prot_H-paniculata_contig340.9081.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig340.9081.1
Unique Nameprot_H-paniculata_contig340.9081.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length1322
Homology
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BLAST of mRNA_H-paniculata_contig340.9081.1 vs. uniprot
Match: D7FWU0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWU0_ECTSI)

HSP 1 Score: 101 bits (252), Expect = 2.120e-19
Identity = 45/93 (48.39%), Postives = 62/93 (66.67%), Query Frame = 0 
Query:  475 MHNPLACDEDIVDTLSGFVGDQEYLFFAVVCRGWKEAWGQRPKVTGAVTPDRSAMQLRYSFECGLQPSTALSRSAARVGKLPLLRCALANDCP 567
            M NPL  ++ +V+ L  +V   +YLFFA VCRGW  AWG+RP VT A T   S  QL +SF CGL+ +  +  +AA++G+L LL+CA+ N CP
Sbjct:    5 MLNPLTSNKTVVNHLMEYVDHNQYLFFATVCRGWSRAWGERPAVTRAATNGTSVSQLSFSFHCGLRRTKGICETAAKLGRLDLLQCAVLNGCP 97
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BLAST of mRNA_H-paniculata_contig340.9081.1 vs. uniprot
Match: D7G8V2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8V2_ECTSI)

HSP 1 Score: 95.1 bits (235), Expect = 1.370e-16
Identity = 45/99 (45.45%), Postives = 58/99 (58.59%), Query Frame = 0 
Query:  475 MHNPLACDEDIVDTLSGFVGDQEYLFFAVVCRGWKEAWGQRPKVTGAVTPDRSAMQLRYSFECGLQPSTALSRSAARVGKLPLLRCALANDCPWTEDMC 573
            M   L    D+   L  FV  +++LFFA VCR WKEAWGQRP  T AVT D +  QL  +F+CGL     +  S A++G+L LL+CA  + C W E  C
Sbjct:    1 MDAALFAQSDVASCLVEFVDYEQFLFFAGVCRAWKEAWGQRPPTTRAVTEDTTVAQLSQNFQCGLSLIADVCTSVAKLGRLDLLQCARRHGCAWNEVTC 99
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BLAST of mRNA_H-paniculata_contig340.9081.1 vs. uniprot
Match: A0A6H5JHR4_9PHAE (DNA_pol_lambd_f domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHR4_9PHAE)

HSP 1 Score: 70.5 bits (171), Expect = 2.010e-8
Identity = 41/100 (41.00%), Postives = 60/100 (60.00%), Query Frame = 0 
Query:   61 SSSFLRGRLFNKAISREHLLVEVLS--------------GTAPPRVRLTVVGANPVMVIRGSQQRQASKALSH-GESAVLEPGDAFRFCRGFEYSIRIST 145
            SS+FLR  L +  ISREH+ V+ ++                AP RVR++VVG+NPV+++R  ++    K+  H G+SAV   GD FRFCRGF+  +R+ T
Sbjct:   37 SSTFLRKYLTDATISREHVRVQAIAYNDDSGDGGSEHDAAAAPSRVRVSVVGSNPVLLVR--RKPPGGKSYIHRGQSAVAGVGDGFRFCRGFDKVVRVVT 134
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig340.9081.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7FWU0_ECTSI2.120e-1948.39Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7G8V2_ECTSI1.370e-1645.45Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JHR4_9PHAE2.010e-841.00DNA_pol_lambd_f domain-containing protein n=1 Tax=... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 1003..1023
NoneNo IPR availableCOILSCoilCoilcoord: 831..871
NoneNo IPR availableGENE3D2.60.200.20coord: 34..142
e-value: 1.1E-5
score: 27.3
NoneNo IPR availablePANTHERPTHR46586FAMILY NOT NAMEDcoord: 628..887
NoneNo IPR availablePANTHERPTHR46586FAMILY NOT NAMEDcoord: 543..648
NoneNo IPR availablePANTHERPTHR46586:SF3ANKYRIN REPEAT-CONTAINING PROTEINcoord: 543..648
NoneNo IPR availablePANTHERPTHR46586:SF3ANKYRIN REPEAT-CONTAINING PROTEINcoord: 542..704
NoneNo IPR availablePANTHERPTHR46586FAMILY NOT NAMEDcoord: 542..704
NoneNo IPR availablePANTHERPTHR46586:SF3ANKYRIN REPEAT-CONTAINING PROTEINcoord: 628..887
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 548..732
e-value: 4.1E-7
score: 31.5
IPR036770Ankyrin repeat-containing domain superfamilySUPERFAMILY48403Ankyrin repeatcoord: 575..802

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig340contigH-paniculata_contig340:22374..39234 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig340.9081.1mRNA_H-paniculata_contig340.9081.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig340 22064..40090 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig340.9081.1 ID=prot_H-paniculata_contig340.9081.1|Name=mRNA_H-paniculata_contig340.9081.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=1322bp
MWSYRSQVVAAWGRQCSAKKVTATMGNGEATITLNVDGEEPAKLGADNGA
AQLILGRGGSSSSFLRGRLFNKAISREHLLVEVLSGTAPPRVRLTVVGAN
PVMVIRGSQQRQASKALSHGESAVLEPGDAFRFCRGFEYSIRISTPIRTT
DKPQEKEGTQGSDDQLHVEEVIQGCDNITTKNGGSNSSRDTGTSSAIGVG
HANVQPPEKHESVKVEFDEKPGNQASVVDSAEVVRVGKGQPSSEDATTIG
AAMLSRSELFLASDAGQDLEKSLNCSGSAMSAGESVAAAAMYEKEGLSAD
GDISLPAQGETKVKQEACEDDQGRSEEQSGNNAAAPATATNVEASSSRQM
VPSNMVDIKGAISVDGGANVRRAPDVGFKNDGTPAKRVRMLHMEEDASRP
VDECETAPPPLQTPEQTVLSGRDWLSAMSIMTSRKTVIPLEVSLHPEGAY
QALEPKPVQSPNTHTYASRTPTGAMHNPLACDEDIVDTLSGFVGDQEYLF
FAVVCRGWKEAWGQRPKVTGAVTPDRSAMQLRYSFECGLQPSTALSRSAA
RVGKLPLLRCALANDCPWTEDMCAAAAESGKLDVLQWLREEGCPWDENTC
FWAAAEGHLHVLQWARAYGCPWDRYVCSGAARHGHLHVLEWAKANGCSWN
EDICMEGVRGGRLDVVKWSRGQGAPWNEILCSRAAGYGHLHILQWARENG
APWNELQLCRSAARKGQLHVLQWARNQGCPWHEDICMEAAKGGHQGVLQW
ARENGCPWNESTCRGAAAGGHLKTLQWARENGCPWNGDTLIEAEHNGHRD
VLVWAREKDCPDDAARVGGHSVLPQQQSQSNREQEQQQQQQQQEYHQQRQ
LELELKQQRQLQIQRQRQQQQPQRQLHLQQERQQQVQEQQKLLLQGQFQQ
QPQQGPPEQNQAEQMLTLEQLLLHHPHQLEIMQDMHQQPQSQHVTTVVRQ
PSPDLGHDAVVWRCVIAYMRIYQNSILQHLPGLLAAAHATMYPNGTCGAS
VVHERLKRSMQKLNANLAERRQRGDGIVFTPTAVAEVVEEQNQLLLAELA
LMLGSKLPALATEMHLATGLNNKAVSAWKEMETKVRRFNRASLSRKPASS
SGAHASTTQLQLQASRPQNQLQLLQQQQSPTSFSEVIDLTVEALGAIQDV
TDSPVPTATTVVPQQLSTYRQTGVWRWLLYHVQTYQARVSSDLPGLIAQA
AQARASPTVNVLGAPAIRVQLEQAAKVMNIAIVNYRRRNKAIVYDAATMA
SVYKAQNRLFSHELTKLGLDLPSLAPFIHLETELKRRAIVANRAVQTKME
TVRAAALRSEGGHRSGGVGII*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036770Ankyrin_rpt-contain_sf