mRNA_H-paniculata_contig114.897.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
Overview
Homology
BLAST of mRNA_H-paniculata_contig114.897.1 vs. uniprot
Match: D8LRQ6_ECTSI (Methyltransferase type 12 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRQ6_ECTSI) HSP 1 Score: 415 bits (1067), Expect = 2.490e-141 Identity = 199/231 (86.15%), Postives = 215/231 (93.07%), Query Frame = 1 Query: 196 MQECMDMLTEKSKQGNEMVADLVQSLGSALVYPDAGNLETNRKLWDNYAAEWEPSAGWVQKMAGGSNADRLEVVGDEWSTRDEVLRVINDFILPNVTEESTVGEIGCGGGRVTLEVFRQAGQLTCFDISKNMLKRTHEAVGEEPCAGGGKVKFVLLSEARLPENATNSLDFVILYDVLVHVDLHVTNKYVREIFRVLKPGGKAFLSTANFLSPGGWDRFIAQDKYTVGGFY 888 MQEC+D LTEKSK GNEMV++LVQSLGSALVYPDAGN +TNRKLWDNYAAEWEP A WVQKMA GS +RLEVVGDEWSTRD+V+RVINDFILPNVTEES VGEIGCGGGRVT+EVFR+AGQLTCFDISKNMLKRT +AVGE CAGGGKV FVLLS+ RLPENA++SLDFVILYDVLVHVDLH+TNKY+REI RVLKPGGKAFLSTANFLSPGGWDRF AQDKY+VGGFY Sbjct: 1 MQECVDTLTEKSKAGNEMVSNLVQSLGSALVYPDAGNFDTNRKLWDNYAAEWEPDASWVQKMAQGSKTERLEVVGDEWSTRDDVMRVINDFILPNVTEESNVGEIGCGGGRVTVEVFRKAGQLTCFDISKNMLKRTRDAVGEGVCAGGGKVIFVLLSQPRLPENASDSLDFVILYDVLVHVDLHITNKYIREIARVLKPGGKAFLSTANFLSPGGWDRFNAQDKYSVGGFY 231
BLAST of mRNA_H-paniculata_contig114.897.1 vs. uniprot
Match: A0A7S2SUS9_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SUS9_9STRA) HSP 1 Score: 216 bits (551), Expect = 4.020e-63 Identity = 103/223 (46.19%), Postives = 145/223 (65.02%), Query Frame = 1 Query: 229 SKQGNEMVADLVQSLGSALVYPDAGNLETNRKLWDNYAAEWEPSAGWVQKMAGGSNADR---LEVVGDEWSTRDEVLRVINDFILPNVTEESTVGEIGCGGGRVTLEVFRQAGQLTCFDISKNMLKRTHEAVGEEPCAGGGKVKFVLLSEARLPENATNSLDFVILYDVLVHVDLHVTNKYVREIFRVLKPGGKAFLSTANFLSPGGWDRFIAQDKYTVGGFY 888 +++G+ MV +L++SL A+VYPDAGN +TNRKLWD YA EW+P+ W+Q+M+ A + +VGDEW+ + RV+ DFIL V V E+G GGGRV V G L C DIS MLKR + + + F+ L++ R P++ + FV ++DV VHVDLH+ ++Y+ EI+++L PGGKAF+STAN ++ GGW+RF Q KYTVGGFY Sbjct: 20 AQEGSPMVLELLKSLNQAVVYPDAGNFDTNRKLWDLYAGEWDPAQPWLQQMSRDVQASLEQDIHIVGDEWAPPTHLDRVVQDFILTEVDSSCQVLEVGSGGGRVAARVAPHVGHLKCADISMEMLKRCRDTLQAHT-----NISFLHLTQPRFPDHLHGTFHFVYVFDVFVHVDLHLIHQYLSEIYKLLVPGGKAFISTANLMTSGGWERFARQSKYTVGGFY 237
BLAST of mRNA_H-paniculata_contig114.897.1 vs. uniprot
Match: A0A835Z8T5_9STRA (Methyltransferase type 12 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z8T5_9STRA) HSP 1 Score: 208 bits (530), Expect = 5.610e-60 Identity = 113/265 (42.64%), Postives = 153/265 (57.74%), Query Frame = 1 Query: 196 MQECMDMLTEKSK-QGNEMVADLVQSLGSALVY-PDAGNLETNRKLWDNYAAEWEPSAGWVQKMAGGSNAD--------------------------------RLEVVGDEWSTRDEVLRVINDFILPNVTEESTVGEIGCGGGRVTLEVFRQAGQLTCFDISKNMLKRTHEAVGEEPCAGGGKVKFVLLSEARLPENATNSLDFVILYDVLVHVDLHVTNKYVREIFRVLKPGGKAFLSTANFLSPGGWDRFIAQDKYTVGGFY 888 M++ + L E+++ + M+A+L++SLG A+VY PDAGNL+TNRKLWD YA+EW A WVQ MA GS VG+EWST DE+++V+ +FILP + +S E+GCGGGRV ++V+ L C+DIS ML R A+ AG LL+ LP A +S DF+ +DVLVHVDLHV+ +Y+RE+ R L G+AFLS A+ S GW+RF Q K+TVGGFY Sbjct: 1 MEQAEEQLAERAQASASPMIANLIKSLGQAIVYYPDAGNLDTNRKLWDAYASEWSQDASWVQDMARGSRPGDGGPSATAAXXXXXXXXXXXXXXXXXXXXXXXXXXXVGEEWSTSDELMQVVREFILPYLNPDSRAAELGCGGGRVAVQVYPHVSNLDCYDISPQMLTRCAAAL---KAAGARNATLQLLTAPALPAAAADSYDFLYCFDVLVHVDLHVSWRYLREVRRCLTERGRAFLSFASVCSRLGWERFARQSKFTVGGFY 262
BLAST of mRNA_H-paniculata_contig114.897.1 vs. uniprot
Match: A0A7S2UUH0_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UUH0_9STRA) HSP 1 Score: 200 bits (508), Expect = 2.360e-57 Identity = 100/225 (44.44%), Postives = 133/225 (59.11%), Query Frame = 1 Query: 247 MVADLVQSLGSALVYPDAGNLETNRKLWDNYAAEWEPSAGWVQKMAGGSNA-----------DRLEVVGDEWSTRDEVLRVINDFILPNVTEESTVGEIGCGGGRVTLEVFRQAGQLTCFDISKNMLKRTHEAVGEEPCAGGGKVKFVLLSEARLPENATNSLDFVILYDVLVHVDLHVTNKYVREIFRVLKPGGKAFLSTANFLSPGGWDRFIAQDKYTVGGFY 888 M L+ SLGSALVYPD GN TN+KLW+ YA EW PS WV+ +A +N+ D L+ VG EWS ++ ++ F+ + E+ V EIGCGGGR+ +V + ++ C+DISK M+ + +A+ V F +L E +N DF+ +DV+VH+DLH+ NKY EI R LK GKAF+STAN S GGW RF Q KYTVGGFY Sbjct: 1 MAMSLINSLGSALVYPDQGNFVTNKKLWNLYAQEWSPSEDWVKDIARPNNSSQDIGSSSNEVDELKFVGQEWSPDTDLEEILQQFVYDYIDEDKLVAEIGCGGGRLAAKVAPRVKKMDCYDISKEMISQAEKALSFL-----SNVDFHILEEPSFSKNCEKLYDFIYCFDVMVHMDLHLINKYFGEIGRALKDDGKAFISTANITSTGGWARFSKQRKYTVGGFY 220
BLAST of mRNA_H-paniculata_contig114.897.1 vs. uniprot
Match: W7TSG7_9STRA (Deacetylase sulfotransferase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TSG7_9STRA) HSP 1 Score: 200 bits (509), Expect = 5.470e-56 Identity = 109/264 (41.29%), Postives = 147/264 (55.68%), Query Frame = 1 Query: 232 KQGNEMVADLVQSLGSALVYPDAGNLETNRKLWDNYAAEWE-------PSAG----------------WVQKMAGGS---------NADRLEVVGDEWSTRDEVLRVINDFILPNVTEESTVGEIGCGGGRVTLEVFRQAGQLTCFDISKNMLKRTHEAVGEEPCAGGGKVKFVLLSE----------ARLPENATNSLDFVILYDVLVHVDLHVTNKYVREIFRVLKPGGKAFLSTANFLSPGGWDRFIAQDKYTVGGFYWTT 897 ++G +V ++ SL A+VY D GN+ETNR+LW+ YA EW P +G WVQ+MA + + L ++G EWS+ +++ V+ DFILP +T ES V E+G GGGRV V + +LTC DIS+ ML+ A+ P AG ++F+L+ P + DFV +DVLVHVD+H +REI R+LK GKAFLSTAN LSP GW RF AQDKYTVGGFY+ + Sbjct: 63 REGTSIVRSVINSLSGAMVYTDVGNVETNRRLWNRYAEEWHGNCARNGPYSGSARSPSSELPANKPNVWVQQMAANTAKTSKSTPYSLPALALIGQEWSSPEDLEEVVRDFILPYLTPESAVVEVGVGGGRVAALVLGKCMRLTCLDISERMLEAARTALAAHPAAGATVLEFILVGNDSNPSLPSQRVEYPVSLHGRCDFVYCFDVLVHVDVHTLYHTLREIRRLLKASGKAFLSTANILSPAGWRRFAAQDKYTVGGFYFVS 326
BLAST of mRNA_H-paniculata_contig114.897.1 vs. uniprot
Match: A0A6G0WRC8_9STRA (Methyltransf_25 domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WRC8_9STRA) HSP 1 Score: 185 bits (469), Expect = 1.050e-51 Identity = 99/224 (44.20%), Postives = 143/224 (63.84%), Query Frame = 1 Query: 229 SKQGNEMVADLVQSLGSALVYPDAGNLETNRKLWDNYAAEWEPSAGWVQKMAGGSNADRLEVVGDEWSTRDEVLRVINDFILPNVT--EESTVGEIGCGGGRVTLEVFRQ--AGQLTCFDISKNMLKRTHEAVGEEPCAGGGKVKFVLLSEARLPENATNSLDFVILYDVLVHVDLHVTNKYVREIFRVLKPGGKAFLSTANFLSPGGWDRFIAQDKYTVGGFY 888 SK N+++ ++ SL SA+V PD GN+E NR++WD YA +W P+A +VQ M+ + L V+GDEWST +++ V++ ++ P + E VGEIG GGGRV+ V RQ + C DIS ML + + + P V+F L A A SLDFVI++DV+VH+DLH ++ +++I R+LKPGG FLSTAN L+P GW+RF Q K+++GGFY Sbjct: 3 SKARNDLILGVISSLSSAMVAPDIGNVEGNRRVWDAYAKDWSPTADFVQSMSP-QFSHPLAVLGDEWSTPEDLHAVLDAYVYPYLAAGESLHVGEIGSGGGRVSRIVARQPTVSKYVCMDISAEMLAHAKKTLEDVP-----HVEFKHLPRAW---PAATSLDFVIVFDVMVHMDLHTIHQTLQQIHRLLKPGGHCFLSTANLLAPKGWERFEKQSKFSIGGFY 217
BLAST of mRNA_H-paniculata_contig114.897.1 vs. uniprot
Match: A0A6A7GCB0_9CRUS (Methyltransferase type 12 (Fragment) n=1 Tax=Hirondellea gigas TaxID=1518452 RepID=A0A6A7GCB0_9CRUS) HSP 1 Score: 184 bits (467), Expect = 5.650e-51 Identity = 100/245 (40.82%), Postives = 145/245 (59.18%), Query Frame = 1 Query: 214 MLTEKSKQ-GNEMVADLVQSLGSALVYPDAGNLETNRKLWDNYAAEWEPSAGWVQKMAGGS-------NADR----LEVVGDEWSTRDEVLRVINDFILPNVTEESTVGEIGCGGGRVTLEVFRQAGQLTCFDISKNMLKRTHEAVGEEPCAGGGKVKFVLL-----SEARLPENATNSLDFVILYDVLVHVDLHVTNKYVREIFRVLKPGGKAFLSTANFLSPGGWDRFIAQDKYTVGGFYWTT 897 +++ +SK G + +L+++LG+++VY ++ N+ N+KLWD YA +W P+ WVQ+MA GS N D +E +GDEWS R L V++ FI+ N+ + +V EIG GGGRV V L CFD+S MLK + + + V+F LL S P T++ DFV L+DVLVHVD+H Y ++IF++LKP GKA + TAN +P GW RF Q K++V GFY+ T Sbjct: 15 LISSQSKHDGTSQIRNLLKNLGASVVYEES-NVVANKKLWDIYAKDWSPNKDWVQRMAHGSTESSSTPNIDGKKRGIECLGDEWSDRKSFLEVVDRFIVSNIKKSDSVLEIGSGGGRVASLVCPLVSSLHCFDVSSEMLKCAQKTLSKF-----NNVRFTLLESSTDSPPTFPIKLTSTFDFVYLFDVLVHVDIHTQFNYFQQIFQLLKPDGKALIHTANLCAPNGWKRFEKQKKFSVAGFYFVT 253
BLAST of mRNA_H-paniculata_contig114.897.1 vs. uniprot
Match: F0XX81_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0XX81_AURAN) HSP 1 Score: 182 bits (461), Expect = 3.520e-50 Identity = 99/235 (42.13%), Postives = 133/235 (56.60%), Query Frame = 1 Query: 238 GNEMVADLVQSLGSALVYPDAGNLETNRKLWDNYAAEWEPSAGWVQKMAGGSN--ADRLEVVGDEWSTRDEVLRVINDFILPNVTEESTVGEIGCGGGRVTLEVFRQAGQLTCFDISKNMLKRTHEAVGEEPCAGGGKVKFVLLSEARLPENA-------------TNSLDFVILYDVLVHVDLHVTNKYVREIFRVLKPGGKAFLSTANFLSPGGWDRFIAQDKYTVGGFYWTT 897 G EMV +VQSL SAL+YP+AGN+ TN KLWD YA+EW A WV +MA + A L+ VGDEW+ R RV++++IL VT E+ EIG GGGR+ V + L C D+S ML R A+ P A F L+ P +A DFV +DV+VH+D H + +R + +L GG+AF+STAN +P G+ RF Q KY+VGGF++ T Sbjct: 16 GQEMVQQMVQSLSSALIYPEAGNVATNEKLWDVYASEWGKEAPWVVEMAATNRDGAVALDAVGDEWAPRAHTERVVDEWILSEVTPEARCCEIGSGGGRIAALVAPRVASLACCDVSAKMLARAEAALAGGPAA----TSFHLVHGDAAPSDAGFGAGPRAYPPTMARGFDFVYCFDVMVHLDAHAMYRCLRRVESLLADGGRAFVSTANLKAPDGFARFEKQSKYSVGGFFFVT 246
BLAST of mRNA_H-paniculata_contig114.897.1 vs. uniprot
Match: A0A024U9T0_9STRA (Methyltransf_12 domain-containing protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024U9T0_9STRA) HSP 1 Score: 180 bits (456), Expect = 1.280e-49 Identity = 96/225 (42.67%), Postives = 139/225 (61.78%), Query Frame = 1 Query: 229 SKQGNEMVADLVQSLGSALVYPDAGNLETNRKLWDNYAAEWEPSAGWVQKMAGGSNADRLEVVGDEWSTRDEVLRVINDFILPNVTEEST---VGEIGCGGGRVTLEV--FRQAGQLTCFDISKNMLKRTHEAVGEEPCAGGGKVKFVLLSEARLPENATNSLDFVILYDVLVHVDLHVTNKYVREIFRVLKPGGKAFLSTANFLSPGGWDRFIAQDKYTVGGFY 888 S+ N +V D++ SL SA+V PD GN+E NR++WD YA +W PSA +V M+ LEV+GDEWS+ +++ V+ +F+ P + VGEIG GGGRV+ + + + TC DIS ML+R + + V F L A P +T LDFV+++DV+VH+DLH + +++ FR+LKPGG F+STAN ++ GW RF AQ K+T+GGFY Sbjct: 2 SRTRNALVLDVISSLSSAMVAPDVGNIEGNRRVWDAYAKDWSPSADYVVSMSP-QLTHPLEVLGDEWSSPEDLDEVLLEFVYPFMALSPALLHVGEIGSGGGRVSRRIAAHKSVQKFTCLDISTEMLQRAQKTLAHAGLLTEKVVDFRHLPSA-WPSPST--LDFVVIFDVMVHMDLHTIYQTLQQTFRLLKPGGYCFMSTANLVASEGWKRFQAQSKFTIGGFY 222
BLAST of mRNA_H-paniculata_contig114.897.1 vs. uniprot
Match: A0A485L136_9STRA (Aste57867_14601 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485L136_9STRA) HSP 1 Score: 179 bits (453), Expect = 3.520e-49 Identity = 91/226 (40.27%), Postives = 142/226 (62.83%), Query Frame = 1 Query: 229 SKQGNEMVADLVQSLGSALVYPDAGNLETNRKLWDNYAAEWEPSAGWVQKMAGGSNADRLEVVGDEWSTRDEVLRVINDFILPNVTEESTV--GEIGCGGGRVTLEVFRQ--AGQLTCFDISKNMLKRTHEAVGEEPCAGGGKVKFVLLSEARLPENATNSLDFVILYDVLVHVDLHVTNKYVREIFRVLKPGGKAFLSTANFLSPGGWDRFIAQDKYTVGGFYWT 894 +K +++ D++ SL SA+V PD GN+E NR++WD YA +W P+A +V M+ + L+V+GDEWST ++ V++ F+ P +++ + V GEIG GGGRV V + C DIS ML+ + + P + + LL + P+ +SLDFVI++DV+VH+DLH + ++++FR+L+PGG F STAN +P GW RF Q K+++GGFY+T Sbjct: 2 AKARKDLILDVISSLSSAMVAPDIGNIEGNRRVWDAYAKDWSPTADFVTSMSP-QFSHPLDVLGDEWSTPADLTHVLSTFVFPYLSQSTQVHVGEIGSGGGRVARLVASHPAVSRYVCMDISSEMLEHARKTLASVP-----HIDYCLLPQTS-PD--ASSLDFVIVFDVMVHMDLHTIYQTLQQVFRLLRPGGHCFFSTANLTAPDGWARFQKQAKFSIGGFYFT 218 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig114.897.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig114.897.1 >prot_H-paniculata_contig114.897.1 ID=prot_H-paniculata_contig114.897.1|Name=mRNA_H-paniculata_contig114.897.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=314bp MSVDKLSTTTRTPLQSPPAGPMGRSSEEAARVEAMQECMDMLTEKSKQGNback to top mRNA from alignment at H-paniculata_contig114:14111..25262- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig114.897.1 ID=mRNA_H-paniculata_contig114.897.1|Name=mRNA_H-paniculata_contig114.897.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=11152bp|location=Sequence derived from alignment at H-paniculata_contig114:14111..25262- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig114:14111..25262- >mRNA_H-paniculata_contig114.897.1 ID=mRNA_H-paniculata_contig114.897.1|Name=mRNA_H-paniculata_contig114.897.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1884bp|location=Sequence derived from alignment at H-paniculata_contig114:14111..25262- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |