mRNA_H-paniculata_contig3358.8989.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig3358.8989.1 vs. uniprot
Match: D7FLQ8_ECTSI (Dynein heavy chain n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLQ8_ECTSI) HSP 1 Score: 393 bits (1010), Expect = 9.790e-123 Identity = 194/228 (85.09%), Postives = 213/228 (93.42%), Query Frame = 1
Query: 1 QEWAPFGPHQNMKWVILDGDIDAVWIESMNTVMDDNKVLTLVSNERIPLTASMRMIFEIHSLKNATPATVSRAGILFVNETDIGWNPFMESWVQARPLESEKVVLEGLFHRHVPAIIDILKKGKMEPLVPIPIISMVQAVCLLLEGLLPAVVDKTAEASPRRLSMERMFLFAAMWAFGGALSSDSKCDNRRRFSQEWRKLLPSKTVKLPEQGLVFDYFVNPENGEVAR 684
+EWAPFG HQN KWVILDGDIDAVWIESMNTVMDDNKVLTLVSNERIPLTA+MRMIFEIHSLKNATPATVSRAGILFVNETDIGW+P++ESWVQARP+ESEKVVLEGLF+RHVP I+++LKK KMEPLVPIP I+MVQAVC LLEGLLPA+ DKT+E +MER+FLFAAMWAFGGALSSDSKCD+R+ FSQEWRKLLPSK+VKLP+QGLVFDYFVNPENGEV R
Sbjct: 2507 KEWAPFGLHQNHKWVILDGDIDAVWIESMNTVMDDNKVLTLVSNERIPLTAAMRMIFEIHSLKNATPATVSRAGILFVNETDIGWHPYVESWVQARPVESEKVVLEGLFNRHVPDILEMLKKAKMEPLVPIPTINMVQAVCRLLEGLLPALTDKTSE------NMERVFLFAAMWAFGGALSSDSKCDDRKVFSQEWRKLLPSKSVKLPDQGLVFDYFVNPENGEVGR 2728
BLAST of mRNA_H-paniculata_contig3358.8989.1 vs. uniprot
Match: F0XZT7_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0XZT7_AURAN) HSP 1 Score: 280 bits (715), Expect = 4.360e-83 Identity = 138/227 (60.79%), Postives = 172/227 (75.77%), Query Frame = 1
Query: 1 QEWAPFGPHQNMKWVILDGDIDAVWIESMNTVMDDNKVLTLVSNERIPLTASMRMIFEIHSLKNATPATVSRAGILFVNETDIGWNPFMESWVQARPLESEKVVLEGLFHRHVPAIIDILKKGKMEPLVPIPIISMVQAVCLLLEGLLPAVVDKTAEASPRRLSMERMFLFAAMWAFGGALSSDSKCDNRRRFSQEWRKLLPSKTVKLPEQGLVFDYFVNPENGEVA 681
+EW+P+ HQ KWV+LDGDIDAVWIESMNTVMDDNKVLTLVSNERIPLT SMRM+FEIHSLKNATPATVSRAGIL+VNE DIGW PF ESW+ R E+E + GLF ++VP +ID+LK+ K+E L P+ IS V ++C LLEGLL V D A+ + +ER+FL+A++W FGG ++D D+RR FS WR+ K +K PE GLVF+Y+V+P GE+A
Sbjct: 2317 KEWSPYAAHQTYKWVVLDGDIDAVWIESMNTVMDDNKVLTLVSNERIPLTESMRMVFEIHSLKNATPATVSRAGILYVNELDIGWLPFAESWIHDRTHETELATMPGLFDKYVPQMIDLLKERKVETLTPVMTISRVTSLCYLLEGLLAQVPD----AAKDQERIERLFLYASVWVFGGVAAADKTVDSRRSFSDAWRQTF--KALKFPEGGLVFEYYVDPSTGELA 2537
BLAST of mRNA_H-paniculata_contig3358.8989.1 vs. uniprot
Match: A0A8J2SDE7_9STRA (Hypothetical protein n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SDE7_9STRA) HSP 1 Score: 249 bits (636), Expect = 1.790e-72 Identity = 127/225 (56.44%), Postives = 164/225 (72.89%), Query Frame = 1
Query: 7 WAPFGPHQNMKWVILDGDIDAVWIESMNTVMDDNKVLTLVSNERIPLTASMRMIFEIHSLKNATPATVSRAGILFVNETDIGWNPFMESWVQARPLESEKVVLEGLFHRHVPAIIDILKKGKMEPLVPIPIISMVQAVCLLLEGLLPAVVDKTAEASPRRLSMERMFLFAAMWAFGGALSSDSKCDNRRRFSQEWRKLLPSKTVKLPEQGLVFDYFVNPENGEVA 681
W P+ Q +WV+LDGDIDAVWIESMNTVMDDNKVLTLVSNERIPLT +MRM+FEI SL+NATPATVSRAGILF+NETDIGW PF SW + R ++EK L G F +++P +I +LK+ +E L P+ IS V A+C LLEG L AV + +E R+ ER+FL+A +WAFGG ++D D+R+ F++ WR + +KLPE GL F+Y V+P +G+V
Sbjct: 2293 WQPYTSAQTDQWVVLDGDIDAVWIESMNTVMDDNKVLTLVSNERIPLTPAMRMVFEIESLRNATPATVSRAGILFINETDIGWAPFATSWTERRDSDTEKSCLPGFFDKYIPQLIAMLKEKGVEYLTPVMTISKVSALCHLLEGYLSAVPE--SEKDGHRI--ERLFLYACIWAFGGCAAADKTTDSRQLFNEVWRDVAKGG-LKLPEAGLCFEYAVDPASGDVC 2512
BLAST of mRNA_H-paniculata_contig3358.8989.1 vs. uniprot
Match: A0A482SY26_9ARCH (Uncharacterized protein (Fragment) n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SY26_9ARCH) HSP 1 Score: 248 bits (633), Expect = 4.370e-72 Identity = 127/223 (56.95%), Postives = 162/223 (72.65%), Query Frame = 1
Query: 13 PFGPHQNMKWVILDGDIDAVWIESMNTVMDDNKVLTLVSNERIPLTASMRMIFEIHSLKNATPATVSRAGILFVNETDIGWNPFMESWVQARPLESEKVVLEGLFHRHVPAIIDILKKGKMEPLVPIPIISMVQAVCLLLEGLLPAVVDKTAEASPRRLSMERMFLFAAMWAFGGALSSDSKCDNRRRFSQEWRKLLPSKTVKLPEQGLVFDYFVNPENGEVA 681
P+ Q KWV+LDGDIDAVWIESMNTVMDDNKVLTLVSNERIPL+ SMRMIFEIHSLKNATPATVSRAGIL++N+TDIG+ P++ESW+ +R E EK L L R++ +I+ L K E +VP+PII++VQ++C LL+G L + + +A+ MER+FLF MWAFGG L+SD + D R+ FS +R L +K +K PE V D F++P GE
Sbjct: 360 PYSASQTAKWVVLDGDIDAVWIESMNTVMDDNKVLTLVSNERIPLSESMRMIFEIHSLKNATPATVSRAGILYINDTDIGYGPYLESWLASRTNELEKAYLPYLTSRYLTKVIEFLAVSKPEKIVPLPIINLVQSLCYLLDGFLKSFTGEKNQAA-----MERIFLFCLMWAFGGPLTSDKQTDFRKMFSNFFRTL--TKAIKFPETASVLDCFIDPLTGEAV 575
BLAST of mRNA_H-paniculata_contig3358.8989.1 vs. uniprot
Match: A0A329S004_9STRA (Dynein beta chain, flagellar outer arm n=23 Tax=Peronosporaceae TaxID=4777 RepID=A0A329S004_9STRA) HSP 1 Score: 238 bits (607), Expect = 1.410e-68 Identity = 128/221 (57.92%), Postives = 158/221 (71.49%), Query Frame = 1
Query: 16 FGPHQNMKWVILDGDIDAVWIESMNTVMDDNKVLTLVSNERIPLTASMRMIFEIHSLKNATPATVSRAGILFVNETDIGWNPFMESWVQARPLESEKVVLEGLFHRHVPAIIDILKKGKMEPLVPIPIISMVQAVCLLLEGLLPAV-VDKTAEASPRRLSMERMFLFAAMWAFGGALSSDSKCDNRRRFSQEWRKLLPSKTVKLPEQGLVFDYFVNPENGE 675
F Q+ KWV+LDGDIDAVWIESMNTVMDDNKVLTLVSNERIPL+++MRM+FEI+SLKNATPATVSRAGILF+NE DIGW PFMESWV R E E+ L GLF ++V I D+++KG + + P+ +I+ V +C LLEGLL + VDK +P + E +F+F A WAFGG L D D R+ F + W + VK P++GL FDYF N E GE
Sbjct: 2236 FYESQSYKWVVLDGDIDAVWIESMNTVMDDNKVLTLVSNERIPLSSAMRMVFEINSLKNATPATVSRAGILFINEIDIGWRPFMESWVAKREEEVERTYLPGLFDKYVDPIYDLMRKGYKQ-VAPVRLINQVSTICYLLEGLLGNIPVDKK---NPEVI--ESIFVFCATWAFGGPLIVDKSIDYRKNFHELWCSTFTN--VKYPKEGLCFDYFYNLEAGE 2448
BLAST of mRNA_H-paniculata_contig3358.8989.1 vs. uniprot
Match: A0A662XP47_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662XP47_9STRA) HSP 1 Score: 236 bits (603), Expect = 3.090e-68 Identity = 124/220 (56.36%), Postives = 157/220 (71.36%), Query Frame = 1
Query: 16 FGPHQNMKWVILDGDIDAVWIESMNTVMDDNKVLTLVSNERIPLTASMRMIFEIHSLKNATPATVSRAGILFVNETDIGWNPFMESWVQARPLESEKVVLEGLFHRHVPAIIDILKKGKMEPLVPIPIISMVQAVCLLLEGLLPAVVDKTAEASPRRLSMERMFLFAAMWAFGGALSSDSKCDNRRRFSQEWRKLLPSKTVKLPEQGLVFDYFVNPENGE 675
F Q+ KWV+LDGDIDAVWIESMNTVMDDNKVLTLVSNERIPL+A+MRM+FEI+SLKNATPATVSRAGIL++NE DIGW PFMESWV R E E+ L GLF ++V I D+++KG + + P+ +I+ V +C LLEGLL + + + +P + E +F+F A WAFGG L D D R+ F + W S +K P++GL FD+F N E GE
Sbjct: 360 FYESQSYKWVVLDGDIDAVWIESMNTVMDDNKVLTLVSNERIPLSAAMRMVFEINSLKNATPATVSRAGILYINEIDIGWRPFMESWVAKREEEVERTYLPGLFDKYVDTIYDLMRKGYKQ-VAPVRLINQVSTICYLLEGLLGNIPME--KKNPEVI--ESIFVFCATWAFGGPLIVDKSIDYRKNFHELWCSTFTS--IKYPKEGLCFDFFYNLETGE 572
BLAST of mRNA_H-paniculata_contig3358.8989.1 vs. uniprot
Match: A0A6A4E4A7_9STRA (Dynein beta chain, flagellar outer arm (Fragment) n=3 Tax=Phytophthora TaxID=4783 RepID=A0A6A4E4A7_9STRA) HSP 1 Score: 236 bits (602), Expect = 6.520e-68 Identity = 125/222 (56.31%), Postives = 155/222 (69.82%), Query Frame = 1
Query: 16 FGPHQNMKWVILDGDIDAVWIESMNTVMDDNKVLTLVSNERIPLTASMRMIFEIHSLKNATPATVSRAGILFVNETDIGWNPFMESWVQARPLESEKVVLEGLFHRHVPAIIDILKKGKMEPLVPIPIISMVQAVCLLLEGLLP--AVVDKTAEASPRRLSMERMFLFAAMWAFGGALSSDSKCDNRRRFSQEWRKLLPSKTVKLPEQGLVFDYFVNPENGE 675
F Q KWV+LDGDIDAVWIESMNTVMDDNKVLTLVSNERIPL+++MRM+FEI+SLKNATPATVSRAGILF+NE DIGW PFMESWV R E E+ L GLF ++V I D+++KG + + P+ +I+ V +C LLEGLL + K E +E +F+F A WAFGG L D D R+ F + W + VK P++GL FDYF N ++GE
Sbjct: 2232 FYESQTYKWVVLDGDIDAVWIESMNTVMDDNKVLTLVSNERIPLSSAMRMVFEINSLKNATPATVSRAGILFINEIDIGWRPFMESWVAKREEEVERTYLPGLFDKYVDPIYDLMRKGYKQ-VAPVRLINQVSTICYLLEGLLGNIPIEKKNPEV------IESIFVFCATWAFGGPLIVDKSIDYRKNFHELWCSTFTN--VKYPKEGLCFDYFYNLDSGE 2444
BLAST of mRNA_H-paniculata_contig3358.8989.1 vs. uniprot
Match: K3X373_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3X373_GLOUD) HSP 1 Score: 236 bits (602), Expect = 6.590e-68 Identity = 123/217 (56.68%), Postives = 154/217 (70.97%), Query Frame = 1
Query: 28 QNMKWVILDGDIDAVWIESMNTVMDDNKVLTLVSNERIPLTASMRMIFEIHSLKNATPATVSRAGILFVNETDIGWNPFMESWVQARPLESEKVVLEGLFHRHVPAIIDILKKGKMEPLVPIPIISMVQAVCLLLEGLLPAV-VDKTAEASPRRLSMERMFLFAAMWAFGGALSSDSKCDNRRRFSQEWRKLLPSKTVKLPEQGLVFDYFVNPENGE 675
Q KWV+LDGDIDAVWIESMNTVMDDNKVLTLVSNERIPL+++MRM+FEI+SLKNATPATVSRAGILF+NETDIGW PFMESWV R E E+ L GLF ++V D+++KG + + P+ +I+ V +C LLEGLL V DK + +E +F++ A WAFGG L D D R+ F + W + +K P++GL FDYF N E+ E
Sbjct: 2116 QTYKWVVLDGDIDAVWIESMNTVMDDNKVLTLVSNERIPLSSAMRMVFEINSLKNATPATVSRAGILFINETDIGWRPFMESWVAKREEEIERTYLPGLFDKYVDTTYDLMRKGYKQ-VAPVRLINQVSTICYLLEGLLGNVPADKKTQEV-----IESIFVYCATWAFGGPLIVDKSIDYRKNFHELW--IATFTNIKYPKEGLCFDYFYNLESNE 2324
BLAST of mRNA_H-paniculata_contig3358.8989.1 vs. uniprot
Match: A0A2D4BRA7_PYTIN (Sporangia induced dynein heavy chain n=2 Tax=Pythium TaxID=4797 RepID=A0A2D4BRA7_PYTIN) HSP 1 Score: 234 bits (597), Expect = 3.070e-67 Identity = 127/222 (57.21%), Postives = 152/222 (68.47%), Query Frame = 1
Query: 16 FGPHQNMKWVILDGDIDAVWIESMNTVMDDNKVLTLVSNERIPLTASMRMIFEIHSLKNATPATVSRAGILFVNETDIGWNPFMESWVQARPLESEKVVLEGLFHRHVPAIIDILKKGKMEPLVPIPIISMVQAVCLLLEGLLPAVVD--KTAEASPRRLSMERMFLFAAMWAFGGALSSDSKCDNRRRFSQEWRKLLPSKTVKLPEQGLVFDYFVNPENGE 675
F Q KWV+LDGDIDAVWIESMNTVMDDNKVLTLVSNERIPL+ +MRM+FEI+SLKNATPATVSRAGILF+NETDIGW PFMESWV R E E+ L LF R+V ++ +KG + + P+ +I+ V +C LLEGLL AV KT + +E +F+F A WAFGG L D D R+ F + W P+ VK P+ GL FDYF N E E
Sbjct: 1821 FYESQTYKWVVLDGDIDAVWIESMNTVMDDNKVLTLVSNERIPLSDAMRMVFEINSLKNATPATVSRAGILFINETDIGWRPFMESWVAKRVEEVERTFLPALFDRYVDTTYEMTRKGYKQ-VAPVRLINQVSTICYLLEGLLTAVPPERKTQDI------IEAVFVFCATWAFGGPLIVDKSVDYRKNFHELWIATFPN--VKYPKDGLCFDYFWNVETNE 2033
BLAST of mRNA_H-paniculata_contig3358.8989.1 vs. uniprot
Match: A0A0S7HQT5_9TELE (DYH9 (Fragment) n=1 Tax=Poeciliopsis prolifica TaxID=188132 RepID=A0A0S7HQT5_9TELE) HSP 1 Score: 220 bits (560), Expect = 4.120e-67 Identity = 112/215 (52.09%), Postives = 152/215 (70.70%), Query Frame = 1
Query: 25 HQNMKWVILDGDIDAVWIESMNTVMDDNKVLTLVSNERIPLTASMRMIFEIHSLKNATPATVSRAGILFVNETDIGWNPFMESWVQARPLESEKVVLEGLFHRHVPAIIDILKKGKMEPLVPIPIISMVQAVCLLLEGLLPAVVDKTAEASPRRLSMERMFLFAAMWAFGGALSSDSKCDNRRRFSQEWRKLLPSKTVKLPEQGLVFDYFVNPEN 669
H KW++LDGDID +WIES+NTVMDDNKVLTL SNERIPL +MR++FEI L+ ATPATVSRAGIL++N D+GW+P + SW+ R ++SEK L LF +++P+ +D+LK + + ++PIP S+VQ +C LLE LL + T S + L E F+FA++WAFGGAL D D R FS+ W + KT+K P QG VFDY+++PE+
Sbjct: 147 HSGPKWIVLDGDIDPMWIESLNTVMDDNKVLTLASNERIPLNPTMRLVFEISHLRTATPATVSRAGILYINPADLGWSPQVSSWIDKREVQSEKANLTILFDKYLPSCLDVLK-SRFKKIIPIPEQSLVQMLCYLLECLLTP--ENTPPDSSKDL-YELYFVFASIWAFGGALFQDQLVDYRVEFSKWW--VAEFKTIKFPSQGTVFDYYIDPES 355 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig3358.8989.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig3358.8989.1 >prot_H-paniculata_contig3358.8989.1 ID=prot_H-paniculata_contig3358.8989.1|Name=mRNA_H-paniculata_contig3358.8989.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=228bp QEWAPFGPHQNMKWVILDGDIDAVWIESMNTVMDDNKVLTLVSNERIPLTback to top mRNA from alignment at H-paniculata_contig3358:897..4456+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig3358.8989.1 ID=mRNA_H-paniculata_contig3358.8989.1|Name=mRNA_H-paniculata_contig3358.8989.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=3560bp|location=Sequence derived from alignment at H-paniculata_contig3358:897..4456+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig3358:897..4456+ >mRNA_H-paniculata_contig3358.8989.1 ID=mRNA_H-paniculata_contig3358.8989.1|Name=mRNA_H-paniculata_contig3358.8989.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1368bp|location=Sequence derived from alignment at H-paniculata_contig3358:897..4456+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |