mRNA_H-paniculata_contig33971.9071.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig33971.9071.1 vs. uniprot
Match: D8LK66_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LK66_ECTSI) HSP 1 Score: 246 bits (627), Expect = 3.170e-78 Identity = 122/174 (70.11%), Postives = 138/174 (79.31%), Query Frame = 1
Query: 1 VIDTAWRGQAGLDVV-SGEGSRNWADITNRKVLVAGDVFALTMFAYVGRASHGMGELDLAVLATAAPFIIGWLAASPLLGAYTNTATASMDDMRKTLLPAWAVSIPAGIFLRALSKGGEMPPIPFAVTSMIFTLIALGVWRGVYTAFNPTSNGEFKKGGILDGFRMITTLLQRW 519
V DTAWRGQAGLDV + +GSR+W+D++ RK L GD ALTMFAYVGRASHGM DL VL TA PF+IGWLA SPLLGAYT +AT + K LLPAW +SIP GIFLRALSKGGE+PP+PFAVTSMIFTL AL WR +YTA NPT G+ K+ G+LDGFRMITTLLQRW
Sbjct: 190 VTDTAWRGQAGLDVTDAADGSRDWSDLSARKGLAVGDAVALTMFAYVGRASHGMASFDLGVLLTALPFLIGWLAVSPLLGAYTRSATETPGGAAKALLPAWGISIPVGIFLRALSKGGEVPPVPFAVTSMIFTLAALMAWRQLYTAVNPTGEGD-KQAGLLDGFRMITTLLQRW 362
BLAST of mRNA_H-paniculata_contig33971.9071.1 vs. uniprot
Match: A0A835ZDH1_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZDH1_9STRA) HSP 1 Score: 204 bits (518), Expect = 6.560e-63 Identity = 102/173 (58.96%), Postives = 122/173 (70.52%), Query Frame = 1
Query: 1 VIDTAWRGQAGLDVVSGEGSRNWADITNRKVLVAGDVFALTMFAYVGRASHGMGELDLAVLATAAPFIIGWLAASPLLGAYTNTATASMDDMRKTLLPAWAVSIPAGIFLRALSKGGEMPPIPFAVTSMIFTLIALGVWRGVYTAFNPTSNGEFKKGGILDGFRMITTLLQRW 519
V+DTAW GQAG+DV GS+ WADI+ R L AGDV ALT+FA +GR H +D+ V TA PF IGWL SPLLGAYTN ATA+ DM TL+PAWAVSIP + +R KG ++PP+PF + S+I T L WRG+Y NPTS E K+GGILDGFRMITTLL+RW
Sbjct: 102 VLDTAWSGQAGMDVTV-VGSKTWADISKRLGLAAGDVIALTVFASIGRGVHTGSGIDVEVFKTALPFYIGWLGLSPLLGAYTNQATATQKDMISTLVPAWAVSIPVALAIRGAVKG-DVPPVPFIIVSLIATGSLLAAWRGLYVVINPTSTAETKRGGILDGFRMITTLLRRW 272
BLAST of mRNA_H-paniculata_contig33971.9071.1 vs. uniprot
Match: A0A7S2UZN6_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UZN6_9STRA) HSP 1 Score: 188 bits (477), Expect = 1.340e-56 Identity = 89/170 (52.35%), Postives = 115/170 (67.65%), Query Frame = 1
Query: 10 TAWRGQAGLDVVSGEGSRNWADITNRKVLVAGDVFALTMFAYVGRASHGMGELDLAVLATAAPFIIGWLAASPLLGAYTNTATASMDDMRKTLLPAWAVSIPAGIFLRALSKGGEMPPIPFAVTSMIFTLIALGVWRGVYTAFNPTSNGEFKKGGILDGFRMITTLLQRW 519
T W GQAGLDV S G+RNW+D+ R +L GD+ L +F+Y+GRASHG ++D +L TAAPF+ GWL +PL GAYT A K++ AW SIPAGIF RAL+KGGE+PP F SM TL+ L WR ++ N + + EF+ GGI+DGFRMITTL++RW
Sbjct: 113 TQWSGQAGLDV-SEPGNRNWSDLATRPLLTLGDMATLVLFSYIGRASHGNPQVDWGLLGTAAPFLAGWLLLAPLAGAYTRQAVTDQGSSAKSVAVAWVASIPAGIFARALTKGGEIPPTSFIAVSMTATLVLLLTWRAIFVKVNGSPDKEFRDGGIIDGFRMITTLIKRW 281
BLAST of mRNA_H-paniculata_contig33971.9071.1 vs. uniprot
Match: R7QL50_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QL50_CHOCR) HSP 1 Score: 160 bits (406), Expect = 8.080e-44 Identity = 78/171 (45.61%), Postives = 107/171 (62.57%), Query Frame = 1
Query: 7 DTAWRGQAGLDVVSGEGSRNWADITNRKVLVAGDVFALTMFAYVGRASHGMGELDLAVLATAAPFIIGWLAASPLLGAYTNTATASMDDMRKTLLPAWAVSIPAGIFLRALSKGGEMPPIPFAVTSMIFTLIALGVWRGVYTAFNPTSNGEFKKGGILDGFRMITTLLQRW 519
D W GQAG+D G+ N++D+ R L GD A +FAY+G+ASHG L+ V+ TA PFI+ WLA SPLLGAYT ATA++ KT +WA+++P GI LR + +PP FAV +++ T +G WR +YT E ++GGILDGF M++TLL+RW
Sbjct: 337 DVNWSGQAGVDTPGSSGTSNYSDLGKRLDLALGDTAAFLLFAYIGKASHGDKSLNFGVVQTATPFIVAWLATSPLLGAYTRAATANVAATVKTFAKSWAIAVPMGIGLRGVLTD-HVPPAVFAVVTLVSTFAIVGGWRVLYTKIRGDETDEARRGGILDGFNMVSTLLRRW 506
BLAST of mRNA_H-paniculata_contig33971.9071.1 vs. uniprot
Match: A0A2V3IEJ3_9FLOR (Adenylate kinase, chloroplastic n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IEJ3_9FLOR) HSP 1 Score: 159 bits (403), Expect = 1.200e-43 Identity = 80/171 (46.78%), Postives = 107/171 (62.57%), Query Frame = 1
Query: 7 DTAWRGQAGLDVVSGEGSRNWADITNRKVLVAGDVFALTMFAYVGRASHGMGELDLAVLATAAPFIIGWLAASPLLGAYTNTATASMDDMRKTLLPAWAVSIPAGIFLRALSKGGEMPPIPFAVTSMIFTLIALGVWRGVYTAFNPTSNGEFKKGGILDGFRMITTLLQRW 519
D W GQA D G+ ++AD+ R LV GDV AL FAY+GR SHG LD VL TAAPFI WL +SPLLGAYT ATA++ K + AWAV++P GI LR + +PP+ FAV S++ TL+ +G WR +Y ++GG+++ F+M+TTLL+RW
Sbjct: 300 DVNWSGQATADTPESAGTSSYADLARRLDLVLGDVLALVSFAYIGRYSHGNKSLDFEVLKTAAPFISAWLISSPLLGAYTRAATANIPATLKYFVRAWAVAVPMGIGLRGVVTD-HVPPVVFAVISLVATLLLMGSWRTLYVLIRGDETDSARRGGVVETFKMVTTLLRRW 469
BLAST of mRNA_H-paniculata_contig33971.9071.1 vs. uniprot
Match: W7TIG6_9STRA (Uncharacterized protein n=3 Tax=Monodopsidaceae TaxID=425072 RepID=W7TIG6_9STRA) HSP 1 Score: 150 bits (379), Expect = 1.970e-41 Identity = 84/177 (47.46%), Postives = 110/177 (62.15%), Query Frame = 1
Query: 1 VIDTAWRGQAGLDVVSGEGSRNWADITNRKVLVAGDVFALTMFAYVGRASHGMG-ELDLAVLATAAPFIIGWLAASPLLGAYTNTATASMDDMRKTLLPAWAVSIPAGIFLRALSKGGEMPPIPFAVTSMIFTLIALGVWRG--VYTAFNPTSNGEF-KKGGILDGFRMITTLLQRW 519
V +TAW GQAGLDV G NW D+ R +L GDV +FA VGR+ H G LD+ V+ TAAPFI+ WL +PLLGAYT A+ S + KT+L AWA+++P G+ R L KG E+PP+PF +M+ TL+ L WR V A GE K+ G+ D F+M+TTL+ RW
Sbjct: 146 VAETAWSGQAGLDVRR-VGENNWKDVGARPLLALGDVLMFLLFASVGRSIHTGGLSLDVQVVQTAAPFILAWLGLAPLLGAYTPEASRSTGNAVKTVLKAWALAVPGGLVGRGLLKG-EVPPVPFMAVTMVTTLVLLTAWRVAVVAVAGGEVEGGEGNKRSGLFDVFKMVTTLIGRW 320
BLAST of mRNA_H-paniculata_contig33971.9071.1 vs. uniprot
Match: A0A1X6P744_PORUM (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6P744_PORUM) HSP 1 Score: 150 bits (378), Expect = 3.170e-40 Identity = 76/168 (45.24%), Postives = 100/168 (59.52%), Query Frame = 1
Query: 16 WRGQAGLDVVSGEGSRNWADITNRKVLVAGDVFALTMFAYVGRASHGMGELDLAVLATAAPFIIGWLAASPLLGAYTNTATASMDDMRKTLLPAWAVSIPAGIFLRALSKGGEMPPIPFAVTSMIFTLIALGVWRGVYTAFNPTSNGEFKKGGILDGFRMITTLLQRW 519
W GQAG+DV + ++AD+ +L AGDV FA +G ASH L+V TAAPFI+ WLA +PL+GAYT A + T AW V +P+G+ LR + +PP FAV +++ T + LGVWRG Y E K+GG+LDGFRMITTLL+RW
Sbjct: 272 WSGQAGVDVNTPAAPPSYADMAAHPLLAAGDVAVFLAFATIGAASHAANANPLSVTLTAAPFIVAWLAVAPLMGAYTRRAVGTYQGAAVTTARAWLVGVPSGLALRGVVTS-HLPPPSFAVVTLLSTAVLLGVWRGSYVKLRGAEVAEGKRGGVLDGFRMITTLLRRW 438
BLAST of mRNA_H-paniculata_contig33971.9071.1 vs. uniprot
Match: A0A5J4YRR5_PORPP (Adenylate kinase 8 n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YRR5_PORPP) HSP 1 Score: 128 bits (321), Expect = 4.360e-31 Identity = 72/171 (42.11%), Postives = 102/171 (59.65%), Query Frame = 1
Query: 7 DTAWRGQAGLDVVSGEGSRNWADITNRKVLVAGDVFALTMFAYVGRASHGMGELDLAVLATAAPFIIGWLAASPLLGAYTNTATASMDDMRKTLLPAWAVSIPAGIFLRALSKGGEMPPIPFAVTSMIFTLIALGVWRGVYTAFNPTSN-GEFKKGGILDGFRMITTLLQR 516
+T + GQAG D+ GS ++ DI NR VL AGD+ +FA +G+ +H L+ L A PF +GW+ SP+LGAYT AT+S + + + V++P G+ +R L +PP FA +MI LI L WR Y + TS+ G K+GG+LDGF+MITTLL+R
Sbjct: 575 NTNYSGQAGADLAIATGSSSYGDILNRPVLAAGDLSMFLVFASIGQMNHKESVDLLSTLQVAFPFALGWVLGSPVLGAYTAAATSSQSAVLACVARSALVALPLGLAIRGLETS-HVPPPSFAGIAMITNLILLSAWRSAYISVAGTSDPGPEKRGGLLDGFKMITTLLRR 744
BLAST of mRNA_H-paniculata_contig33971.9071.1 vs. uniprot
Match: A0A0G4HX28_9ALVE (Uncharacterized protein n=1 Tax=Chromera velia CCMP2878 TaxID=1169474 RepID=A0A0G4HX28_9ALVE) HSP 1 Score: 123 bits (308), Expect = 9.480e-31 Identity = 73/177 (41.24%), Postives = 109/177 (61.58%), Query Frame = 1
Query: 7 DTAWRGQAGLDVVSG-EGSRNWADITNRKVLVAGDVFALTMFAYVGRASHGM----GELDLAVLATAAPFIIGWLAASPLLGAYTNTATASMDDMRKTLLPAWAVSIPAGIFLRALSKGGEMPPIPFAVTSMIFTLIALGVWRGVYTAFNPTSNGEF-KKGGILDGFRMITTLLQRW 519
+T+W GQAG+D V +G+ WA + RK+L+AGD+ AL +FA++GRASHG G L+L V TAAPFI GWLA +P LGA+T +T ++ A A+S+P G+ +RA KG E+PP F S++ T L WR +YT + + ++ ++D +M+ TL++RW
Sbjct: 165 ETSWSGQAGMDEVENFDGA--WAALPKRKLLLAGDLLALYLFAFIGRASHGEDVSGGLLNLEVWQTAAPFIAGWLALAPPLGAFTRGSTMTVQMAAMEGAKAAALSMPLGVCIRAGLKG-ELPPPVFVGVSILTTFTFLVGWRALYTKIRGQEDEDGNREENLVDTVKMVLTLIKRW 338
BLAST of mRNA_H-paniculata_contig33971.9071.1 vs. uniprot
Match: A0A199UXD9_ANACO (Uncharacterized protein (Fragment) n=1 Tax=Ananas comosus TaxID=4615 RepID=A0A199UXD9_ANACO) HSP 1 Score: 99.8 bits (247), Expect = 1.660e-23 Identity = 56/149 (37.58%), Postives = 81/149 (54.36%), Query Frame = 1
Query: 91 VLVAGDVFALTMFAYVGRASHGMGELDLAVLATAAPFIIGWLAASPLLGAYTNTATASMDDMRKTLLPA--WAVSIPAGIFLRALSKGGEMPPIPFAVTSMIFTLIALGVWRGVYTAF----NPTSNGEFKKGGILDGFRMITTLLQRW 519
+L GDV L +F+ VGR SHG LD L TA PFI GW+ ++ LGAY + M+ A WAV IP GI +RA++ G +PPI F + +M T + L VWR + + N +++G + F ++TTL++RW
Sbjct: 7 LLAGGDVLCLLIFSAVGRFSHGFAVLDFETLKTADPFIAGWILSAYFLGAYGDDGKGMNGSMKAITAAAKSWAVGIPLGIIIRAVTSG-HIPPINFILVTMASTGVLLLVWRALVSNLLSGRQSKQNDVYRQGSPFELFELLTTLVRRW 154 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig33971.9071.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig33971.9071.1 >prot_H-paniculata_contig33971.9071.1 ID=prot_H-paniculata_contig33971.9071.1|Name=mRNA_H-paniculata_contig33971.9071.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=174bp VIDTAWRGQAGLDVVSGEGSRNWADITNRKVLVAGDVFALTMFAYVGRASback to top mRNA from alignment at H-paniculata_contig33971:1000..2237+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig33971.9071.1 ID=mRNA_H-paniculata_contig33971.9071.1|Name=mRNA_H-paniculata_contig33971.9071.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=1238bp|location=Sequence derived from alignment at H-paniculata_contig33971:1000..2237+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig33971:1000..2237+ >mRNA_H-paniculata_contig33971.9071.1 ID=mRNA_H-paniculata_contig33971.9071.1|Name=mRNA_H-paniculata_contig33971.9071.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1044bp|location=Sequence derived from alignment at H-paniculata_contig33971:1000..2237+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |