mRNA_H-paniculata_contig3420.9138.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig3420.9138.1 vs. uniprot
Match: D8LBU6_ECTSI (Similarity to cobalamin synthesis protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LBU6_ECTSI) HSP 1 Score: 494 bits (1273), Expect = 2.640e-160 Identity = 322/638 (50.47%), Postives = 379/638 (59.40%), Query Frame = 3
Query: 300 MCIFCERAKASLDDPLAGLGLDTEDLFGYDAHSSSL------KPRDSKVGRQRWEATL--RQKREAERCEELRQRARLPVTVITGFLGAGKTTFVNHVLSSRHGRRLAVIENEFGEIAVDDELLGDGGVERAEEAQQVILMPNGCMCCRVRGDLVAALQRLIMGTAGVTTTEEASNSPIGVFNGREGVSTADKADKATSNND------------------------HDQGGAGTTGQTPLPSMQKATKLDGVIIECSGLDELAPVLQ----TFFADPFVQGYMRLDAVVCLCDSPRLLHTLISSSASRENATIGESSSSATSGEQVAGAEDASSGRSNDESAALVMSQLALSDRILLNKSDLLTFDEGQSLVKAVKGHFPGALVTQCVRGGVDIDLVLGVEGFSLDKALEMDRHFADVLMDS--DSTVAPQHSHRHGNATELDPKDSSHDDIGGHETGDTAKGRQHEH--DRLGATSVGIELTDGPIDWVKFKKWLKGFLEEE-QERIWRLKGVLWTSTPGSGASGYSTTTAWGWGAGSRTVVQGLYGHFESELGRWPAGSTRRSRLVFIGDLPPIVQESLKVGVRSCIA----QPRPXXXXXXRKSMATSGGEASGAGFANRLGAVKFGGRDDDLLL 2078
MCIFCERA+ASLDDPLAGL + + G+DA SS+ R ++ R EATL RQKREAERCEEL++RARLPVTVITGFLGAGKTTFVNH+LS+RHGR+LAVIENEFGE+A+DD LLGDGGVER EEAQQVILMPNGCMCCRVRGDLV AL+RLI V+ +E AS + +G T +ADK+ D AG P P++ A +LDG+I+ECSGLDELAPVLQ + P +G TL V SQLALSDR+LLNKSDL++ +G +LV AVK +FPGA VT+C RG VD+DLVLGVE FSLDKALEMD+HFAD+L D +S H ++ GR H H DRLGA SVG+E+ +GPIDW KF WLKGFLE+E +E IWRLKGVLWT+ A+G T WGWGAG RTVVQGLYGHFESE+ WPAG+TR SR+VFIGDL P VQE+L+ GVRSC+A +P XXXXXX FA+RLGAVKFGG +DL L
Sbjct: 1 MCIFCERARASLDDPLAGL----DGVGGWDADSSTXXXXXXXSSRFNRGPRGSREATLTLRQKREAERCEELKRRARLPVTVITGFLGAGKTTFVNHLLSARHGRKLAVIENEFGEVAIDDALLGDGGVERGEEAQQVILMPNGCMCCRVRGDLVDALKRLI-----VSASERAS-----LGDGDAPQQTQQEADKSXXXXXXXXXXXXXXXXXXXXXXXXEAAVARDTATAGGVEAAPAPAVAGA-QLDGIILECSGLDELAPVLQGNGDAKSSTPVEEGAEXXXXXXXXXXXXXXXXTL-------------------------------------------VKSQLALSDRVLLNKSDLISPAQGDALVDAVKANFPGAAVTRCERGKVDVDLVLGVESFSLDKALEMDKHFADILADKKKNSDKHDGHXXXXXXXXXXXXXXXXXXXXXXXXXXXSSPGRDHRHAHDRLGAQSVGVEVAEGPIDWTKFTSWLKGFLEKEGEELIWRLKGVLWTTA----ANGSGAATTWGWGAGRRTVVQGLYGHFESEVSDWPAGATRVSRMVFIGDLSPRVQEALRAGVRSCVAVRRARPPXXXXXXXXXXXXXXXXXXXXXXFASRLGAVKFGGGGNDLFL 576
BLAST of mRNA_H-paniculata_contig3420.9138.1 vs. uniprot
Match: A0A835ZKA2_9STRA (CobW/HypB/UreG, nucleotide-binding domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZKA2_9STRA) HSP 1 Score: 241 bits (615), Expect = 2.720e-65 Identity = 187/557 (33.57%), Postives = 248/557 (44.52%), Query Frame = 3
Query: 300 MCIFCERAKASLDDPLAGLGLDTEDLFGYDAHSSSLKPRDSKVGRQRWEATLRQKREAERCEELRQRARLPVTVITGFLGAGKTTFVNHVLSSRHGRRLAVIENEFGEIAVDDELLGDGGVERAEEAQQVILMPNGCMCCRVRGDLVAALQRLIMGTAGVTTTEEASNSPIGVFNGREGVSTADKADKATSNNDHDQGGAGTTGQTPLPSMQKATKLDGVIIECSGLDELAPVLQTFFADPFVQGYMRLDAVVCLCDSPRLLHTLISSSASRENATIGESSSSATSGEQVAGAEDASSGRSNDESAALVMSQLALSDRILLNKSDLLTFDEGQSLVKAVKGHFPGALVTQCVRGGVDIDLVLGVEGFSLDKALEMDRHFADVLMDSDSTVAPQHSHRHGNATELDPKDSSHDDIGGHETGDTAKGRQHEHDR------LGATSVGIELTDGPIDWVKFKKWLKGFLEEEQE-RIWRLKGVLWTSTPGSGASGYSTTTAWGWGAGSRTVVQGLYGHFESELGRWPAGSTRRSRLVFIGDLPPIVQESLKVGVRSCIAQ 1949
MC FCERAK+ LDDP Y A S+ +++ EAERC LR R R PVTVI GFLG+GKTT +NHVL + HG RLAV+ENE G +AVDDELL D A +V+LMPNGC+CCR RGDL AL+RL+ LDG+I+E SG E+APVLQTFFAD FVQG ++LD+VVC+CD+PRL L+ R G++++ A++ ++ A+ QLAL+D +LLNK+DL+ D +L ++ A VT+CVRG VD+ +L FSL +A+ D F +S +G + G E + G +D + W G R+WR+KGVLW G GA G R V+QG+ GH E E G WP G RRSR+V IG L + L+ +R +A+
Sbjct: 1 MCQFCERAKSQLDDP-------------YGASQSAPLSAAARM-------------EAERCSALRSR-RTPVTVICGFLGSGKTTLLNHVLRAPHGLRLAVLENEVGAVAVDDELLSDA--REAALGPEVVLMPNGCLCCRTRGDLRDALRRLVERQQXXXXXXXXXXXXX-----------------------------------XXXXXXXXXLLDGIIMELSGASEVAPVLQTFFADDFVQGALQLDSVVCVCDAPRLAQQLLPPQQQR--------------GDELSAEVGAAAAAAH----AITAEQLALADTVLLNKADLVDPDTLAALRASLSASMAAAAVTECVRGAVDVRRLLNTGAFSLSRAVAADDAFLAGGSYGNSNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAVGLRTAGAEHSRGAVDTARVVDWAHGVXXXXXAARVWRIKGVLW----GDGAGGRGALAR-------RVVLQGVGGHVEVEEGDWPPGRPRRSRIVLIGPL----SDELEAELREALAR 460
BLAST of mRNA_H-paniculata_contig3420.9138.1 vs. uniprot
Match: W7TBF7_9STRA (Cobalamin (Vitamin B12) biosynthesis CobW n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TBF7_9STRA) HSP 1 Score: 192 bits (489), Expect = 1.090e-48 Identity = 178/571 (31.17%), Postives = 243/571 (42.56%), Query Frame = 3
Query: 459 QKREAERCEELRQRARLPVTVITGFLGAGKTTFVNHVLSSRHGRRLAVIENEFGEIAVDDELLGDGGVE-------------RAEEAQQVILMPNGCMCCRVRGDLVAALQRLIMGTAGVTTTEEASNSPIGVFNGREGVSTADKADKATSNNDHDQGGAGTTGQTPLPSMQKATKLDGVIIECSGLDELAPVLQTFFADPFVQGYMRLDAVVCLCDSPRLLHTLISSSASRENATIGESSSSATSGEQVAGAEDASSGRSNDESAALVMSQLALSDRILLNKSDLL-TFDEGQSLVKAVKGHF----------PGALVTQCVRGGVDIDLVLGVEGFSLDKALEMDRHF-ADVLMDSDSTVAPQHSHRHGNATELDPKDSSHDDIGGHETGDTAKGRQHEHDRLGATSVGIELTDGPIDWVKFKKWLK-----------------GFLEEEQER--------------------------IWRLKGVLWTS--TPGSGASGYSTTTAWGWGAGSRTVVQGLYGHFE--SELGRWPAGSTRR-SRLVFIGDL--PPIVQESLKVGVRSCIA 1946
++RE E C LR + RLPVT++ G+LG+GKTTF+N+VL HG+RLAVIENEFG +++DD LL RA E QV+LMPNGC+CCR R DLV A L+ V T ++ +GV+T +LDG+I+E SGL ++ PV+QTFF+ P VQ +RLDAV+C+ D+ L L SRE S L+ QLAL+DR+LLNK DLL EG P A++ CVRG V ++ VLG+E FS + + ++ MD + D +GG H H RLG TS+G+ + DGP++W F+ WL+ G L EE +R I R KGVLW + TP Y T R V+QG+YGH E E G +G S+LVFIG P ++ +++ + C+A
Sbjct: 60 ERREIESCALLRSK-RLPVTLLCGYLGSGKTTFLNYVLQGSHGKRLAVIENEFGAVSIDDALLPSPPXXXXXXXXXXXSLRARAPEEAQVVLMPNGCLCCRARQDLVEAFLHLLA----VNTKQQ------------KGVATL--------------------------------QLDGIILELSGLADVGPVVQTFFSHPEVQAQLRLDAVICVVDAFSLSRVL-----SREGXXXXX---------XXXXXXXXXXXXXEAASLELIAEQLALADRVLLNKMDLLEAAKEGXXXXXXXXXXXXXXXXXXXXAPEAVLLACVRGEVPLEEVLGLEAFSPSRTFQGEKESKGKKWMDGGA-------------------DGGEFAVGGRAXXXXXXXXGHAHTRLGFTSIGLTIDDGPLEWTAFESWLEQTLSATKSTGSGSRGPAGDLREEGQRGDGREVSKEPPQEGSALRQEQGEGQVIVRTKGVLWVTKKTP------YRRATV----VEKRVVLQGIYGHLEMREEEGDMASGHFPLVSKLVFIGLFKDPVAMKRNMEGALLECLA 538
BLAST of mRNA_H-paniculata_contig3420.9138.1 vs. uniprot
Match: A0A7S4S2X6_9DINO (Hypothetical protein (Fragment) n=1 Tax=Alexandrium monilatum TaxID=311494 RepID=A0A7S4S2X6_9DINO) HSP 1 Score: 185 bits (469), Expect = 1.970e-48 Identity = 135/382 (35.34%), Postives = 183/382 (47.91%), Query Frame = 3
Query: 300 MCIFCERAKASLDDPLAGLGLDTEDLFGYDAHSSSLKPRDSKVGRQRWEATLRQKREAERCEELRQRARLPVTVITGFLGAGKTTFVNHVLSSR-HGRRLAVIENEFGEIAVDDELLGDGGVERAEEAQQVILMPNGCMCCRVRGDLVAALQRLIMGTAGVTTTEEASNSPIGVFNGREGVSTADKADKATSNNDHDQGGAGTTGQTPLPSMQKATKLDGVIIECSGLDELAPVLQTFFADPFVQGYMRLDAVVCLCDSPRLLHTLISSSASRENATIGESSSSATSGEQVAGAEDASSGRSNDESAALVMSQLALSDRILLNKSDLLTFDEGQSLVKAVKGHFPGALVTQCVRGGVDIDLVLGVEGFSLDKALEMDRHFAD 1442
MCIFCERA L + L T QKR+ E+CE LR+R R+ T++TGFLGAGKTTF+N VL S HG+++ V++NEFG ++VDD+L+ VE++E +V++MPNGC+CCRVRGDLV AL+RL P GA G +P LDG++IECSGL E+ PV QTFFADP+VQ +LD V+C+CD+ A G T+G +V+ L+ QLA+SD LLNK DL+ + + V+ P V C G V++ VL + FSL+ AL +D HF +
Sbjct: 23 MCIFCERAANDLAEGL----------------------------------TPSQKRQIEQCERLRER-RVRATILTGFLGAGKTTFLNFVLKSLGHGQKIGVVQNEFGIVSVDDQLML---VEKSEA--EVVVMPNGCLCCRVRGDLVEALRRLAQ-----------RRLP----------------------------GADAAGAAEVP-------LDGLLIECSGLSEVLPVAQTFFADPYVQASYQLDGVLCVCDAGNF------------EALEGNGKDVGTAGPEVS---------------RLLREQLAISDVCLLNKCDLVDSTQRDKIGTRVRAVNPAIKVVPCRHGKVNLGQVLKINSFSLESALSLDAHFLE 291
BLAST of mRNA_H-paniculata_contig3420.9138.1 vs. uniprot
Match: A0A7C4YLW2_9BACT (GTP-binding protein n=1 Tax=Gemmataceae bacterium TaxID=2052164 RepID=A0A7C4YLW2_9BACT) HSP 1 Score: 180 bits (457), Expect = 2.460e-46 Identity = 149/483 (30.85%), Postives = 211/483 (43.69%), Query Frame = 3
Query: 501 ARLPVTVITGFLGAGKTTFVNHVLSSRHGRRLAVIENEFGEIAVDDELLGDGGVERAEEAQQVILMPNGCMCCRVRGDLVAALQRLIMGTAGVTTTEEASNSPIGVFNGREGVSTADKADKATSNNDHDQGGAGTTGQTPLPSMQKATKLDGVIIECSGLDELAPVLQTFFADPFVQGYMRLDAVVCLCDSPRLLHTLISSSASRENATIGESSSSATSGEQVAGAEDASSGRSNDESAALVMSQLALSDRILLNKSDLLTFDEGQSLVKAVKGHFPGALVTQCVRGGVDIDLVLGVEGFSLDKALEMDRHFADVLMDSDSTVAPQHSHRHGNATELDPKDSSHDDIGGHETGDTAKGRQHEHDRLGATSVGIELTDGPIDWVKFKKWLKGFLEEEQERIWRLKGVLWTSTPGSGASGYSTTTAWGWGAGSRTVVQGLYGHFESELGRWPAGSTRRSRLVFIGDLPPIVQESLKVGVRSCIAQ 1949
+R+PVTV+TGFLGAGKTT +NH+L+ +HG+R+AVIENEFGE+ VD +L V AEE ++ M NGC+CC VRGDL+ L L M++ K D ++IE +GL + PV QTFF D + +RLD +V + D+ H + RE V Q+A +D ILLNK+DL+T ++ L ++ P A V + G+++D VL V+GF+LD+ LEM+ D L + H H H E H D H + A H+HD TSV I+ T G +D KF W + L + I+R+KGVL + G R V QG++ + R RR++LVFIG + +E L G RSC+ +
Sbjct: 6 SRVPVTVLTGFLGAGKTTLLNHILTGQHGKRIAVIENEFGEVGVDQDL-----VIGAEE--EIFEMNNGCICCTVRGDLIRVLGNL---------------------------------------------------------MKRRDKFDYILIETTGLADPGPVAQTFFVDDEMHEKLRLDGIVTVVDAR---HVTLHLDDQRE-----------------------------------VREQIAFADVILLNKTDLVTPEQANQLEHRLRALNPTARVYRTQNAGIELDRVLHVQGFNLDRVLEME---PDFLKEK------PHEHHHHQEHECAGDPCDHPDH--HHNVEIAHDHTHDHD---ITSVAIQ-TPGDLDEKKFNAWFQQILANDGPNIFRMKGVLSIA-----------------GDPRRFVFQGVHMMVDHRSDRPWGKEPRRNKLVFIGRN--LDREKLTAGFRSCLVR 352
BLAST of mRNA_H-paniculata_contig3420.9138.1 vs. uniprot
Match: C1E1K2_MICCC (CobW C-terminal domain-containing protein n=1 Tax=Micromonas commoda (strain RCC299 / NOUM17 / CCMP2709) TaxID=296587 RepID=C1E1K2_MICCC) HSP 1 Score: 180 bits (457), Expect = 6.350e-46 Identity = 151/508 (29.72%), Postives = 221/508 (43.50%), Query Frame = 3
Query: 504 RLPVTVITGFLGAGKTTFVNHVLSSRHGRRLAVIENEFGEIAVDDELLGDGGVERAEEAQQVILMPNGCMCCRVRGDLVAALQRLIMGTAGVTTTEEASNSPIGVFNGREGVSTADKADKATSNNDHDQGGAGTTGQTPLPSMQKATKLDGVIIECSGLDELAPVLQTFFADPFVQGYMRLDAVVCLCDSPRL-LHTLISSSASRENATIGESSSSATSGEQVAGAEDASSGRSNDESAALVMSQLALSDRILLNKSDLLTFDEGQSLVKAVKGHFPGALVTQCVRGGVDIDLVLGVEGFSLDKALEMDRHFADVLMDSDSTVAPQHSHRHGNATELDPKDSSHDDIGGHETGD-----------------------TAKGRQHEHDRLGATSVGIELTDGPIDWVKFKKWLKGFLEEEQERIWRLKGVLWTSTPGSGASGYSTTTAWGWGAGSRTVVQGLYGH--FESELGRWPAGSTRRSRLVFIGDLPPIVQESLKVGVRSCIAQ 1949
+LPVT++TGFLGAGKTT VNH+L HG+ +AVIENEFG +++DD L+G E +E + +I M NGC+CC VRGDLV AL L K K D VIIE +GL + APV TFF +P + + R+D+++CL D+ + LH E+ G N+ + Q+A +DRILLNK DL++ E ++++ V+ A V + VD+D VLGV FS++K LE+D D L D + A +H D + D G H K R+ HD G +SVGI L +G +D+ + ++ L+E + I+R KGVL G+ ++ V QG++ H F W A R +R+VFIG + ++ L+ G R+C+ +
Sbjct: 9 KLPVTIVTGFLGAGKTTLVNHILKGDHGKLIAVIENEFGAVSIDDALVG----ENIKEQENIITMDNGCVCCTVRGDLVRAL---------------------------------------------------------LTLKDKTKKFDHVIIETTGLADPAPVAFTFFINPEIADHYRIDSILCLADAKHIGLHL----------------------------EEEKPDGAVNE-----AVQQVAFADRILLNKIDLVSDTELAAVMEQVRSINGVAEVIKTTNSVVDLDKVLGVSSFSIEKTLEVD---PDFLEDEEGHAAATAAH-----------DGAAADGGDHGXXXXXXXXXXXXXXXXXXXXXXXEPAAKKPRKKRHDLTGVSSVGI-LAEGELDFNQVNTFMMTVLQENAKSIYRSKGVLCFKDQGN----------------TKFVFQGVHEHINFGPSSVEWGADEPRVNRMVFIGRN--LNRKELEEGFRACLVK 389
BLAST of mRNA_H-paniculata_contig3420.9138.1 vs. uniprot
Match: A0A1Y5HX51_OSTTA (PRLI-interacting factor L-like protein n=3 Tax=Ostreococcus TaxID=70447 RepID=A0A1Y5HX51_OSTTA) HSP 1 Score: 177 bits (448), Expect = 8.830e-45 Identity = 137/492 (27.85%), Postives = 212/492 (43.09%), Query Frame = 3
Query: 480 CEELRQRARLPVTVITGFLGAGKTTFVNHVLSSRHGRRLAVIENEFGEIAVDDELLGDGGVERAEEAQQVILMPNGCMCCRVRGDLVAALQRLIMGTAGVTTTEEASNSPIGVFNGREGVSTADKADKATSNNDHDQGGAGTTGQTPLPSMQKATKLDGVIIECSGLDELAPVLQTFFADPFVQGYMRLDAVVCLCDSPRLLHTLISSSASRENATIGESSSSATSGEQVAGAEDASSGRSNDESAALVMSQLALSDRILLNKSDLLTFDEGQSLVKAVKGHFPGALVTQCVRGGVDIDLVLGVEGFSLDKALEMDRHFADVLMDSDSTVAPQHSHRHGNATELDPKDSSHDDIGGHETGDTAKGRQHEHDRLGATSVGIELTDGPIDWVKFKKWLKGFLEEEQERIWRLKGVLWTSTPGSGASGYSTTTAWGWGAGSRTVVQGLYG--HFESELGRWPAGSTRRSRLVFIGDLPPIVQESLKVGVRSCIAQ 1949
CE + + PVT++TGFLGAGKTT VNH+L HG ++AVIENEFG +++DD L+ E +E + VI M NGC+CC VRGDLV AL L + K D VIIE +GL + APV TFF +P + + R+D+++CL D+ H + + + + E+ + Q+A +DRILLNK DL++ +E ++L K ++ A V + VD+++VLGV FSL+K LE D F D + ++++HD G +SVGI + +G +D+ +++ L+E ++R KGVL G ++ V QG++ +F W R +R+VFIG + + +L+ G R+C+A+
Sbjct: 47 CEMSDETQKTPVTIVTGFLGAGKTTLVNHILRGDHGLKIAVIENEFGAVSIDDALVS----ENIKEKEDVISMDNGCVCCTVRGDLVRAL---------------------------------------------------------LTLRDRGKKFDAVIIETTGLADPAPVAFTFFINPEIAEHYRIDSILCLADAK---HVALHMEEEKPDGAVNEA-----------------------------VQQVAFADRILLNKIDLVSEEELETLEKTLRSVNASAEVLRTQNSVVDLNVVLGVNSFSLEKTLETDPSFMD------------------------------------------ENKENKHDLTGVSSVGIAV-EGELDFQAVNEFMMNLLQENALNMYRSKGVLCFEGQGD----------------AKFVFQGVHEQINFGPAASTWAENEPRINRMVFIGRN--LDRPALEAGFRACLAK 384
BLAST of mRNA_H-paniculata_contig3420.9138.1 vs. uniprot
Match: A0A2E1GIA7_9EURY (Cobalamin biosynthesis protein CobW n=5 Tax=cellular organisms TaxID=131567 RepID=A0A2E1GIA7_9EURY) HSP 1 Score: 175 bits (443), Expect = 9.200e-45 Identity = 149/481 (30.98%), Postives = 213/481 (44.28%), Query Frame = 3
Query: 504 RLPVTVITGFLGAGKTTFVNHVLSSRHGRRLAVIENEFGEIAVDDELLGDGGVERAEEAQQVILMPNGCMCCRVRGDLVAALQRLIMGTAGVTTTEEASNSPIGVFNGREGVSTADKADKATSNNDHDQGGAGTTGQTPLPSMQKATKLDGVIIECSGLDELAPVLQTFFADPFVQGYMRLDAVVCLCDSPRLLHTLISSSASRENATIGESSSSATSGEQVAGAEDASSGRSNDESAALVMSQLALSDRILLNKSDLLTFDEGQSLVKAVKGHFPGALVTQCVRGGVDIDLVLGVEGFSLDKALEMDRHFADVLMDSDSTVAPQHSHRHGNATELDPKDSSHDDIGGHETGDTAKGRQHEHDRLGATSVGIELTDGPIDWVKFKKWLKGFLEEEQERIWRLKGVLWTSTPGSGASGYSTTTAWGWGAGSRTVVQGLYGHFESEL-GRWPAGSTRRSRLVFIGDLPPIVQESLKVGVRSCI 1943
R+PVTV+TGFLGAGKTT +NH+L+ +HG+R+AVIENEFGE+ +DD ++ D AEE ++ M NGC+CC VRGDL+ L L M++ + D ++IE +GL + APV QTFF D + +RLDA+V + D+ LL L E+ G N+ + QLA +DRI+LNK DL+ E ++ ++ P A + + +G +++D +L V FSLD+ LE D F LDP +H+HD L TSVGIEL DG +D + WL L + I+R KG+L + GW R V QG++ + + G W AG RR+RLVFIG + + SL+ G +SC+
Sbjct: 5 RVPVTVLTGFLGAGKTTLLNHILTEQHGKRIAVIENEFGEVGIDDAIVLD-----AEE--EIFEMNNGCICCTVRGDLIRILGNL---------------------------------------------------------MRRKDRFDQILIETTGLADPAPVAQTFFVDDEMAAQLRLDAIVTVVDAKFLLPHLD---------------------------EEKPPGVENE-----AVEQLAFADRIVLNKIDLVDDSELDAVESRIREVNPLAPIVRTQQGKIELDAILEVGAFSLDRVLEDDPEF------------------------LDPD------------------AEHQHD-LTVTSVGIEL-DGDLDLDRLNDWLSDLLRTKGTDIFRSKGILSIA---------------GWE--ERYVFQGVHMLLDGQPNGVWGAGE-RRNRLVFIGRN--LDRASLEAGFKSCV 325
BLAST of mRNA_H-paniculata_contig3420.9138.1 vs. uniprot
Match: UPI001CC5007B (P-loop guanosine triphosphatase YjiA-like isoform X1 n=2 Tax=Telopea speciosissima TaxID=54955 RepID=UPI001CC5007B) HSP 1 Score: 178 bits (451), Expect = 1.000e-44 Identity = 143/482 (29.67%), Postives = 221/482 (45.85%), Query Frame = 3
Query: 504 RLPVTVITGFLGAGKTTFVNHVLSSRHGRRLAVIENEFGEIAVDDELLGDGGVERAEEAQQVILMPNGCMCCRVRGDLVAALQRLIMGTAGVTTTEEASNSPIGVFNGREGVSTADKADKATSNNDHDQGGAGTTGQTPLPSMQKATKLDGVIIECSGLDELAPVLQTFFADPFVQGYMRLDAVVCLCDSPRLLHTLISSSASRENATIGESSSSATSGEQVAGAEDASSGRSNDESAALVMSQLALSDRILLNKSDLLTFDEGQSLVKAVKGHFPG-ALVTQCVRGGVDIDLVLGVEGFSLDKALEMDRHFADVLMDSDSTVAPQHSHRHGNATELDPKDSSHDDIGGHETGDTAKGRQHEHDRLGATSVGIELTDGPIDWVKFKKWLKGFLEEEQERIWRLKGVLWTSTPGSGASGYSTTTAWGWGAGSRTVVQGLYGHFESELGR-WPAGSTRRSRLVFIGDLPPIVQESLKVGVRSCI 1943
R+P TVITGFLG+GKTT +NH+L+S+HGRR+AVIENEFGE+ +D L+ + ++ ++++ NGC+CC VRGDLV L +L + +K K D ++IE +GL + APV++TF D V Y++LD VV L D + L + + + E+ + Q+A +DRI+LNK DL++ + Q+L K +K H G A + + G VD+D VLGV G+ L+ R ++V +D H ++ H+ GGH HEHD +SV I +++G +D + WL+ +EE+ E ++RLKGVL S T G+ R VVQG++ + G+ W R ++LVFIG + + +L+ G + C+
Sbjct: 88 RVPTTVITGFLGSGKTTLLNHILNSQHGRRIAVIENEFGEVDIDGSLIAS----HSSVSEDIVMVNNGCLCCTVRGDLVKMLLKL--------------------------------------------------------AKEKLEKFDHIVIETTGLAKPAPVIETFCTDELVSQYVKLDGVVTLVDCKHAMQHL---NEVKPRFVVNEA-----------------------------LEQVAYADRIILNKIDLVSEADLQALTKRIK-HINGMARINKAAFGAVDVDFVLGVGGYDLN------RIESEVQLDEFHGTTQHH-------------EAGHEHHGGH-------CHDHEHDSA-VSSVSI-VSEGTMDLDEVDDWLQRLVEEKGENLYRLKGVL------------SVT-----GSDERYVVQGVHSILDGCQGKAWGPEEKRINKLVFIGRN--LDEVALRKGFKGCL 429
BLAST of mRNA_H-paniculata_contig3420.9138.1 vs. uniprot
Match: C1MKM0_MICPC (Predicted protein n=1 Tax=Micromonas pusilla (strain CCMP1545) TaxID=564608 RepID=C1MKM0_MICPC) HSP 1 Score: 177 bits (448), Expect = 1.020e-44 Identity = 150/496 (30.24%), Postives = 221/496 (44.56%), Query Frame = 3
Query: 504 RLPVTVITGFLGAGKTTFVNHVLSSRHGRRLAVIENEFGEIAVDDELLGDGGVERAEEAQQVILMPNGCMCCRVRGDLVAALQRLIMGTAGVTTTEEASNSPIGVFNGREGVSTADKADKATSNNDHDQGGAGTTGQTPLPSMQKATKLDGVIIECSGLDELAPVLQTFFADPFVQGYMRLDAVVCLCDSPRL-LHTLISSSASRENATIGESSSSATSGEQVAGAEDASSGRSNDESAALVMSQLALSDRILLNKSDLLTFDEGQSLVKAVKGHFPGALVTQCVRGGVDIDLVLGVEGFSLDKALEMDRHFADVLMDSDSTVAPQHSHRHGN-------ATELDPKDSSHDDIG--GHETGDTAKGR--QHEHDRLGATSVGIELTDGPIDWVKFKKWLKGFLEEEQERIWRLKGVLWTSTPGSGASGYSTTTAWGWGAGSRTVVQGLYG--HFESELGRWPAGSTRRSRLVFIGDLPPIVQESLKVGVRSCIAQ 1949
+LPVT++TGFLGAGKTT VNH+L HG+ +AVIENEFG +++DD L+G E +E + +I M NGC+CC VRGDLV AL L +A K D VIIE +GL + APV TFF +P + R+D+++CL D+ + LH AE+ G N+ + Q+A +DRILLNK DL+ + ++ +K A V + VD+D VLGV FS++K LE+D F D A +++ G A D SH I G + AK R + +HD G +SVGI + +G +D+ + ++ L+E I+R KGV+ G+ + V QG++ +F W R +++VFIG + ++ L+ G R+CIA+
Sbjct: 9 KLPVTIVTGFLGAGKTTLVNHILKGDHGKLIAVIENEFGAVSIDDALVG----ENIKEKENIITMDNGCVCCTVRGDLVRAL---------------------------------------------------------LTLKDRAKKFDHVIIETTGLADPAPVAFTFFINPEIAEAYRIDSILCLADAKHIGLHL----------------------------AEEKPDGAVNE-----AVQQVAFADRILLNKIDLVNDNLLDDVIDTLKSINAVAEVIKTTNSVVDLDKVLGVSSFSIEKTLEVDPDFLDDEEGHAKAEAIENAAADGTDDASKTAACTDDSHGHSHSQINRQGTTLNEPAKKRPRKKKHDLTGVSSVGI-VAEGELDFAEVNTFMMKVLQENALSIYRSKGVMCFKDQGA----------------VKFVFQGVHEQINFGPSSVMWGQDEPRVNKMVFIGRN--LNRKELEDGFRACIAK 391 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig3420.9138.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig3420.9138.1 >prot_H-paniculata_contig3420.9138.1 ID=prot_H-paniculata_contig3420.9138.1|Name=mRNA_H-paniculata_contig3420.9138.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=594bp MCIFCERAKASLDDPLAGLGLDTEDLFGYDAHSSSLKPRDSKVGRQRWEAback to top mRNA from alignment at H-paniculata_contig3420:6119..11781- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig3420.9138.1 ID=mRNA_H-paniculata_contig3420.9138.1|Name=mRNA_H-paniculata_contig3420.9138.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=5663bp|location=Sequence derived from alignment at H-paniculata_contig3420:6119..11781- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig3420:6119..11781- >mRNA_H-paniculata_contig3420.9138.1 ID=mRNA_H-paniculata_contig3420.9138.1|Name=mRNA_H-paniculata_contig3420.9138.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=3564bp|location=Sequence derived from alignment at H-paniculata_contig3420:6119..11781- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |