mRNA_H-paniculata_contig33553.8984.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig33553.8984.1
Unique NamemRNA_H-paniculata_contig33553.8984.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
BLAST of mRNA_H-paniculata_contig33553.8984.1 vs. uniprot
Match: D8LQA7_ECTSI (N-acetyltransferase domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LQA7_ECTSI)

HSP 1 Score: 98.2 bits (243), Expect = 2.080e-23
Identity = 43/61 (70.49%), Postives = 53/61 (86.89%), Query Frame = 1
Query:    4 RPYLSDLAVSRRHRRKGIGTALVRACEEACLEWGYDRMFLKVHDSNLAAQKLYEKIGYDVY 186
            RPYLSDLAV+ R+RR GIGT LV+ACE+AC+EWGYD M+LKV + N+AA+KLYE +GY VY
Sbjct:  184 RPYLSDLAVADRYRRMGIGTELVKACEDACIEWGYDNMYLKVREGNVAAEKLYENLGYVVY 244          
BLAST of mRNA_H-paniculata_contig33553.8984.1 vs. uniprot
Match: A0A7S2A0L2_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2A0L2_TRICV)

HSP 1 Score: 72.4 bits (176), Expect = 1.660e-13
Identity = 36/59 (61.02%), Postives = 41/59 (69.49%), Query Frame = 1
Query:    1 PRPYLSDLAVSRRHRRKGIGTALVRACEEACLEWGYDRMFLKVHDSNLAAQKLYEKIGY 177
            PRPYLSDLAV +  RRKGI T LV  CEE   E GYD M+L+V  SN AA  +YEK+ Y
Sbjct:  214 PRPYLSDLAVRKEWRRKGIATHLVVRCEEKTKEMGYDHMYLRVEQSNDAALNMYEKMDY 272          
BLAST of mRNA_H-paniculata_contig33553.8984.1 vs. uniprot
Match: A0A836C8B6_9STRA (N-acetyltransferase domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C8B6_9STRA)

HSP 1 Score: 66.2 bits (160), Expect = 2.900e-12
Identity = 28/59 (47.46%), Postives = 43/59 (72.88%), Query Frame = 1
Query:    4 RPYLSDLAVSRRHRRKGIGTALVRACEEACLEWGYDRMFLKVHDSNLAAQKLYEKIGYD 180
            RP +S+LAVS R RR GIG++L++AC+E  L WGY  + L+V + N  A+  Y+++G+D
Sbjct:   11 RPVISNLAVSPRMRRFGIGSSLLKACQEEVLSWGYQELVLQVEEDNAGARAFYQRMGFD 69          
BLAST of mRNA_H-paniculata_contig33553.8984.1 vs. uniprot
Match: A0A7S3V7G1_9STRA (Hypothetical protein n=2 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3V7G1_9STRA)

HSP 1 Score: 67.4 bits (163), Expect = 7.600e-12
Identity = 26/60 (43.33%), Postives = 41/60 (68.33%), Query Frame = 1
Query:    1 PRPYLSDLAVSRRHRRKGIGTALVRACEEACLEWGYDRMFLKVHDSNLAAQKLYEKIGYD 180
            PRPYLSDLAV + HRR+G+  +L++ CE+  + WG   ++L+V + N  A  +Y  +GY+
Sbjct:  166 PRPYLSDLAVHKEHRRQGVAKSLIKFCEDESIRWGKKNLYLRVEEKNNGALAMYSDLGYE 225          
BLAST of mRNA_H-paniculata_contig33553.8984.1 vs. uniprot
Match: A0A0D8ZZ74_9CYAN (N-acetyltransferase domain-containing protein n=1 Tax=Aliterella atlantica CENA595 TaxID=1618023 RepID=A0A0D8ZZ74_9CYAN)

HSP 1 Score: 65.5 bits (158), Expect = 1.890e-11
Identity = 29/60 (48.33%), Postives = 42/60 (70.00%), Query Frame = 1
Query:    7 PYLSDLAVSRRHRRKGIGTALVRACEEACLEWGYDRMFLKVHDSNLAAQKLYEKIGYDVY 186
            PYLS+LAV  R RR+GIG  L+  CE   LEWG+  ++L V ++N  A++LY K+GY ++
Sbjct:  122 PYLSNLAVHSRDRRRGIGEQLLLTCERTALEWGFHDIYLHVLENNYQARQLYFKLGYQLH 181          
BLAST of mRNA_H-paniculata_contig33553.8984.1 vs. uniprot
Match: A0A6P0QJ99_9CYAN (GNAT family N-acetyltransferase n=1 Tax=Microcoleus sp. SIO2G3 TaxID=2607795 RepID=A0A6P0QJ99_9CYAN)

HSP 1 Score: 63.5 bits (153), Expect = 5.640e-11
Identity = 27/60 (45.00%), Postives = 43/60 (71.67%), Query Frame = 1
Query:    7 PYLSDLAVSRRHRRKGIGTALVRACEEACLEWGYDRMFLKVHDSNLAAQKLYEKIGYDVY 186
            PY+S+LAVS+  RR+G+   L+ ACE+  L+WG+  ++L V ++N  A++LY K GY +Y
Sbjct:   80 PYISNLAVSKSCRRRGVAKQLLSACEQTALDWGFPDIYLHVLENNHQARQLYLKTGYQLY 139          
BLAST of mRNA_H-paniculata_contig33553.8984.1 vs. uniprot
Match: K9UPU5_CHAP6 (Acetyltransferase n=3 Tax=Chamaesiphon TaxID=217161 RepID=K9UPU5_CHAP6)

HSP 1 Score: 62.8 bits (151), Expect = 1.920e-10
Identity = 27/59 (45.76%), Postives = 38/59 (64.41%), Query Frame = 1
Query:    7 PYLSDLAVSRRHRRKGIGTALVRACEEACLEWGYDRMFLKVHDSNLAAQKLYEKIGYDV 183
            PY+S+LAVSR  RR+G+   L+  CEE    WGY  +FL V   N   + LY+K+GY++
Sbjct:  118 PYISNLAVSRDFRRRGVAQQLLIGCEELTKSWGYTEIFLHVMGDNQRGRNLYQKLGYEI 176          
BLAST of mRNA_H-paniculata_contig33553.8984.1 vs. uniprot
Match: K9XQW1_STAC7 (GCN5-related N-acetyltransferase n=2 Tax=Stanieria TaxID=102115 RepID=K9XQW1_STAC7)

HSP 1 Score: 62.8 bits (151), Expect = 2.170e-10
Identity = 27/60 (45.00%), Postives = 41/60 (68.33%), Query Frame = 1
Query:    7 PYLSDLAVSRRHRRKGIGTALVRACEEACLEWGYDRMFLKVHDSNLAAQKLYEKIGYDVY 186
            PY+S+LAV+R +RR+G+   L+ +CE+  LEWGY    L V + N  A++LY + GY +Y
Sbjct:  127 PYISNLAVARLYRRRGVAQKLLASCEQIALEWGYQETRLHVLEDNQPAKQLYFQRGYQIY 186          
BLAST of mRNA_H-paniculata_contig33553.8984.1 vs. uniprot
Match: A0A846ADR3_9CYAN (GNAT family N-acetyltransferase n=1 Tax=Leptolyngbya sp. SIO4C5 TaxID=2607774 RepID=A0A846ADR3_9CYAN)

HSP 1 Score: 61.6 bits (148), Expect = 5.000e-10
Identity = 25/59 (42.37%), Postives = 42/59 (71.19%), Query Frame = 1
Query:    7 PYLSDLAVSRRHRRKGIGTALVRACEEACLEWGYDRMFLKVHDSNLAAQKLYEKIGYDV 183
            PY+S+LAV ++ RR+G    L++ACE+A   WG+  ++L V + N  A++LY K+GY++
Sbjct:  113 PYVSNLAVDQKFRRRGAARQLLQACEQAARSWGFHTLYLHVMEDNQQARQLYSKMGYNL 171          
BLAST of mRNA_H-paniculata_contig33553.8984.1 vs. uniprot
Match: A0A7S2WDB0_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WDB0_9STRA)

HSP 1 Score: 60.5 bits (145), Expect = 6.040e-10
Identity = 30/59 (50.85%), Postives = 40/59 (67.80%), Query Frame = 1
Query:    4 RPYLSDLAVSRRHRRKGIGTALVRACEE-ACLEWGYDRMFLKVHDSNLAAQKLYEKIGY 177
            RPYL ++AV RR RR+G+G  LVRACE  A  +W Y  ++L V  SN  A +LY++ GY
Sbjct:   45 RPYLCNVAVDRRFRRRGLGVRLVRACEALAQFQWRYSAIYLHVDKSNRGALELYQQRGY 103          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig33553.8984.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LQA7_ECTSI2.080e-2370.49N-acetyltransferase domain-containing protein n=2 ... [more]
A0A7S2A0L2_TRICV1.660e-1361.02Hypothetical protein n=1 Tax=Trieres chinensis Tax... [more]
A0A836C8B6_9STRA2.900e-1247.46N-acetyltransferase domain-containing protein n=1 ... [more]
A0A7S3V7G1_9STRA7.600e-1243.33Hypothetical protein n=2 Tax=Chaetoceros debilis T... [more]
A0A0D8ZZ74_9CYAN1.890e-1148.33N-acetyltransferase domain-containing protein n=1 ... [more]
A0A6P0QJ99_9CYAN5.640e-1145.00GNAT family N-acetyltransferase n=1 Tax=Microcoleu... [more]
K9UPU5_CHAP61.920e-1045.76Acetyltransferase n=3 Tax=Chamaesiphon TaxID=21716... [more]
K9XQW1_STAC72.170e-1045.00GCN5-related N-acetyltransferase n=2 Tax=Stanieria... [more]
A0A846ADR3_9CYAN5.000e-1042.37GNAT family N-acetyltransferase n=1 Tax=Leptolyngb... [more]
A0A7S2WDB0_9STRA6.040e-1050.85Hypothetical protein (Fragment) n=1 Tax=Rhizochrom... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig33553contigH-paniculata_contig33553:258..449 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score98.6
Seed ortholog evalue1.1e-18
Seed eggNOG ortholog2880.D8LQA7
Hectar predicted targeting categoryother localisation
EggNOG free text desc.FR47-like protein
EggNOG OGs2E48C@1,2SB6B@2759
Ec32 ortholog descriptionSecreted acetyltransferase (GNAT) domain protein
Ec32 orthologEc-26_005500.1
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons1
Model size192
Cds size192
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930036.1048837-CDS-H-paniculata_contig33553:257..4491622930036.1048837-CDS-H-paniculata_contig33553:257..449Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig33553 258..449 +
1691481120.107866-CDS-H-paniculata_contig33553:257..4491691481120.107866-CDS-H-paniculata_contig33553:257..449Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig33553 258..449 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig33553.8984.1prot_H-paniculata_contig33553.8984.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig33553 258..449 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig33553.8984.1

>prot_H-paniculata_contig33553.8984.1 ID=prot_H-paniculata_contig33553.8984.1|Name=mRNA_H-paniculata_contig33553.8984.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=64bp
PRPYLSDLAVSRRHRRKGIGTALVRACEEACLEWGYDRMFLKVHDSNLAA
QKLYEKIGYDVYLA
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mRNA from alignment at H-paniculata_contig33553:258..449+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig33553.8984.1 ID=mRNA_H-paniculata_contig33553.8984.1|Name=mRNA_H-paniculata_contig33553.8984.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=192bp|location=Sequence derived from alignment at H-paniculata_contig33553:258..449+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
CCGCGACCGTACCTCTCAGACCTGGCCGTTTCGCGTCGACACCGACGAAA AGGCATCGGCACGGCGCTAGTACGAGCTTGTGAAGAGGCATGTCTAGAGT GGGGCTACGACCGGATGTTTCTAAAAGTGCATGACAGCAACCTCGCTGCG CAGAAGCTATACGAAAAAATAGGATACGATGTGTACTTAGCT
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Coding sequence (CDS) from alignment at H-paniculata_contig33553:258..449+

>mRNA_H-paniculata_contig33553.8984.1 ID=mRNA_H-paniculata_contig33553.8984.1|Name=mRNA_H-paniculata_contig33553.8984.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=384bp|location=Sequence derived from alignment at H-paniculata_contig33553:258..449+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
CCGCGACCGTACCTCTCAGACCTGGCCGTTTCGCGTCGACACCGACGAAA
AGGCATCGGCACGGCGCTAGTACGAGCTTGTGAAGAGGCATGTCTAGAGT
GGGGCTACGACCGGATGTTTCTAAAAGTGCATGACAGCAACCTCGCTGCG
CAGAAGCTATACGAAAAAATAGGATACGATGTGTACTTAGCTCCGCGACC
GTACCTCTCAGACCTGGCCGTTTCGCGTCGACACCGACGAAAAGGCATCG
GCACGGCGCTAGTACGAGCTTGTGAAGAGGCATGTCTAGAGTGGGGCTAC
GACCGGATGTTTCTAAAAGTGCATGACAGCAACCTCGCTGCGCAGAAGCT
ATACGAAAAAATAGGATACGATGTGTACTTAGCT
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