prot_H-paniculata_contig3399.9073.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig3399.9073.1
Unique Nameprot_H-paniculata_contig3399.9073.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length135
Homology
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BLAST of mRNA_H-paniculata_contig3399.9073.1 vs. uniprot
Match: D8LTG5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LTG5_ECTSI)

HSP 1 Score: 137 bits (344), Expect = 1.520e-38
Identity = 77/143 (53.85%), Postives = 95/143 (66.43%), Query Frame = 0 
Query:    1 MHSVIRLAARTTSGRGG-------NGISRL----ISEALLVKGENLELTVTSAVRSMDAHLAVAPLQWICLVCLSSLHSLDARVSDLFIARNGCRLLQRCLLVNARHTGVIEQGCRLVAGMSERSFTSRTRFFVEKIPDTVHE 132
            MHSVIR+A R  S +         +G  RL    +SEAL  +G  L+   +   + MD H AVAPL WICLVCL  LH+L+ARVSD+FI   GC++L RC+ +NARHT V+EQ CR+VA MSE SFTSRTRF VE I D +HE
Sbjct:    1 MHSVIRIARREQSPKDPPAGHVTKDGPERLSDNRVSEALH-RGNKLDQQASLLAQVMDVHQAVAPLLWICLVCLIDLHALEARVSDIFIINAGCQVLHRCIRINARHTAVVEQVCRVVAVMSEPSFTSRTRFMVENIQDAIHE 142
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig3399.9073.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LTG5_ECTSI1.520e-3853.85Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig3399contigH-paniculata_contig3399:9630..10471 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig3399.9073.1mRNA_H-paniculata_contig3399.9073.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig3399 9630..10471 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig3399.9073.1 ID=prot_H-paniculata_contig3399.9073.1|Name=mRNA_H-paniculata_contig3399.9073.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=135bp
MHSVIRLAARTTSGRGGNGISRLISEALLVKGENLELTVTSAVRSMDAHL
AVAPLQWICLVCLSSLHSLDARVSDLFIARNGCRLLQRCLLVNARHTGVI
EQGCRLVAGMSERSFTSRTRFFVEKIPDTVHEVR*
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