prot_H-paniculata_contig3350.8975.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig3350.8975.1
Unique Nameprot_H-paniculata_contig3350.8975.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length196
Homology
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BLAST of mRNA_H-paniculata_contig3350.8975.1 vs. uniprot
Match: D7FZF2_ECTSI (Autophagy-related protein 9 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZF2_ECTSI)

HSP 1 Score: 80.1 bits (196), Expect = 4.960e-14
Identity = 59/112 (52.68%), Postives = 64/112 (57.14%), Query Frame = 0 
Query:    2 SAAAPSFVQTSQLAPFLLSQMGPPQG-SWAGXXXXXXXXXVLSQFGRSTHGTTP--GPMMGQGQGHEQNFYWLERFYAAHRSHADLSSIVSDDAGLASRAAVGTS-AGLRRH 109
            S A PSFVQTSQLAPFLLSQ+G P G S+AG           S  GR+T    P  GP+     G EQNFYWLERFYAAHRS     S  S D G  + AA   S AGL  H
Sbjct:  764 SMATPSFVQTSQLAPFLLSQIGGPHGGSFAGGAG------APSFLGRTTSNGAPAAGPV-----GQEQNFYWLERFYAAHRSGGAGLSFASGDPGPRTAAATTASLAGLMSH 864
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig3350.8975.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FZF2_ECTSI4.960e-1452.68Autophagy-related protein 9 n=1 Tax=Ectocarpus sil... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig3350contigH-paniculata_contig3350:12791..16598 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig3350.8975.1mRNA_H-paniculata_contig3350.8975.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig3350 12791..16623 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig3350.8975.1 ID=prot_H-paniculata_contig3350.8975.1|Name=mRNA_H-paniculata_contig3350.8975.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=196bp
MSAAAPSFVQTSQLAPFLLSQMGPPQGSWAGGGGGGGGGGVLSQFGRSTH
GTTPGPMMGQGQGHEQNFYWLERFYAAHRSHADLSSIVSDDAGLASRAAV
GTSAGLRRHNSTGFGGGGGGGGFRGPIGTGSAFAPHGANVGSRYVIGRGG
GRADADAGSDGGGGGGGLMSSASRGHDRTSGVVSTARTRDGGVRGS
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