mRNA_H-paniculata_contig3399.9074.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig3399.9074.1 vs. uniprot
Match: A0A060S825_PYCCI (CCHC-type domain-containing protein n=1 Tax=Pycnoporus cinnabarinus TaxID=5643 RepID=A0A060S825_PYCCI) HSP 1 Score: 171 bits (433), Expect = 1.270e-43 Identity = 91/215 (42.33%), Postives = 139/215 (64.65%), Query Frame = 1
Query: 1 IFEHKLKEDGSVVRYKARVVAQGFSQMEGKGFFGTSAPAARMSTLRTVFSLVAKHDFELEGMGVDAAHLNALVE*ELFVKLPPEFSPFFRDIPFVRCLRKSLYGLRQSNRSWNNTVGDFLVGIGLQRSTTDPCLCFSLDEGGETDILVAVYVDDLIIAGRREKVDEFKHNISRRFRVKDLGSLSRVLGIEVQRDRSNGTISIPQDDYIREVLKRF 645
+F K DGS+ ++KAR+VAQG++QM G F T AP A++S++RT+ +L A++D+ELE M V +A+LN ++ E++++ PP +P + V CL+K+LYGL+Q+ R W T+ + + +G R +D + + G++ ++VA VD L IAG R+ V +FK IS RF + DLG++ +LGIEVQRDR TI+I Q YI V RF
Sbjct: 1013 VFRIKRDADGSITQFKARLVAQGYTQMPGVDFNETFAPVAKLSSIRTILALAARYDWELEQMEVKSAYLNGRLDEEIYMRQPPGSAPAGLE-HLVCCLKKTLYGLKQAGRGWYKTLSNRMAEMGFTRCASDHAVWYK--RAGDSIVIVASSVDHLTIAGTRDFVMDFKSAISARFEMSDLGAMRWILGIEVQRDRQARTIAISQRTYIDTVAARF 1224
BLAST of mRNA_H-paniculata_contig3399.9074.1 vs. uniprot
Match: A0A2G8RWY5_9APHY (Transcription factor n=1 Tax=Ganoderma sinense ZZ0214-1 TaxID=1077348 RepID=A0A2G8RWY5_9APHY) HSP 1 Score: 164 bits (415), Expect = 3.110e-41 Identity = 90/217 (41.47%), Postives = 136/217 (62.67%), Query Frame = 1
Query: 1 IFEHKLKEDGSVVRYKARVVAQGFSQMEGKGFFG--TSAPAARMSTLRTVFSLVAKHDFELEGMGVDAAHLNALVE*ELFVKLPPEFSPFFRDIPFVRCLRKSLYGLRQSNRSWNNTVGDFLVGIGLQRSTTDPCLCFSLDEGGETDILVAVYVDDLIIAGRREKVDEFKHNISRRFRVKDLGSLSRVLGIEVQRDRSNGTISIPQDDYIREVLKRF 645
+F K +G+V +KAR+VAQGFSQ+ G+ + T AP +R+ ++RT+ SL A+HD+EL M V +A+LN ++E ++++LPP F+P + R L+K+LYGL+Q+ R W T+ + +G R D + + + GE+ I+VA VDDL I G + VD F +I +RF + DLG L +LGIEV+RDR TI+I Q YI ++ RF
Sbjct: 1077 VFRVKHDAEGAVSGFKARLVAQGFSQVPGRDYHDDETFAPVSRLPSIRTILSLAARHDWELRQMDVKSAYLNGILEETVYMRLPPGFAPPEQSHLVCR-LKKTLYGLKQAGRGWYKTLTAAMENMGFTRCVADHAVFYKRE--GESAIIVAASVDDLTITGTSDLVDAFAVDIKQRFEMSDLGDLHWILGIEVRRDRQARTIAISQRSYIDTIVSRF 1290
BLAST of mRNA_H-paniculata_contig3399.9074.1 vs. uniprot
Match: H3H934_PHYRM (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3H934_PHYRM) HSP 1 Score: 155 bits (391), Expect = 3.930e-41 Identity = 80/217 (36.87%), Postives = 135/217 (62.21%), Query Frame = 1
Query: 1 IFEHKLKEDGSVVRYKARVVAQGFSQMEGKGFFGTSAPAARMSTLRTVFSLVAKHDFELEGMGVDAAHLNALVE*ELFVKLPPEFSPFFRDIPFVRC-LRKSLYGLRQSNRSWNNTVGDFLVGIGLQRSTTDPCLCFSLDEGGETDILVAVYVDDLIIAGRREKV-DEFKHNISRRFRVKDLGSLSRVLGIEVQRDRSNGTISIPQDDYIREVLKRF 645
+F K + G + R+KAR+VA+GFSQ G + T AP A+ +++R V SL AK+ +L M V A LN +++ ++++ P + D P C L++SLYGL+QS R WN T+ DF++ +G ++ +D C+ D G+ I VA+YVDDL++A +++ + KH +S+RF + DLG L LG+E++ DR +G +++ Q +++ +L +F
Sbjct: 34 VFRVKDNQAGEIERFKARLVAKGFSQKYGIDYDETFAPVAKFTSIRIVLSLAAKYGLKLHQMDVKTAFLNGVLDEDIYMAQPDGYVD--EDHPDHVCKLKRSLYGLKQSPRMWNQTIDDFMLKLGFKKCESDHCVYLKRD--GQDMIFVALYVDDLVLASSNDELLESTKHALSKRFEMTDLGELEYFLGMEIKNDRDSGKVTVRQTKFLKSILTKF 246
BLAST of mRNA_H-paniculata_contig3399.9074.1 vs. uniprot
Match: H3H9Y1_PHYRM (CCHC-type domain-containing protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3H9Y1_PHYRM) HSP 1 Score: 157 bits (396), Expect = 1.150e-39 Identity = 81/217 (37.33%), Postives = 135/217 (62.21%), Query Frame = 1
Query: 1 IFEHKLKEDGSVVRYKARVVAQGFSQMEGKGFFGTSAPAARMSTLRTVFSLVAKHDFELEGMGVDAAHLNALVE*ELFVKLPPEFSPFFRDIPFVRC-LRKSLYGLRQSNRSWNNTVGDFLVGIGLQRSTTDPCLCFSLDEGGETDILVAVYVDDLIIAGRREKV-DEFKHNISRRFRVKDLGSLSRVLGIEVQRDRSNGTISIPQDDYIREVLKRF 645
+F K + G + R+KAR+VA+GFSQ G + T AP A+ +++R V SL AK+ +L M V A LN +++ ++++ P + D P C L++SLYGL+QS R WN T+ DF++ +G ++ +D C+ D G+ I VA+YVDDL++A +++ D KH +S+RF + DLG L LG+E++ DR +G +++ Q +++ +L +F
Sbjct: 332 VFRVKENQAGEIERFKARLVAKGFSQKYGIDYDETFAPVAKFTSIRIVLSLAAKYGLKLHQMDVKTAFLNGVLDEDIYMAQPDGYVD--EDHPDHVCKLKRSLYGLKQSPRMWNQTIDDFMLKLGFKKCESDHCVYLKRD--GQDMIFVALYVDDLVLASSNDELLDSTKHALSKRFEMTDLGELEYFLGMEIKNDRDSGKVTVRQTKFLKSILTKF 544
BLAST of mRNA_H-paniculata_contig3399.9074.1 vs. uniprot
Match: H3H8P6_PHYRM (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3H8P6_PHYRM) HSP 1 Score: 150 bits (380), Expect = 2.030e-39 Identity = 78/217 (35.94%), Postives = 133/217 (61.29%), Query Frame = 1
Query: 1 IFEHKLKEDGSVVRYKARVVAQGFSQMEGKGFFGTSAPAARMSTLRTVFSLVAKHDFELEGMGVDAAHLNALVE*ELFVKLPPEFSPFFRDIPFVRC-LRKSLYGLRQSNRSWNNTVGDFLVGIGLQRSTTDPCLCFSLDEGGETDILVAVYVDDLIIAGRREKV-DEFKHNISRRFRVKDLGSLSRVLGIEVQRDRSNGTISIPQDDYIREVLKRF 645
+F K + G + R+KAR+VA+GFSQ + T AP A+ +++R V SL AK+ +L M V A LN +++ ++++ P + D P C L++SLYGL+QS R WN T+ DF++ +G ++ +D C+ D G+ I VA+YVDDL++A +++ + KH +S+RF + DLG L LG+E++ D +G +++ Q +++ +L +F
Sbjct: 73 VFRVKENQAGEIERFKARLVAKGFSQKYDIDYDETFAPVAKFTSIRIVLSLAAKYGLKLHQMDVKTAFLNGVLDEDIYMAQPDGYVD--EDHPDHVCKLKRSLYGLKQSPRMWNQTIDDFMLKLGFKKCESDHCVYLKRD--GQDMIFVALYVDDLVLASSNDELLESTKHALSKRFEMTDLGELEYFLGMEIKNDHGSGKVTVRQTKFLKSILTKF 285
BLAST of mRNA_H-paniculata_contig3399.9074.1 vs. uniprot
Match: A0A401GQU1_9APHY (Uncharacterized protein n=3 Tax=Sparassis crispa TaxID=139825 RepID=A0A401GQU1_9APHY) HSP 1 Score: 159 bits (401), Expect = 2.200e-39 Identity = 86/215 (40.00%), Postives = 133/215 (61.86%), Query Frame = 1
Query: 1 IFEHKLKEDGSVVRYKARVVAQGFSQMEGKGFFGTSAPAARMSTLRTVFSLVAKHDFELEGMGVDAAHLNALVE*ELFVKLPPEFSPFFRDIPFVRCLRKSLYGLRQSNRSWNNTVGDFLVGIGLQRSTTDPCLCFSLDEGGETDILVAVYVDDLIIAGRREKVDEFKHNISRRFRVKDLGSLSRVLGIEVQRDRSNGTISIPQDDYIREVLKRF 645
+F K +G + YKAR+VAQGFSQ+ G F T AP A+++++R + +L A+HD+++ M V A+LNA +E E+F+K PP + ++ +V LR ++YGL+QS R W + L +GL RS D C+ + ++ +++A+ VDD IAG V FK IS+RF + DLG + +LGIEV+RDR+ T+S+ Q YI ++ RF
Sbjct: 1009 VFRIKRNANGKIESYKARLVAQGFSQIPGIDFNDTFAPVAKLASIRIILALAARHDWDVHQMDVKGAYLNADLEEEIFMKQPPGQAKRGKE-HWVCLLRHAIYGLKQSGRQWFKKMCAALDEMGLSRSLVDHCVFYLDEDDDSVTLIIALSVDDTTIAGTNNAVLWFKTEISKRFEMTDLGEMHWILGIEVRRDRAARTLSLSQRAYIDGLMARF 1222
BLAST of mRNA_H-paniculata_contig3399.9074.1 vs. uniprot
Match: A0A060S5X4_PYCCI (Integrase catalytic domain-containing protein n=1 Tax=Pycnoporus cinnabarinus TaxID=5643 RepID=A0A060S5X4_PYCCI) HSP 1 Score: 157 bits (398), Expect = 3.720e-39 Identity = 86/216 (39.81%), Postives = 135/216 (62.50%), Query Frame = 1
Query: 1 IFEHKLKEDGSVVRYKARVVAQGFSQMEGKGFFGTSAPAARMSTLRTVFSLVAKHDFELEGMGVDAAHLNALVE*ELFVKLPPEFSPFFRDIPFVRC-LRKSLYGLRQSNRSWNNTVGDFLVGIGLQRSTTDPCLCFSLDEGGETDILVAVYVDDLIIAGRREKVDEFKHNISRRFRVKDLGSLSRVLGIEVQRDRSNGTISIPQDDYIREVLKRF 645
+F K DGS+ ++KAR+VAQG++QM G F T AP ++S++ T+ +L A++D+ELE M V +A+LN ++ E++++ PP +P + + C L+K+LYGL+Q+ W T+ + + +G +D + + G++ ++VA VDDL IAG R+ V +FK IS RF + DLG++ +LGIEVQRDR I+I Q YI V RF
Sbjct: 347 VFHIKRDADGSITQFKARLVAQGYTQMPGVDFNETFAPVTKLSSICTILALTARYDWELEQMDVKSAYLNGRLDEEIYMRQPPGSAP--AGLKHLVCHLKKTLYGLKQAGHGWYKTLANGMAEMGFTCCASDHAVWYK--RAGDSIVIVASSVDDLTIAGTRDFVMDFKSAISARFEMSDLGAMRWILGIEVQRDRQARMIAISQRTYIDTVAVRF 558
BLAST of mRNA_H-paniculata_contig3399.9074.1 vs. uniprot
Match: H3H9D6_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3H9D6_PHYRM) HSP 1 Score: 155 bits (391), Expect = 3.450e-38 Identity = 80/217 (36.87%), Postives = 135/217 (62.21%), Query Frame = 1
Query: 1 IFEHKLKEDGSVVRYKARVVAQGFSQMEGKGFFGTSAPAARMSTLRTVFSLVAKHDFELEGMGVDAAHLNALVE*ELFVKLPPEFSPFFRDIPFVRC-LRKSLYGLRQSNRSWNNTVGDFLVGIGLQRSTTDPCLCFSLDEGGETDILVAVYVDDLIIAGRREKV-DEFKHNISRRFRVKDLGSLSRVLGIEVQRDRSNGTISIPQDDYIREVLKRF 645
+F K + G + R+KAR+VA+GFSQ G + T AP A+ +++R V SL AK+ +L M V A LN +++ ++++ P + D P C L++SLYGL+QS R WN T+ DF++ +G ++ +D C+ D G+ I VA+YVDDL++A +++ + KH +S+RF + DLG L LG+E++ DR +G +++ Q +++ +L +F
Sbjct: 452 VFRVKENQAGEIERFKARLVAKGFSQKYGIDYDETFAPVAKFTSIRIVLSLAAKYGLKLHQMDVKTAFLNGVLDEDIYMAQPDGYVD--EDHPDHVCKLKRSLYGLKQSPRMWNQTIDDFMLKLGFKKCESDHCVYLKRD--GQDMIFVALYVDDLVLASSNDELLESTKHALSKRFEMTDLGELEYFLGMEIKNDRDSGKVTVRQTKFLQSILTKF 664
BLAST of mRNA_H-paniculata_contig3399.9074.1 vs. uniprot
Match: H3H7U0_PHYRM (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3H7U0_PHYRM) HSP 1 Score: 152 bits (383), Expect = 3.500e-38 Identity = 80/217 (36.87%), Postives = 135/217 (62.21%), Query Frame = 1
Query: 1 IFEHKLKEDGSVVRYKARVVAQGFSQMEGKGFFGTSAPAARMSTLRTVFSLVAKHDFELEGMGVDAAHLNALVE*ELFVKLPPEFSPFFRDIPFVRC-LRKSLYGLRQSNRSWNNTVGDFLVGIGLQRSTTDPCLCFSLDEGGETDILVAVYVDDLIIAGRREKV-DEFKHNISRRFRVKDLGSLSRVLGIEVQRDRSNGTISIPQDDYIREVLKRF 645
+F K + G + R+KAR+VA+GFSQ G + T AP A+ +++R V SL AK+ +L M V A LN +++ ++++ P + D P C L++SLYGL+QS R WN T+ DF++ +G ++ +D C+ D G+ I VA+YVDDL++A +++ + KH +S+RF + DLG L LG+E+++D G +S+ Q + +++L++F
Sbjct: 210 VFRVKENQAGEIERFKARLVAKGFSQKYGIDYDETFAPVAKFTSIRIVLSLAAKYGLKLHQMDVKTAFLNGVLDEDIYMAQPDGYVD--EDHPDHVCKLKRSLYGLKQSPRMWNQTIDDFMLKLGFKKCESDHCVYLKRD--GQDMIFVALYVDDLVLASSNDELLESTKHALSKRFEMTDLGELEYFLGMEIEQDVVTGKMSMRQTKFAKDILQKF 422
BLAST of mRNA_H-paniculata_contig3399.9074.1 vs. uniprot
Match: A0A0C9RAA9_9HYME (POLX_4 protein (Fragment) n=1 Tax=Fopius arisanus TaxID=64838 RepID=A0A0C9RAA9_9HYME) HSP 1 Score: 154 bits (388), Expect = 6.430e-38 Identity = 82/216 (37.96%), Postives = 133/216 (61.57%), Query Frame = 1
Query: 1 IFEHKLKEDGSVVRYKARVVAQGFSQMEGKGFFGTSAPAARMSTLRTVFSLVAKHDFELEGMGVDAAHLNALVE*ELFVKLPPEFSPFFRDIPFVRCLRKSLYGLRQSNRSWNNTVGDFLVGIGLQRSTTDPCLCFSLDEGGETDILVAVYVDDLIIAGRREKVDE-FKHNISRRFRVKDLGSLSRVLGIEVQRDRSNGTISIPQDDYIREVLKRF 645
+F+ K +G++VRYKAR+V +G SQ +G + T +P R ++LR +F++ AKHD + + A LN ++ E+F+K P +S + V L KSLYGL+Q+++ WN+ + + L+ +GL RS D C+ F + E + + VA+YVDD+++ +K + K+ +S + ++KD+GS S VLG+ VQRD I + Q +YI VLKRF
Sbjct: 282 VFKTKRNAEGALVRYKARLVVKGCSQKQGVDYSETFSPVVRYNSLRFLFAMAAKHDLSVHQLDAVTAFLNGELQEEVFMKQPEGYSD---NSGRVCRLLKSLYGLKQASKVWNDKLNEVLISLGLIRSEVDQCIYFCVSE--YSMVYVAIYVDDVLVFSNDKKATQRIKNELSSKIKMKDMGSASSVLGMRVQRDEVKKLIKLDQSEYISSVLKRF 492 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig3399.9074.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig3399.9074.1 >prot_H-paniculata_contig3399.9074.1 ID=prot_H-paniculata_contig3399.9074.1|Name=mRNA_H-paniculata_contig3399.9074.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=75bp IFEHKLKEDGSVVRYKARVVAQGFSQMEGKGFFGTSAPAARMSTLRTVFSback to top mRNA from alignment at H-paniculata_contig3399:12706..13917- Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig3399.9074.1 ID=mRNA_H-paniculata_contig3399.9074.1|Name=mRNA_H-paniculata_contig3399.9074.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=1212bp|location=Sequence derived from alignment at H-paniculata_contig3399:12706..13917- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig3399:12706..13917- >mRNA_H-paniculata_contig3399.9074.1 ID=mRNA_H-paniculata_contig3399.9074.1|Name=mRNA_H-paniculata_contig3399.9074.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=450bp|location=Sequence derived from alignment at H-paniculata_contig3399:12706..13917- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |