mRNA_H-paniculata_contig3426.9153.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig3426.9153.1 vs. uniprot
Match: D8LJ76_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJ76_ECTSI) HSP 1 Score: 273 bits (698), Expect = 1.500e-85 Identity = 205/390 (52.56%), Postives = 245/390 (62.82%), Query Frame = 1
Query: 10 MPPG--YEGEKVGRSSQGSDDDMAEFNRNVGKVIETLRHDYSRMFVEELDFDIYTEDLQLIDPSGVVLSGIKPYQRLFASLRFLRQVLINDVSTSFRLSYDASRQQVRICWHFVLDARA-AERPLHVDGISVYSLNSVGIVRKHAIETIIVNGTPVKPPFAQAWINLPSWLGEGLQGGAVRAPGLSSSIGLAPFRARTGREGVDTLGVFGGGTGEDRAIRSNLVSLNPAPSSDGLEGKRLRAQGYRSAVGVXXXXXXXXXXXXEDVEKRSRVSSPSEGDWPSARHDAQNGDEGEQDTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSLWPI-LDTPWGCETSFDCSASQVCCDFVVVKFCCSNGIMQPLPGDVIPVYIPIPGRGRIELD 1167
MP G YEGEK + + + EFN N+GKVI+TLR DY+ M E L+F+IYT DLQL DPSGVVL+G+ Y+R+F + RF+R+ L++DVST FRLSYD SRQQVRI WH VLDA RP+H+DG SVY L++ G+VR+H +ETIIVNGTPVKPPFAQAW+ LPSW+ +G GG APG+ S + + G + + G G +R I +L A + GL G R A + XXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXXXXXXXX +WPI P CETSFDC+ VCCD VVVK CCSNG+MQ PGD+IP IPIPGRGR ELD
Sbjct: 1 MPAGEIYEGEKNEKEKR----EQTEFNTNLGKVIDTLREDYATMLDEPLNFEIYTPDLQLRDPSGVVLTGLPAYKRMFGTFRFVRKTLVHDVSTVFRLSYDGSRQQVRITWHLVLDATPMVVRPVHLDGTSVYGLSTEGLVRRHDVETIIVNGTPVKPPFAQAWMQLPSWVTQGRSGGVAGAPGMIS-VSSSSGDVWGGMDDFNRSGRRRSGGNFERRIPVDLSGT--AMAFQGLAGVR--------AASITRXXXXXXXXXXXXXXXXXXXXXXX---------------------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXKGMWPIDYKGPLACETSFDCTGGYVCCDLVVVKICCSNGVMQRKPGDLIPSLIPIPGRGRTELD 354
BLAST of mRNA_H-paniculata_contig3426.9153.1 vs. uniprot
Match: A0A6H5JCH5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCH5_9PHAE) HSP 1 Score: 261 bits (667), Expect = 6.690e-79 Identity = 210/441 (47.62%), Postives = 251/441 (56.92%), Query Frame = 1
Query: 1 RTPMPPG--YEGEKVGRSSQGSDDDMAEFNRNVGKVIETLRHDYSRMFVEELDFDIYTEDLQLIDPSGVVLSGIKPYQRLFASLRFLRQVLINDVSTSFRLSYDASRQQ---------------------------------------VRICWHFVLDARA-AERPLHVDGISVYSLNSVGIVRKHAIETIIVNGTPVKPPFAQAWINLPSWLGEGLQGGAVRAPGLSSSIGLAPFRARTGREGVDTLGVFGGGTGEDRAIRS---------NLVSLNPAPSSDGLEGKRLRAQGYRSAVGVXXXXXXXXXXXXEDVEKRSRVSSPSEGDWPSARHDAQNGDEGEQDTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSLWPI-LDTPWGCETSFDCSASQVCCDFVVVKFCCSNGIMQPLPGDVIPVYIPIPGRGRIELD 1167
R+PMP G YEGEK + + + AEFN N+GKVI+TLR DY M E L+FDIYT DLQL DPSGV+L+G+ Y+R+F + RF+R+ L++DVST FRLSYD SRQQ VR+ WH VLDA RP+H+DG SVY L++ G+VR+H +ETIIVNGTPVKPPFAQAW+ LPSW+ +G GG APG++S R + D G GG E R L + A + +G L A G+ ++ XXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXXXXXXXX +WPI P CETSFDC+ VCCD VVVK CCSNG+MQ PGD+IP IPIPGRGR ELD
Sbjct: 86 RSPMPAGEIYEGEKKEKEKR----EQAEFNTNLGKVIDTLREDYPTMLDEPLNFDIYTPDLQLRDPSGVILTGLPAYKRMFGTFRFVRKTLVHDVSTVFRLSYDGSRQQDDEQLLVHPCEMQPWTGRNDWPSVIGSVGNNAPSSRGRVVRVTWHLVLDATPMVARPVHLDGTSVYGLSTEGLVRRHDLETIIVNGTPVKPPFAQAWMQLPSWVTQGRSGGVAGAPGMTSVSSSGGVRGEI--DDFDRSGRRSGGKFERRIPMDLSGTAMAFQGLAEVRAASITRRRKGL-LAAVGFDASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKGMWPIDYKGPLACETSFDCTGGYVCCDLVVVKICCSNGVMQRKPGDLIPSLIPIPGRGRTELD 519
BLAST of mRNA_H-paniculata_contig3426.9153.1 vs. uniprot
Match: A0A6H5KRU5_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KRU5_9PHAE) HSP 1 Score: 219 bits (558), Expect = 4.780e-63 Identity = 146/378 (38.62%), Postives = 198/378 (52.38%), Query Frame = 1
Query: 76 EFNRNVGKVIETLRHDYSRMFVEELDFDIYTEDLQLIDPSGVVLSGIKPYQRLFASLRFLRQVLINDVSTSFRLSYDASRQQVRICWHFVLDARAAERPLHVDGISVYSLNSVGIVRKHAIETIIVNGTPVKPPFAQAWINLPSWLGEGL----QGGAVRAPGLSSSIGLAP---FRARTGREGVDTLGVFGGGTGEDRAIRSNLV---SLNPAPSSDGLE--GKRLRAQGYRSAVGVXXXXXXXXXXXXEDVEKRSRVSSPSEGDWPSARHDAQN--GDEGEQDTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSLWPILDTPWGCETSFDCSASQVCCDFVVVKFCCSNGIMQPLPGDVIPVYIPIPGRGRIELD 1167
+F N+GKVI TLR DY R+F + FDI+TE+++L DP+GV GI Y+R+FA+LRF RQ +ND +T+FRL+YD S+QQVR+ W+ VL +A +RP++VDGIS Y +NS G+ +H +ET++VNG V+PPFA AWINLP+W+ G G P + IG AP F + G E D +G D +R + + S +DG+ G XXXXXXXXXXXX +++A G +G + CETS+DC+ VCCDFV++K CCSNGI QP G++IP +PIPGRGR E D
Sbjct: 133 DFEVNLGKVISTLREDYPRIFFDPPAFDIFTEEIELRDPTGVAFRGISNYKRVFATLRFFRQTFMNDATTTFRLTYDWSKQQVRVTWNVVLQLKARQRPIYVDGISAYHINSDGLAHRHDLETVVVNGRAVEPPFAYAWINLPAWVSRGAVAKPSGAGAALPTPHAVIGGAPTQLFEQQQG-EAEDAVGAMFDAARTDSELRGDYMQALSTVLMMDTDGVSESGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKNNAGGWFGSKGAE-----------------------------------------LACETSWDCTGGMVCCDFVLLKVCCSNGIRQPKFGELIPSLVPIPGRGRNEND 468
BLAST of mRNA_H-paniculata_contig3426.9153.1 vs. uniprot
Match: A0A7S1ZVV7_9STRA (Hypothetical protein (Fragment) n=3 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S1ZVV7_9STRA) HSP 1 Score: 117 bits (293), Expect = 4.360e-26 Identity = 60/144 (41.67%), Postives = 85/144 (59.03%), Query Frame = 1
Query: 64 DDMAEFNRNVGKVIETLRHDYSRMFVEELDFDIYTEDLQLIDPSGVVLSGIKPYQRLFASLRFLRQVLI--NDVSTSFRLSYDASRQQVRICWHFVLDARA----AERPLHVDGISVYSLNSVGIVRKHAIETIIVNGTPVKPP 477
D+ EF N+G+ ++ LR DY M V DF+IY +D+++IDPSGV L G+ Y++ F+ + + + +FRL YDA R+ +R+ W+ L R LHVDGISVY LN GIV +H +E I+VN PVK P
Sbjct: 94 DERREFEINLGRAVDRLRKDYPDMLVANPDFEIYHDDIEVIDPSGVKLHGLGNYEKAFSFIHAVINFFYCKEESGLTFRLHYDAERRNIRVSWNAFLVPRTIYGGVRNKLHVDGISVYELNREGIVMRHKLERILVNNVPVKEP 237
BLAST of mRNA_H-paniculata_contig3426.9153.1 vs. uniprot
Match: A0A7S2VCF0_9STRA (Hypothetical protein n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S2VCF0_9STRA) HSP 1 Score: 113 bits (282), Expect = 1.700e-25 Identity = 61/146 (41.78%), Postives = 89/146 (60.96%), Query Frame = 1
Query: 52 QGSDDDMAEFNRNVGKVIETLRHDYSRMFVEELDFDIYTEDLQLIDPSGVVLSGIKPYQRLFASLR-FLRQVLINDVSTSFRLSYDASRQQVRICWHFVLDARAA-ERPLHVDGISVYSLN-SVGIVRKHAIETIIVNGTPVKPPF 480
QG D+ E+ NVGK ++ LR D + E+ DF IY +++++IDPSGV L+G+K Y+ FA + F+R FR+ YD +R +RI W+ VL + RPLHVDGIS Y L+ G V +H IE +++N +PV PP+
Sbjct: 66 QGIADERKEYQMNVGKAMDVLRSDMRDILTEKPDFSIYDKNIEVIDPSGVRLNGLKQYKSAFAFFQTFIRFWFSEKSGLQFRMVYDFARCSIRISWNVVLVPKVPLGRPLHVDGISYYQLDRKSGKVVEHKIENLLINNSPVAPPY 211
BLAST of mRNA_H-paniculata_contig3426.9153.1 vs. uniprot
Match: A0A7S4A516_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4A516_9STRA) HSP 1 Score: 115 bits (288), Expect = 2.730e-25 Identity = 52/153 (33.99%), Postives = 91/153 (59.48%), Query Frame = 1
Query: 73 AEFNRNVGKVIETLRHDYSRMFVEELDFDIYTEDLQLIDPSGVVLSGIKPYQRLFASLRFLRQVLINDVSTSFRLSYDASRQQVRICWHFVLDARAAERPLHVDGISVYSLNSVGIVRKHAIETIIVNGTPVKPPFAQAWINLPSWLGEGLQG 531
+EF N+G+ I+ LR D EL +DIY +++QL DPSGV G++ Y++ F +R R+V+I+ V +F+L YD S++ +++ W+ AR + + +VD S + L+ G + KH ++ + V G P+ PP++ W+ ++ GL G
Sbjct: 78 SEFELNLGRAIDALRSDVPAFADRELSWDIYADNVQLADPSGVQTRGLQNYKQFFGVIRMFRRVMIDKVDITFKLRYDWSKKIIKVTWYSKWYARGSSKAAYVDATSAFHLDEQGKIFKHVVDRVQVGGRPLSPPYSVGWLAFREYVLAGLDG 230
BLAST of mRNA_H-paniculata_contig3426.9153.1 vs. uniprot
Match: A0A0M0JBU2_9EUKA (Uncharacterized protein n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0JBU2_9EUKA) HSP 1 Score: 115 bits (288), Expect = 4.450e-25 Identity = 100/373 (26.81%), Postives = 151/373 (40.48%), Query Frame = 1
Query: 79 FNRNVGKVIETLRHDYSRMFVEELDFDIYTEDLQLIDPSGVVLSGIKPYQRLFASLRFLRQVLINDVSTSFRLSYDASRQQVRICWHFVLDARAAERPL-----------HVDGISVYSLNSVGIVRKHAIETIIVNGT-PVKPPFAQAWINLPSWLGEGLQGGAVRAPGLSS-SIGLAPFRARTGREGVDTLGVFGGGTGEDRAIRSNLVSLNPAPSSDGLEGKRLRAQGYRSAVGVXXXXXXXXXXXXEDVEKRSRVSSPSEGDWPSARHDAQNGDEGEQDTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSLWPILDTPWGCETSFDCSASQVCCDFVVVKFCCSNGIMQP-----LPGDVIPVYIPIP 1143
F N G+ I+ LRHDY R+F E D I+T++++L DPSG L+G K Y+R+F +LRFLR+ + D RL D + +R+ W+ L R L H+DG+SVY L+ G++R+H +E I++ G P+ P A+ +W G P + L F + G G G + + R + P S+ E RA R+ ED K+ R+ D + + ++G L+ L P CETS+DC A VCCD + CC+ G++ P + G + IPIP
Sbjct: 79 FKLNQGRAIDVLRHDYPRLFTERPDMSIFTDNIELHDPSGKRLAGKKQYERVFDALRFLRRTTMQDAQVGIRLVADD--KSIRVRWNAKLWMRDPATGLTTLVNGEPALVHIDGVSVYDLDKDGLIRQHRLENIVLTGQEPLATPIQLAF----AWPATGYATPQAAVPFFQPLADALLNFGFSSTSSGASEAGTEGTESEDGRRAAPTRRAPPPQASASDDETPLERAARERA----------------EDAAKQQRLR-----DLRTPKTAPKSG------------------------------------VDLFG-LTGPQSCETSYDCDAPMVCCDLLFATVCCTGGLLIPTADRRMQGSLQRQAIPIP 387
BLAST of mRNA_H-paniculata_contig3426.9153.1 vs. uniprot
Match: A0A1Z5KJP1_FISSO (Uncharacterized protein n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KJP1_FISSO) HSP 1 Score: 106 bits (265), Expect = 2.890e-23 Identity = 55/142 (38.73%), Postives = 86/142 (60.56%), Query Frame = 1
Query: 64 DDMAEFNRNVGKVIETLRHDYSRMFVEELDFDIYTEDLQLIDPSGVVLSGIKPYQRLFASLR-FLRQVLINDVSTSFRLSYDASRQQVRICWHFVLDARAA-ERPLHVDGISVYSLNSV-GIVRKHAIETIIVNGTPVKPPF 480
D+ EF ++G+ ++TLR D + E DF IY ++L+++DPSGV L G++ Y+ A L+ F R R+ YD R +RI WH VL + RPLHVDGIS+Y+L+ G++ +H IE +++N +P +PP+
Sbjct: 56 DERQEFQIHLGRAMDTLRKDMQNILTELPDFSIYHDELEVLDPSGVQLIGLEKYKSAIAFLQTFCRFWFAPKPVVQHRMVYDFCRSSIRIAWHAVLVPKVPWGRPLHVDGISLYTLDPTSGLISQHKIEKLVINQSPAQPPY 197
BLAST of mRNA_H-paniculata_contig3426.9153.1 vs. uniprot
Match: A0A7S2UHH9_9STRA (Hypothetical protein n=2 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UHH9_9STRA) HSP 1 Score: 110 bits (276), Expect = 3.850e-23 Identity = 118/396 (29.80%), Postives = 172/396 (43.43%), Query Frame = 1
Query: 55 GSDDDMAEFNRNVGKVIETLRHDYSRMFVEELDFDIYTEDLQLIDPSGVVLSGIKPYQRLFASLRFLRQVLINDVST--SFRLSYDASRQQVRICWHFVLDAR----AAERPLHVDGISVYSLNSV-GIVRKHAIETIIVNGTPVKPPFAQAWINLPSWLGEGLQGGAVRAPGLSSSIGLAPFRARTGREGVDTLGVFGGGTGEDRAIRSNLVSLNPAPS----SDGLEGKR-LRAQGYRSAVGVXXXXXXXXXXXXEDVEKRS--------RVSSPSEGDWPSARHDAQNGD-EGEQDTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSLWPILDTPWGCETSFDCSASQVCCDFVVVKFCCSNGIM--QPLP-GDVIPV-------YIPIPGR 1149
G D+ EF +GK ++TLR DY M + D+ IY DL+++DPSGV L G+K Y+ F + + + +FRL YD +R +R+ W+ L + + LHVDGISVY + G++ +H +E +++N V+P S I A RA T EG LGV G + R NL+ + S SD ++G + L A S G E +EK++ + +P E +AQ E +Q+ XXXXXX S++ DT CE+++DC+ QVCCDF V K CCS+G+M LP G + PV Y P+ GR
Sbjct: 107 GIGDERREFEMKLGKAVDTLRKDYPAMLTKNPDYTIYHGDLEVVDPSGVKLHGLKNYKNAFMLIHAVINFFYCPERSLITFRLVYDQARNNIRVSWNAELVPKLIFGGVKTTLHVDGISVYVMEKTSGLITQHRVERLLINDAHVRP---------------------------KSGIFYALTRAVTDMEGPPVLGVDGAPFHFE--FRQNLLPIPSGKSLFDASDSIKGVQPLYAMSSTSDGGSDGSMAFDE----EALEKKNISRKKRGLKALTPDE----YMEFEAQTRQLELQQEQKANDIAXXXXXXTALEGEKKKSNFLGKMMGSVFK--DT---CESNYDCARPQVCCDFKVKKVCCSSGMMVSNRLPRGAMAPVRVVAKAGYPPLDGR 460
BLAST of mRNA_H-paniculata_contig3426.9153.1 vs. uniprot
Match: A0A7S4A2R8_9STRA (Hypothetical protein (Fragment) n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4A2R8_9STRA) HSP 1 Score: 103 bits (258), Expect = 3.390e-22 Identity = 49/136 (36.03%), Postives = 77/136 (56.62%), Query Frame = 1
Query: 76 EFNRNVGKVIETLRHDYSRMFVEELDFDIYTEDLQLIDPSGVVLSGIKPYQRLFASLRFLRQVLINDVSTSFRLSYDASRQQVRICWHFVLDARAAERPLHVDGISVYSLNSVGIVRKHAIETIIVNGTPVKPPFA 483
E+ N GK I+ L D +R ELD+ IY+E +QL DP+GV G+ Y+R F +R R ++++DVS RL D + ++ ICW+ A++P+ +D +S YSL+ G V H ++ + +NG P A
Sbjct: 96 EYELNRGKAIDALNADATRFADAELDWSIYSEQIQLADPTGVRARGLANYKRFFQLVRLFRSLMVDDVSVRHRLRVDDANGRIVICWYSTWRTSMAKKPIQIDAVSYYSLDDRGFVEAHEVDRVEINGKRRSPETA 231 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig3426.9153.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig3426.9153.1 >prot_H-paniculata_contig3426.9153.1 ID=prot_H-paniculata_contig3426.9153.1|Name=mRNA_H-paniculata_contig3426.9153.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=387bp MPPGYEGEKVGRSSQGSDDDMAEFNRNVGKVIETLRHDYSRMFVEELDFDback to top mRNA from alignment at H-paniculata_contig3426:10971..15644- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig3426.9153.1 ID=mRNA_H-paniculata_contig3426.9153.1|Name=mRNA_H-paniculata_contig3426.9153.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=4674bp|location=Sequence derived from alignment at H-paniculata_contig3426:10971..15644- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig3426:10971..15644- >mRNA_H-paniculata_contig3426.9153.1 ID=mRNA_H-paniculata_contig3426.9153.1|Name=mRNA_H-paniculata_contig3426.9153.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=2322bp|location=Sequence derived from alignment at H-paniculata_contig3426:10971..15644- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |