAGCATGTGCTGTTCGAATCAAGAAA
CCAATTGGCACCCTGTTGCACATACGCATTGTAGCATAGGTGCATAATAT
GCTAACATGATATATCGTTCCTATGAACCAAGTAGAGTGTGCGATTTTGA
AGGGTCTGATGCACATCCTTGTTGTTCGGTTTTGCACGTATGTTGAGCGT
TGAATTTTCGACTGGAATACCCTCTTGACCATATTACATCTCGGTCTAAC
ATAAGAGAGAGAGACCCACACCTCTTACCAACCACATCGGGAACACCCTG
AGATATCTTTTGATACCATCTCATTAGGATCATGTGAACGAATGACCCAC
CCAATTATTTCTCCATATCGTGTGCTCTACCCCTGGCGAACCCCCGTATT
GCTTTGTATTGCAATAATACCCCGTAGAGGTCCCGCCGCATGATTAATGA
GACCATACGCATACTAGGTGTATGTAATAGATGATAACGCCATGATGGTT
GAATGTGCAACAGTCTCACAACGGGTTCCATTATTCACGATGCCAAACCT
AACAGAACATATTGGTATACATTCCTCTCATTACATTACTTTGGTGGTGA
CAAAATTTATACACGTACCCCTCTCCCCCCCCCATGGTAATATTTGGATA
TATGAAGCTCCAGGGGGCGGAACAAATATGGTCGCAACGCAAGTTTGTAC
AAAACAGGGATCGTGTTCTTTCGTATAGAGGTCGTGCCCTCGTGCACGCT
CTTTTGGCTGGCTTTTATTGAACTGTGTATGTCCCCTTTCAAGTCGAAAT
ATTAGAATAAAGTGAATGAACGGTCCAAGCAACGGTTATCCGTGTCGCGT
GCTACTACACCCCCTGCATACAGTCTTATCGCTTCGTATTAAACGATATT
GTAGAGGTCCCATCGCATGACCAGTGGGGAGGTATGTGCCTAGATGTCAA
CGATATTGATCGGATATACTCCGGAGTAGAATGGTCTCACAACGGGGTTC
CGTCGCGCCAATCCTAGGGTCAAGAATGTACTTGGTCGCATTCTATAGTG
TTTTGGTCGGGACACGACCCCCCTCCATGAGGGTATTGATATATGTGAAG
CTCTGGGGAAGCGGAACAAGTATAGGGGACCTTCGACCGCTTGAGAACGG
GGTCTTGTTCTTTCGCGGAGCGATATATCGTGCCTAGACTGCCCATTTCT
TGGGCTGGCTTTACGAGACCACGTGCTCGGAGGTCAAGCTCAGTTTTCCC
CTCCCACACTGGCAACCTCCCGAAAACTAATGAGTTCCCCCGTGCAATTT
CACATGCAAGGGTTGCCGACGTAAAACGCCTTGCTTAATCGACATCACAC
GATGCATTCTATTAGCATCTCTCCATACAGCGGGCTGGTCACCTCGTAAC
ACTCCAGATACTCATGATCCAACCGTGTGACATATGATGTGCCTATTCTC
AGCCTGAGAAATGAGCCGGGTGTATGAAATTGCAATTGGGGAATTCGCAG
TACAAAAATCGCGATATCTGGTGTTCGTTGCCACTGAAAACGACACCCTC
ACCGCTGCGATTGGTTTCTACGGCTGAGGTTGTACATATGGTATATGAGA
GCCCGCGCCAGCCCATGGTACCCTCTGAGTAGACACCTAGGTTGGTTGAA
GCAACGATAATTATGTCTCCGGTCCCTGCGGCTTTGCGGAGAGAACTAGT
CGGGGTATCGATGTAGGTTTATTGGGGGAAATCAAGTTTGATATTCCATC
AACTGCATGTACGTGATTTCATAAATGTCGCCCTCATATGCTCTCTTCCA
GAACAAAATAATTTACTACGCCGCGTTGGTGGTGAACTCCCCTCTCATTG
CACTATATATATCGTATTCATACTAGTGTAGCTGACCGACACATACATCG
CTTGTCGTTGAATTCGCCCGCATGTGGGAGAAACGTGGAATACCTCGAGC
CAACCAACGCATACACAACAGGTGGTCAGAAGGATAGCTTTCGGGACATT
TGAGTCAGAGAGTACAAGGCTATCTACTTCTACACGAGAATTCCGAGGTT
GCTAGCGCCTTGATCGAACTTCGCATAAGGTGTCAAACCCCTTTGCAACG
ACAAAAATAGACACTTATTGGTGAAATAGCGTACAGTACCCCAGTATCCA
CCTGTGCACGAGCGAACCTATCGTGCGCGAAAGCCCGACGATACGGTCGT
CGATGCCCAATGTGCGTAACCTCTTTCCAACATCAACCTCACGTACTTCT
AACAGATTGGGTGTTGCAAGCGGCGGGGTCGAGGGTTTCTACTAGCAAGG
GAGTAGGTCAACTCTCACGGGTCTTCTGTCATCATGCGTGGATTATCACA
AAAAGTTCTCGGGGTTCTTCTTTGCTCTTTGTTCGGTGTACATGTAGCTC
ATGGGGACTTTCTTGACTATCCCTTGACCAACCGAGAATTGGAAATCGAG
GCCGGGTACTACGACAGGAGCGGAAAATATCTTGGGGGCATTCCGAAAGT
GAGTACTTCAATTACAATTGTTTGCCGATGTATGCGGGAGTGGGTAGAAG
CTGGTATCTGGCTTGTAGCACGTCGATTTTCCTCTGACCGCGCCGTTGGA
GTGTGAGTCCCTTCGTGTTCGATAGCTATTGGGCATTGGAGCTCTACTCA
CGCCTGCGTTAAATAGGTGTGTGTATGTGTGTGTGTGTGTGTGTGTGCGC
GCGCACACGCGTTTATACGTACCTCTCTGTATTGCAACGTAAAACTGCGG
GTAAAACGACTGACTTCCTGACCCCCTTGCCGTCGTTGAACGTTGAACAA
TGAACCTCTGAGCTCAGGTCGGCAGCGAGTACTTTCAGCGGGGACAGTGC
GTTACGCCCGTCTACGGCACATCGCCGACAGGCACGAGCAGCAGCGGTGC
GTACAACGCAACCAATTGTTTGCTATGGGAGGAGCGAAGATCGGTAGAGA
TCGACGAGGAGGGCGCCATCGTGGAGGGTGACAGCAAGGACGGTAGTGAG
TTCCGAGTTTGCTCATGCTACGAGCTGACAGAGAATAATAACTGTTTACA
ATGGAATTGTAACCAAGTAATGGTGGACCGAGATACGGAGTGCGTAGACA
ACACCGAATTTTACAACCGAAGGCTGAGACAAGTGTGCTATACCGTCATC
AACATTTCGTCCGGTCGCTGTCGCTGCGACAACGAAACCGAGCTGCAATT
CTGTACGATCTGGTCGTGCGAGGAATACCTCGGCAATGATATTGTCTACG
AGACAAATGAATGCGTGGAGATATCGGTGTCGAGACAACACTGTAATGCG
TGGACGGCAATATTGATATCATCAGAGGGTGCGTCAGCCAGGGTATGTGA
GTGCGTCGCGGAGGAGTTCGGGGATGGAATTTGCTCGATGTGGGAGTGTA
AAGAGAAAAGATCCAACTCGTGCGAGCGTTGCAACGACATGGCACTGTCC
GTGGCCTGCTTTGGGGTCTTGGGTTTACTGGGCGTTTTGCAGCTCATTAA
GTCCTTCCACGCGAAGGAGTTCTTGAGCTGTTGCGTGGTGCTCCGTGTAC
TGTGGATAATAGCTGCAGCTGGTGCAGCCATCTTTTACGGAGGCCAAACA
GGGGGCATGTACGTGGGGATCATGTGGGTTGGAGTAGGTGGACTCTACGC
CTTCTGCTGTCGCCCAACGAAAGACTAAAATGCGCAACTATGGACCCCTT
CGATCAAGCGCGACATGAAACCGACAGGAATCCTGTGTGCGAGGTCAGAG
CCTCAGCTAGCGAAGGGAAGCGATAGCTAACATGCCCACTCCTGCTTCAG
GAAGAGAGGCGGAGAGAGGCACTCCGTGTAAACATTCCGCTATCAGGCAT
CTCCGAGAGCTGGATTCCTCACGTGGCGTACCAGTCTATGCGCTGTGAGC
GAGTCACTGGCTTCAGGGTATGTCTTAAAGCGGGCCGAGACGCTCGTAGG
ATGCGCGCGGCACCGTGCGAGGGCGCGACAGGACGCATGGGCAGACTATA
TGTGCTGAACTCGAGAAGCCATTGTCACGTTCGGAGGATATCTGCTATAG
GCAGTGGAGATTGAAAGATGCCTGGCAACAAGCGGCGAAAAGATAATCCC
AGTAGGGAGGGGAGGTGGGATGCTGTATAGTGTTCGTGTAATAGGACGCA
CATGCGCTTCTTTTCGTCAGCCTTGATTATGTGTTCATGTAGCTTACGTT
TTACCTTTCGTCGGATTTGTGTATGTAGGGTGTGTTGACCATGGCCAGTA
TTTGTGTATGGCATTCAATTAAATACGAGGGATTGTTTACAGTAGCCCCG
GACAGAGTTCCCTGGGTAGTACGTTTTTTTGACATACGGTGTTCGCCATT
CGTTGCTCTTTTTACGGCACCCCGCCCCCCCCCACTGTTTCTGGAACAGG
GACAGTCTGAGTTTATGGGGCAAATTTAGCGAGAATTTTCACAAGAGTTC
CGCACGATCTTCTGTGTATTTGTTGCCCTCTGTTGTGTTTGGAGCTGCAA
GAGTGTACGCTCAGGCACGAGCAGAGGGACCCATGGAATTACGTGTGACT
ACTACTGTGGCTGTATTGGTTCTCGTTTTATTTCTGAGAGGGAAGTGACA
CGAGAAATTGAGCCTCAAATTCTTATTGGGTGATTTATTATCAGTGGGCC
CACACTGTAGTAGCAGATGATGGGCGTGTTATTTCCCATGTAATGGCGAG
TTGGATATATTGTATCAGTATCTCGTATGGTGGTGGTGGTGGTAGTGAAG
GTGGTGCTGCTGCTGTGTGTCATGAGTGATAGTTGTCCCATCCAGCGCAT
CAACCGCGCCCAGACACGTCATGGTGCTGAAGTGTGTTAAATGATCTTTT
GTTCAGTAAGATGTATTTGGAAGGTCGCTGCAATTCGTCCACTTCCTTCC
ACTATAGGAGCCGCCATCGGCTGCCGCAATCCTTTGCATTAGGGTGAAGG
AAATGGATTATACTAGAGCGCATTAACACCAGATATACTATCCCAGTCAT
GCACTATTTTTTTAGATCCATCACAG

Coding sequence (CDS) from alignment at H-paniculata_contig3427:1175..10750-

>mRNA_H-paniculata_contig3427.9155.1 ID=mRNA_H-paniculata_contig3427.9155.1|Name=mRNA_H-paniculata_contig3427.9155.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=2052bp|location=Sequence derived from alignment at H-paniculata_contig3427:1175..10750- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGCGTGGATTATCACAAAAAGTTCTCGGGGTTCTTCTTTGCTCTTTGTT
CGGTGTACATGTAGCTCATGGGGACTTTCTTGACTATCCCTTGACCAACC
GAGAATTGGAAATCGAGGCCGGGTACTACGACAGGAGCGGAAAATATCTT
GGGGGCATTCCGAAAATGCGTGGATTATCACAAAAAGTTCTCGGGGTTCT
TCTTTGCTCTTTGTTCGGTGTACATGTAGCTCATGGGGACTTTCTTGACT
ATCCCTTGACCAACCGAGAATTGGAAATCGAGGCCGGGTACTACGACAGG
AGCGGAAAATATCTTGGGGGCATTCCGAAAGTCGGCAGCGAGTACTTTCA
GCGGGGACAGTGCGTTACGCCCGTCTACGGCACATCGCCGACAGGCACGA
GCAGCAGCGGTGCGTACAACGCAACCAATTGTTTGCTATGGGAGGAGCGA
AGATCGGTAGAGATCGACGAGGAGGGCGCCATCGTGGAGGGTGACAGCAA
GGACGGTAGTGAGTTCCGAGTTTGCTCATGCTACGAGCTGACAGAGAATA
ATAACTGTTTACAATGGAATTGTAACCAAGTAATGGTGGACCGAGATACG
GAGTGCGTAGACAACACCGAATTTTACAACCGAAGGCTGAGACAAGTGTG
CTATACCGTCATCAACATTTCGTCCGGTCGCTGTCGCTGCGACAACGAAA
CCGAGCTGCAATTCTGTACGATCTGGTCGTGCGAGGAATACCTCGGCAAT
GATATTGTCTACGAGACAAATGAATGCGTGGAGATATCGGTGTCGAGACA
ACACTGTAATGCGTGGACGGCAATATTGATATCATCAGAGGGTGCGTCAG
CCAGGGTATGTGAGTGCGTCGCGGAGGAGTTCGGGGATGGAATTTGCTCG
ATGTGGGAGTGTAAAGAGAAAAGATCCAACTCGTGCGAGCGTTGCAACGA
CATGGCACTGTCCGTGGCCTGCTTTGGGGTCTTGGGTTTACTGGGCGTTT
TGCAGCTCATTAAGTCCTTCCACGCGAAGGAGTTCTTGAGCTGTTGCGTG
GTGCTCCGTGTACTGTGGATAATAGCTGCAGCTGGTGCAGCCATCTTTTA
CGGAGGCCAAACAGGGGGCATGTACGTGGGGATCATGTGGGTTGGAGTAG
GTGGACTCTACGCCTTCTGCTGTCGCCCAACGAAAGACTAAGTCGGCAGC
GAGTACTTTCAGCGGGGACAGTGCGTTACGCCCGTCTACGGCACATCGCC
GACAGGCACGAGCAGCAGCGGTGCGTACAACGCAACCAATTGTTTGCTAT
GGGAGGAGCGAAGATCGGTAGAGATCGACGAGGAGGGCGCCATCGTGGAG
GGTGACAGCAAGGACGGTAGTGAGTTCCGAGTTTGCTCATGCTACGAGCT
GACAGAGAATAATAACTGTTTACAATGGAATTGTAACCAAGTAATGGTGG
ACCGAGATACGGAGTGCGTAGACAACACCGAATTTTACAACCGAAGGCTG
AGACAAGTGTGCTATACCGTCATCAACATTTCGTCCGGTCGCTGTCGCTG
CGACAACGAAACCGAGCTGCAATTCTGTACGATCTGGTCGTGCGAGGAAT
ACCTCGGCAATGATATTGTCTACGAGACAAATGAATGCGTGGAGATATCG
GTGTCGAGACAACACTGTAATGCGTGGACGGCAATATTGATATCATCAGA
GGGTGCGTCAGCCAGGGTATGTGAGTGCGTCGCGGAGGAGTTCGGGGATG
GAATTTGCTCGATGTGGGAGTGTAAAGAGAAAAGATCCAACTCGTGCGAG
CGTTGCAACGACATGGCACTGTCCGTGGCCTGCTTTGGGGTCTTGGGTTT
ACTGGGCGTTTTGCAGCTCATTAAGTCCTTCCACGCGAAGGAGTTCTTGA
GCTGTTGCGTGGTGCTCCGTGTACTGTGGATAATAGCTGCAGCTGGTGCA
GCCATCTTTTACGGAGGCCAAACAGGGGGCATGTACGTGGGGATCATGTG
GGTTGGAGTAGGTGGACTCTACGCCTTCTGCTGTCGCCCAACGAAAGACT
AA