prot_H-paniculata_contig3416.9124.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig3416.9124.1
Unique Nameprot_H-paniculata_contig3416.9124.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length575
Homology
BLAST of mRNA_H-paniculata_contig3416.9124.1 vs. uniprot
Match: D7FNN0_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FNN0_ECTSI)

HSP 1 Score: 407 bits (1046), Expect = 1.070e-130
Identity = 276/593 (46.54%), Postives = 352/593 (59.36%), Query Frame = 0
Query:    3 SKNGFDFQAWAAHGVPFLSREQEAHIQRKLLERRAREDEAAAVAAAIAEAGSSETAS----------GEQAERPPHVTRDGTTLASLPLDEKTMILDARKKVEALLEEVSSADEYVERTLTLDPMNGRSRWLVYEFVGTQYPGVKLRNLTGPRNVLGIQIKTV-SPDKEQRELEEMQMRDAAAAKEQEDIKGAAGFRRVIDVLSKAGKPVIAHNGLLDLMHTHDKFVGPLPDGHEEGTQALHTLFPSLFDNKVVMSSAVDAGLAFPQTVPGKGFDWLRETQ-APT-------KGADNASGSTPCDSTAAEAARNEKTQKVENTDAGADNEDEGSAKDKMEVESGHVKNSAGEQPTN-GSSSNSSNSSKSGNYVSRAMWEASFAPGFEERYADGGQEHEAGYDAYLTGCCFAAAATLGLGVTVEELKGMGSGDGADGGREVPEALRPVQNKLPLWKIMAGQKLRLPGPTPAPDLTKLVKVSGFPKAAQTDAIVRTLTAAMPTNGEGEVRPMWFHWIDDTSGVAEFESADAARMLVKVADDATVAAAAVXXXXDMDAVTDGDGDDKPVGGVADPLNLKLEDMVLVAMGEPATGGG 575
            SK+GFDFQAWA+HGVPFLSR +E  ++ KL  R  RE   A VAA   EA +                   E P H  RDGTT+ SL   EK M+ DA KKVEALL E SS  EYV++++ L+PMNGR RWL+YEFVG+    VKL NL GP     ++I+TV   D E+   EE ++R    A++  D++ A GFRRV+D +SKAGKPVI HNGLLDL+HTHDKFVGP+P   ++GT+ALH+L P LFD+KVVM+ A+ AG+  P+TV G+   WLRE   AP        +GA+  +G  P +  A E  + + T  V  T  G  N   G +K   E             P   G+ + +S         +R  W+A  APGFEERY DGG+EHEAG+DAYLTGCCFAAAAT+GLGV ++ELK M SG+      E P AL   QN LPL+K++ GQ++ LPGP P  DL++ V VSGFP AA+TDA++ ++ A      +G V   WFHW+DDTSGV +  SA+ A  L++ A  A       XXXX       GDG     G  ADP  L L D+ LV M      GG
Sbjct:  111 SKHGFDFQAWASHGVPFLSRAEEEVVEGKLRRRWERE---ATVAAERKEAVAXXXXXXXXXXXXXXXAAAVEGPVHTARDGTTIESLQEPEKGMVKDALKKVEALLAESSSGGEYVQKSVKLEPMNGRQRWLMYEFVGSSTADVKLSNLPGPAYARPMEIRTVCKDDPEKHAEEEAKLRADEQARQLGDLRRAVGFRRVVDEISKAGKPVICHNGLLDLLHTHDKFVGPIPVDMDDGTRALHSLLPRLFDSKVVMAKAMAAGMKLPRTVLGEAHQWLREKYPAPXXXXXXLEEGAE--AGMEPAEGAAEEGQQVDGTAVVATTSGGEAN---GDSKTNGEGXXXXXXXXXAVPPVEAGAEAAASERDVEALERARRGWDAVLAPGFEERYKDGGREHEAGFDAYLTGCCFAAAATVGLGVGLDELKRMASGE------ETPAALGSAQNVLPLYKVVGGQQVCLPGPAPKVDLSRYVHVSGFPSAARTDAVLASIKAV-----DGCV-DSWFHWMDDTSGVVDCTSAEGAEALLRAAA-AXXXXXXXXXXXXXGTPAAGDGGS---GEEADPCRLSLGDLKLVQMEHALLNGG 679          
BLAST of mRNA_H-paniculata_contig3416.9124.1 vs. uniprot
Match: H9G9S4_ANOCA (Poly(A)-specific ribonuclease PARN n=2 Tax=Anolis carolinensis TaxID=28377 RepID=H9G9S4_ANOCA)

HSP 1 Score: 95.5 bits (236), Expect = 6.180e-17
Identity = 75/254 (29.53%), Postives = 121/254 (47.64%), Query Frame = 0
Query:    3 SKNGFDFQAWAAHGVPFLSREQEAHIQRKLLERRAREDEAAAVAAAIAEAGSSETASGEQAERPPHVTRDGTTLASLPLDEKTMILDARKKVEALLEEVSSADEYVERTLTLDPMNGRSRWLVYEFVGTQYPGVKLRNLTGPRNVLGIQIKTVSPDKEQR--------ELEEMQMRDAAAAKEQEDIKGAAGFRRVIDVLSKAGKPVIAHNGLLDLMHTHDKFVGPLPDGHEEGTQALHTLFPSLFDNKVVMSS 248
            +  GFDF     +G+P+L++E+E  +Q +  E+R++              GS   AS     + P          ++P D+KT I     +V+ LL+   SA      +L L+P  G  R L+Y+ +  +YP              GI ++T+  +K++R        E           AKEQE++K A GF RVI  ++ +GK V+ HN LLD+MHT  +F  PLP+   E  +    +FP L D K++ ++
Sbjct:  117 ANQGFDFNKVFRNGIPYLNQEEERQLQEQYEEKRSQ----------AGRVGSLSFASPNAQSKCP---------VTIPEDQKTFIDKVVDRVDTLLQNEESA------SLELEPCTGFQRKLIYQTLSWKYPK-------------GIHVETLETEKKERYIIVSKVDEXXXXXXXXXXXAKEQEELKDAVGFSRVIHAMANSGKLVVGHNMLLDVMHTIHQFYCPLPEDLGEFKELTTCVFPRLLDTKLMATT 332          
BLAST of mRNA_H-paniculata_contig3416.9124.1 vs. uniprot
Match: UPI000D6A12D4 (poly(A)-specific ribonuclease PARN isoform X2 n=1 Tax=Python bivittatus TaxID=176946 RepID=UPI000D6A12D4)

HSP 1 Score: 94.0 bits (232), Expect = 8.030e-17
Identity = 72/247 (29.15%), Postives = 126/247 (51.01%), Query Frame = 0
Query:    3 SKNGFDFQAWAAHGVPFLSREQEAHIQRKLLERRAREDEAAAVAAAIAEAGSSETASGEQAERPPHVTRDGTTLASLPLDEKTMILDARKKVEALLEEVSSADEYVERTLTLDPMNGRSRWLVYEFVGTQYP-GVKLRNLTGPRNVLGIQIKTVSPDKEQRELEEMQMRDAAAAKEQEDIKGAAGFRRVIDVLSKAGKPVIAHNGLLDLMHTHDKFVGPLPDGHEEGTQALHTLFPSLFDNKVVMSS 248
            +  GFDF     +G+P+L++E+E  ++ +  E+R++ +   A+         S  + G   +RP          +++P D+K  I    +++E LL+   S +      + L+P  G  R L+Y+ +  +YP G+ +  L   +    + I  V  ++ +R  ++ Q      AKEQE++K A GF RVI  L+ +GK V+ HN LLD+MHT  +F   LP+   E  +    +FP L D K++ S+
Sbjct:   56 ANQGFDFNKVFRNGIPYLNQEEERQLREQYDEKRSQANGLGAL---------SYMSPGTN-KRP----------SAIPEDQKKFIEKVIERIEGLLQNEESTN------IQLEPCTGFQRKLIYQTLSWKYPKGIHVETLETEKKERYMVISKVDEEERKRRGQQKQ------AKEQEELKDAVGFSRVIHALANSGKLVVGHNMLLDVMHTIHQFYCSLPEDFSEFKELATCVFPRLLDTKLMAST 270          
BLAST of mRNA_H-paniculata_contig3416.9124.1 vs. uniprot
Match: UPI0007DB7CE4 (poly(A)-specific ribonuclease PARN n=1 Tax=Anolis carolinensis TaxID=28377 RepID=UPI0007DB7CE4)

HSP 1 Score: 95.5 bits (236), Expect = 8.340e-17
Identity = 75/254 (29.53%), Postives = 121/254 (47.64%), Query Frame = 0
Query:    3 SKNGFDFQAWAAHGVPFLSREQEAHIQRKLLERRAREDEAAAVAAAIAEAGSSETASGEQAERPPHVTRDGTTLASLPLDEKTMILDARKKVEALLEEVSSADEYVERTLTLDPMNGRSRWLVYEFVGTQYPGVKLRNLTGPRNVLGIQIKTVSPDKEQR--------ELEEMQMRDAAAAKEQEDIKGAAGFRRVIDVLSKAGKPVIAHNGLLDLMHTHDKFVGPLPDGHEEGTQALHTLFPSLFDNKVVMSS 248
            +  GFDF     +G+P+L++E+E  +Q +  E+R++              GS   AS     + P          ++P D+KT I     +V+ LL+   SA      +L L+P  G  R L+Y+ +  +YP              GI ++T+  +K++R        E           AKEQE++K A GF RVI  ++ +GK V+ HN LLD+MHT  +F  PLP+   E  +    +FP L D K++ ++
Sbjct:  117 ANQGFDFNKVFRNGIPYLNQEEERQLQEQYEEKRSQ----------AGRVGSLSFASPNAQSKCP---------VTIPEDQKTFIDKVVDRVDTLLQNEESA------SLELEPCTGFQRKLIYQTLSWKYPK-------------GIHVETLETEKKERYIIVSKVDEXXXXXXXXXXXAKEQEELKDAVGFSRVIHAMANSGKLVVGHNMLLDVMHTIHQFYCPLPEDLGEFKELTTCVFPRLLDTKLMATT 332          
BLAST of mRNA_H-paniculata_contig3416.9124.1 vs. uniprot
Match: UPI001FDAA73E (poly(A)-specific ribonuclease PARN isoform X3 n=1 Tax=Phacochoerus africanus TaxID=41426 RepID=UPI001FDAA73E)

HSP 1 Score: 94.0 bits (232), Expect = 1.180e-16
Identity = 73/254 (28.74%), Postives = 125/254 (49.21%), Query Frame = 0
Query:    3 SKNGFDFQAWAAHGVPFLSREQEAHIQRKLLERRAREDEAAAVAAAIAEAGSSETASGEQAERPPHVTRDGTTLASLPLDEKTMILDARKKVEALLEEVSSADEYVERTLTLDPMNGRSRWLVYEFVGTQYPGVKLRNLTGPRNVLGIQIKTVSPDKEQRELEEMQMRDAAA--------AKEQEDIKGAAGFRRVIDVLSKAGKPVIAHNGLLDLMHTHDKFVGPLPDGHEEGTQALHTLFPSLFDNKVVMSS 248
            +  GFDF     +G+P+L++E+E  ++ +  E+R + + A A++ A                  P+ ++      ++P D+K  I    +K+E LL+   +      R L L+P  G  R L+Y+ +  +YP              GI ++T+  +K++R +   ++ +           AKEQE++K A GF RVI  ++ +GK VI HN LLD+MHT  +F  PLP    E  +    +FP L D K++ S+
Sbjct:  117 ASQGFDFNKVFRNGIPYLNQEEERQLREQYDEKRLQSNGAGALSYAS-----------------PNTSK---CPVAIPEDQKKFIDQVVEKIEDLLQSEEN------RNLDLEPCTGFQRKLIYQTLSWKYPK-------------GIHVETLETEKKERYIVISKVDEEXXXXXXXXXXAKEQEELKDAVGFSRVIHAIANSGKLVIGHNMLLDVMHTVHQFYCPLPADLNEFKEMTTCVFPRLLDTKLMAST 331          
BLAST of mRNA_H-paniculata_contig3416.9124.1 vs. uniprot
Match: UPI000441C128 (poly(A)-specific ribonuclease PARN isoform X3 n=2 Tax=Python bivittatus TaxID=176946 RepID=UPI000441C128)

HSP 1 Score: 94.0 bits (232), Expect = 1.610e-16
Identity = 72/247 (29.15%), Postives = 126/247 (51.01%), Query Frame = 0
Query:    3 SKNGFDFQAWAAHGVPFLSREQEAHIQRKLLERRAREDEAAAVAAAIAEAGSSETASGEQAERPPHVTRDGTTLASLPLDEKTMILDARKKVEALLEEVSSADEYVERTLTLDPMNGRSRWLVYEFVGTQYP-GVKLRNLTGPRNVLGIQIKTVSPDKEQRELEEMQMRDAAAAKEQEDIKGAAGFRRVIDVLSKAGKPVIAHNGLLDLMHTHDKFVGPLPDGHEEGTQALHTLFPSLFDNKVVMSS 248
            +  GFDF     +G+P+L++E+E  ++ +  E+R++ +   A+         S  + G   +RP          +++P D+K  I    +++E LL+   S +      + L+P  G  R L+Y+ +  +YP G+ +  L   +    + I  V  ++ +R  ++ Q      AKEQE++K A GF RVI  L+ +GK V+ HN LLD+MHT  +F   LP+   E  +    +FP L D K++ S+
Sbjct:   56 ANQGFDFNKVFRNGIPYLNQEEERQLREQYDEKRSQANGLGAL---------SYMSPGTN-KRP----------SAIPEDQKKFIEKVIERIEGLLQNEESTN------IQLEPCTGFQRKLIYQTLSWKYPKGIHVETLETEKKERYMVISKVDEEERKRRGQQKQ------AKEQEELKDAVGFSRVIHALANSGKLVVGHNMLLDVMHTIHQFYCSLPEDFSEFKELATCVFPRLLDTKLMAST 270          
BLAST of mRNA_H-paniculata_contig3416.9124.1 vs. uniprot
Match: UPI001C4AC972 (poly(A)-specific ribonuclease PARN isoform X1 n=3 Tax=Sceloporus undulatus TaxID=8520 RepID=UPI001C4AC972)

HSP 1 Score: 93.6 bits (231), Expect = 2.580e-16
Identity = 70/255 (27.45%), Postives = 126/255 (49.41%), Query Frame = 0
Query:    3 SKNGFDFQAWAAHGVPFLSREQEAHIQRKLLERRAREDEAAAVAAAIAEAGSSETASGEQAERPPHVTRDGTTL-ASLPLDEKTMILDARKKVEALLEEVSSADEYVERTLTLDPMNGRSRWLVYEFVGTQYPGVKLRNLTGPRNVLGIQIKTVSPDKEQR--------ELEEMQMRDAAAAKEQEDIKGAAGFRRVIDVLSKAGKPVIAHNGLLDLMHTHDKFVGPLPDGHEEGTQALHTLFPSLFDNKVVMSS 248
            +  GFDF     +G+P+L++E+E  ++ +  E+R++ +  ++++                     +V+ + ++   ++P D+K  I    ++V+ALL+   S +      L L+P  G  R L+Y+ +  +YP              GI ++T+  +K++R        E           AKEQE++K A GF RVI  L+ +GK V+ HN LLD+MHT  +F  PLP+   E  +    +FP L D K++ ++
Sbjct:  117 ANQGFDFNKVFRNGIPYLNQEEERQLREQYNEKRSQANRVSSLS---------------------YVSPNASSCPVTVPEDQKKFIDKVVERVDALLQNEESTN------LELEPCTGFQRKLIYQTLSWKYPK-------------GIHVETLETEKKERYIIVSKVDEXXXXXXXXXXXAKEQEELKDAVGFSRVIHALANSGKLVVGHNMLLDVMHTIHQFYCPLPEDLSEFKELTTCVFPRLLDTKLMATT 331          
BLAST of mRNA_H-paniculata_contig3416.9124.1 vs. uniprot
Match: A0A6P9E1Y2_PANGU (Poly(A)-specific ribonuclease PARN n=1 Tax=Pantherophis guttatus TaxID=94885 RepID=A0A6P9E1Y2_PANGU)

HSP 1 Score: 92.8 bits (229), Expect = 4.190e-16
Identity = 72/254 (28.35%), Postives = 123/254 (48.43%), Query Frame = 0
Query:    3 SKNGFDFQAWAAHGVPFLSREQEAHIQRKLLERRAREDEAAAVAAAIAEAGSSETASGEQAERPPHVTRDGTTLASLPLDEKTMILDARKKVEALLEEVSSADEYVERTLTLDPMNGRSRWLVYEFVGTQYPGVKLRNLTGPRNVLGIQIKTVSPDKEQR--------ELEEMQMRDAAAAKEQEDIKGAAGFRRVIDVLSKAGKPVIAHNGLLDLMHTHDKFVGPLPDGHEEGTQALHTLFPSLFDNKVVMSS 248
            +  GFDF     +G+P+L++E+E  ++ +  E+R++ +    +A                A +PP         +++P D+K  I    +++E LL+   +       T+ L+P  G  R L+Y+ +  +YP              GI ++TV  +K++R        E E  +      A+EQE++K A GF RVI  L+ +GK V+ HN LLD+MHT  +F   LP+   E  +    +FP L D K++ S+
Sbjct:  117 ANQGFDFNKVFRNGIPYLNQEEERQLREQYDEKRSQANGLGGLAYMS-----------PGAAKPP---------SAVPEDQKKFIEKVVERIEDLLQNEGNT------TVQLEPCTGFQRKLIYQTLSWKYPK-------------GIHVETVETEKKERYMIISKVDEEERKRRXXXXXAREQEELKDAVGFSRVIHALANSGKLVVGHNMLLDVMHTIHQFYCSLPEDFSEFKELATCVFPRLLDTKLMAST 331          
BLAST of mRNA_H-paniculata_contig3416.9124.1 vs. uniprot
Match: A0A5G2RG64_PIG (Poly(A)-specific ribonuclease PARN n=28 Tax=Boreoeutheria TaxID=1437010 RepID=A0A5G2RG64_PIG)

HSP 1 Score: 92.4 bits (228), Expect = 6.550e-16
Identity = 72/255 (28.24%), Postives = 125/255 (49.02%), Query Frame = 0
Query:    3 SKNGFDFQAWAAHGVPFLSREQEAHIQRKLLERRAREDEAAAVAAAIAEAGSSETASGEQAERPPHVTRDGTTL-ASLPLDEKTMILDARKKVEALLEEVSSADEYVERTLTLDPMNGRSRWLVYEFVGTQYPGVKLRNLTGPRNVLGIQIKTVSPDKEQRELEEMQMRDAAA--------AKEQEDIKGAAGFRRVIDVLSKAGKPVIAHNGLLDLMHTHDKFVGPLPDGHEEGTQALHTLFPSLFDNKVVMSS 248
            +  GFDF     +G+P+L++E+E  ++ +  E+R + + A A++                     +V+ + +    ++P D+K  I    +K+E LL+   +      R L L+P  G  R L+Y+ +  +YP              GI ++T+  +K++R +   ++ +           AKEQE++K A GF RVI  ++ +GK VI HN LLD+MHT  +F  PLP    E  +    +FP L D K++ S+
Sbjct:  194 ASQGFDFNKVFRNGIPYLNQEEERQLREQYDEKRLQSNGAGALS---------------------YVSPNTSKCPVAIPEDQKKFIDQVVEKIEDLLQSEEN------RNLDLEPCTGFQRKLIYQTLSWKYPK-------------GIHVETLETEKKERYIVISKVDEEXXXXXXXXXXAKEQEELKDAVGFSRVIHAIANSGKLVIGHNMLLDVMHTVHQFYCPLPADLNEFKEMTTCVFPRLLDTKLMAST 408          
BLAST of mRNA_H-paniculata_contig3416.9124.1 vs. uniprot
Match: UPI001E1D65A8 (poly(A)-specific ribonuclease PARN-like n=1 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1D65A8)

HSP 1 Score: 92.0 bits (227), Expect = 7.400e-16
Identity = 78/271 (28.78%), Postives = 133/271 (49.08%), Query Frame = 0
Query:    6 GFDFQAWAAHGVPFLSREQEAHIQRKLLERRAREDEAAAVAAAIAEAGSSETASGEQAERPPHVTRDGTTLASLPLDEKTMILDARKKVEALLEEVSSADEYVERTLTLDPMNGRSRWLVYEFVGTQYPG-VKLRNLTGPRNVLGIQIKTVSPDKEQRELEEMQMRDAAAAKEQEDIKGAAGFRRVIDVLSKAGKPVIAHNGLLDLMHTHDKFVGPLPDGHEEGTQALHTLFPSLFDNKVVMSSAVDAGLAFPQTVPGKGFDWLRE-TQAP 274
            GFDF      G+P+L    EA ++ +++++     E  A  A I+ +G S+         P  VT+       +P ++K  + D  KKVE  LE  S   E    +L+L P  G  R L Y+ + T+Y G + L++ TG      I +  V  + + +++EE +      A++  +I  A GF  VI ++S++GK ++ HN +LD+ HT ++F+ PLP  +E+       +FP L D K++ ++       F   +   G  +L   TQ P
Sbjct:  118 GFDFNKLIRDGIPYLRPVDEARLKEQVIKKH----EVFASPAFISPSGGSQ---------PGGVTKGPV---DIPPEQKDFVDDICKKVEKFLE--SGEHE----SLSLPPCTGFQRKLTYQSLQTKYGGELHLQSKTGENKERFIVVTKVKGEDQMKKMEESRQ-----AQDMAEIDAAVGFTHVIKMISQSGKLIVGHNMMLDIAHTINQFMYPLPQAYEDFKSMCRCVFPRLVDTKLMSNTQ-----PFKDRIDNTGLSYLHHLTQMP 356          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig3416.9124.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FNN0_ECTSI1.070e-13046.54Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
H9G9S4_ANOCA6.180e-1729.53Poly(A)-specific ribonuclease PARN n=2 Tax=Anolis ... [more]
UPI000D6A12D48.030e-1729.15poly(A)-specific ribonuclease PARN isoform X2 n=1 ... [more]
UPI0007DB7CE48.340e-1729.53poly(A)-specific ribonuclease PARN n=1 Tax=Anolis ... [more]
UPI001FDAA73E1.180e-1628.74poly(A)-specific ribonuclease PARN isoform X3 n=1 ... [more]
UPI000441C1281.610e-1629.15poly(A)-specific ribonuclease PARN isoform X3 n=2 ... [more]
UPI001C4AC9722.580e-1627.45poly(A)-specific ribonuclease PARN isoform X1 n=3 ... [more]
A0A6P9E1Y2_PANGU4.190e-1628.35Poly(A)-specific ribonuclease PARN n=1 Tax=Panther... [more]
A0A5G2RG64_PIG6.550e-1628.24Poly(A)-specific ribonuclease PARN n=28 Tax=Boreoe... [more]
UPI001E1D65A87.400e-1628.78poly(A)-specific ribonuclease PARN-like n=1 Tax=Me... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006941Ribonuclease CAF1PFAMPF04857CAF1coord: 3..392
e-value: 2.7E-39
score: 135.2
IPR036397Ribonuclease H superfamilyGENE3D3.30.420.10coord: 326..450
e-value: 5.1E-9
score: 37.6
coord: 154..311
e-value: 2.8E-24
score: 87.7
NoneNo IPR availablePANTHERPTHR15092POLY A -SPECIFIC RIBONUCLEASE/TARGET OF EGR1, MEMBER 1coord: 3..523
NoneNo IPR availablePANTHERPTHR15092:SF22POLY(A)-SPECIFIC RIBONUCLEASE PARNcoord: 3..523
IPR012337Ribonuclease H-like superfamilySUPERFAMILY53098Ribonuclease H-likecoord: 3..396

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig3416contigH-paniculata_contig3416:597..6265 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig3416.9124.1mRNA_H-paniculata_contig3416.9124.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig3416 597..6265 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig3416.9124.1 ID=prot_H-paniculata_contig3416.9124.1|Name=mRNA_H-paniculata_contig3416.9124.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=575bp
YPSKNGFDFQAWAAHGVPFLSREQEAHIQRKLLERRAREDEAAAVAAAIA
EAGSSETASGEQAERPPHVTRDGTTLASLPLDEKTMILDARKKVEALLEE
VSSADEYVERTLTLDPMNGRSRWLVYEFVGTQYPGVKLRNLTGPRNVLGI
QIKTVSPDKEQRELEEMQMRDAAAAKEQEDIKGAAGFRRVIDVLSKAGKP
VIAHNGLLDLMHTHDKFVGPLPDGHEEGTQALHTLFPSLFDNKVVMSSAV
DAGLAFPQTVPGKGFDWLRETQAPTKGADNASGSTPCDSTAAEAARNEKT
QKVENTDAGADNEDEGSAKDKMEVESGHVKNSAGEQPTNGSSSNSSNSSK
SGNYVSRAMWEASFAPGFEERYADGGQEHEAGYDAYLTGCCFAAAATLGL
GVTVEELKGMGSGDGADGGREVPEALRPVQNKLPLWKIMAGQKLRLPGPT
PAPDLTKLVKVSGFPKAAQTDAIVRTLTAAMPTNGEGEVRPMWFHWIDDT
SGVAEFESADAARMLVKVADDATVAAAAVAVPVDMDAVTDGDGDDKPVGG
VADPLNLKLEDMVLVAMGEPATGGG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006941RNase_CAF1
IPR036397RNaseH_sf
IPR012337RNaseH-like_sf