mRNA_H-paniculata_contig3339.8948.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig3339.8948.1
Unique NamemRNA_H-paniculata_contig3339.8948.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
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BLAST of mRNA_H-paniculata_contig3339.8948.1 vs. uniprot
Match: D8LGB2_ECTSI (Peroxisomal membrane protein-related n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGB2_ECTSI)

HSP 1 Score: 349 bits (895), Expect = 1.140e-115
Identity = 168/203 (82.76%), Postives = 186/203 (91.63%), Query Frame = 3 
Query:  162 MSGIWAAYNKALASNPLVVKALTSLTGFTVGDILAQKFINPDDEYDIMRTVRLGSFGALVHGPTGHWFYGMLDSKMPGTAPMTVVSKVAIDQTIWNPIFGLMFFSYLGLAEGKSTDEIVTKIKNDLQTAVMGSWAVWVPAHTINFKFVPTSQRLLYINTIQIGYNIFLSFLGNKKAPEEDVKSALVASD-GKIERLAEDIKED 767
            MSGIWAAYNKALA+ PL+VKA+TS TGFTVGDILAQKFI+P+D+YD MRT+RLG+FGALVHGPTGH+FYGMLD+K+PGT PMTV SKVAIDQTIWNPIFG+MFF+YLGLAEGKS D+I  KIKNDL TAVMGSW VW+PAHTINFKFVPTSQRLLYINTIQIGYNIFLSFLGNKKA ++ VKSALV +D G IER AED KED
Sbjct:    1 MSGIWAAYNKALAAQPLLVKAMTSFTGFTVGDILAQKFISPEDDYDFMRTLRLGTFGALVHGPTGHYFYGMLDAKLPGTKPMTVASKVAIDQTIWNPIFGVMFFTYLGLAEGKSVDDIQKKIKNDLATAVMGSWTVWIPAHTINFKFVPTSQRLLYINTIQIGYNIFLSFLGNKKADDDSVKSALVPADAGNIERFAEDAKED 203
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BLAST of mRNA_H-paniculata_contig3339.8948.1 vs. uniprot
Match: A0A835Z5E2_9STRA (Peroxisomal membrane protein-related n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z5E2_9STRA)

HSP 1 Score: 327 bits (838), Expect = 2.520e-107
Identity = 154/181 (85.08%), Postives = 166/181 (91.71%), Query Frame = 3 
Query:  162 MSGIWAAYNKALASNPLVVKALTSLTGFTVGDILAQKFINPDDEYDIMRTVRLGSFGALVHGPTGHWFYGMLDSKMPGTAPMTVVSKVAIDQTIWNPIFGLMFFSYLGLAEGKSTDEIVTKIKNDLQTAVMGSWAVWVPAHTINFKFVPTSQRLLYINTIQIGYNIFLSFLGNKKAPEEDV 704
            M+GIWAAYN+AL + PL+VKA TSLTGFTVGDILAQKFIN D EYD MRTVRLGSFGALVHGPTGHWFYGMLDSK+PGTAPMTV +KVAIDQTIWNPIFG+MFFSYLGL EGKS D+I  KIK DL TAVMGSW VW+PAHTINFKFVPTSQRLLYIN+IQIGYN+FLSFLGNKKAPE+ V
Sbjct:    1 MAGIWAAYNRALTAQPLLVKACTSLTGFTVGDILAQKFINKDAEYDFMRTVRLGSFGALVHGPTGHWFYGMLDSKLPGTAPMTVATKVAIDQTIWNPIFGIMFFSYLGLTEGKSVDQIYQKIKADLATAVMGSWTVWIPAHTINFKFVPTSQRLLYINSIQIGYNVFLSFLGNKKAPEDAV 181
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BLAST of mRNA_H-paniculata_contig3339.8948.1 vs. uniprot
Match: A0A6S8ZBW9_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6S8ZBW9_9STRA)

HSP 1 Score: 290 bits (743), Expect = 4.740e-93
Identity = 136/183 (74.32%), Postives = 156/183 (85.25%), Query Frame = 3 
Query:  162 MSGIWAAYNKALASNPLVVKALTSLTGFTVGDILAQKFINPD-DEYDIMRTVRLGSFGALVHGPTGHWFYGMLDSKMPGTAPMTVVSKVAIDQTIWNPIFGLMFFSYLGLAEGKSTDEIVTKIKNDLQTAVMGSWAVWVPAHTINFKFVPTSQRLLYINTIQIGYNIFLSFLGNKKAPEEDVK 707
            MSGIWA YNK L + PL+ KALTSLTGFT+GDILAQKF+N D + YD+MRT+RLGSFG L+HG TGH+FYGMLDSKMPGT P+TV +KVAIDQTIWNPIFG MFF YL + EGK+  +   K+K+DL+TAVMGSWAVWVPAHTINF F+P SQRLLYIN+IQIGYN+FLSFLGNKK  EE  K
Sbjct:    1 MSGIWARYNKMLDAQPLLTKALTSLTGFTIGDILAQKFVNEDGNPYDVMRTIRLGSFGFLIHGTTGHYFYGMLDSKMPGTKPITVATKVAIDQTIWNPIFGCMFFGYLNVMEGKTFQDYTNKLKSDLKTAVMGSWAVWVPAHTINFAFIPPSQRLLYINSIQIGYNVFLSFLGNKKVEEEPKK 183
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BLAST of mRNA_H-paniculata_contig3339.8948.1 vs. uniprot
Match: A0A6S9LPN5_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6S9LPN5_HETAK)

HSP 1 Score: 288 bits (737), Expect = 3.530e-92
Identity = 134/182 (73.63%), Postives = 153/182 (84.07%), Query Frame = 3 
Query:  162 MSGIWAAYNKALASNPLVVKALTSLTGFTVGDILAQKFINPDDEYDIMRTVRLGSFGALVHGPTGHWFYGMLDSKMPGTAPMTVVSKVAIDQTIWNPIFGLMFFSYLGLAEGKSTDEIVTKIKNDLQTAVMGSWAVWVPAHTINFKFVPTSQRLLYINTIQIGYNIFLSFLGNKKAPEEDVK 707
            MSG+WA YN  L + PL  KALTSLTGFT+GDILAQKFINP+D+YD+ RTVR+G+FG L HGPTGH+FYG LD K+PGTA  TV +KVAIDQ IWNPIFG+ FFS+LG AEGKS  EIV KIKNDL TAV GSW VWVPAH INF+F+P+SQRLLYIN+IQIGYN+FLSFLGNKK   E+ K
Sbjct:    1 MSGLWAKYNAFLEAQPLACKALTSLTGFTIGDILAQKFINPEDDYDVARTVRMGAFGMLFHGPTGHYFYGFLDGKLPGTATTTVATKVAIDQLIWNPIFGVCFFSFLGAAEGKSGGEIVDKIKNDLMTAVTGSWTVWVPAHIINFRFIPSSQRLLYINSIQIGYNMFLSFLGNKKVDGEEEK 182
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BLAST of mRNA_H-paniculata_contig3339.8948.1 vs. uniprot
Match: A0A1Z5JSB9_FISSO (Uncharacterized protein n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JSB9_FISSO)

HSP 1 Score: 287 bits (735), Expect = 6.150e-92
Identity = 134/176 (76.14%), Postives = 152/176 (86.36%), Query Frame = 3 
Query:  162 MSGIWAAYNKALASNPLVVKALTSLTGFTVGDILAQKFINPDDE-YDIMRTVRLGSFGALVHGPTGHWFYGMLDSKMPGTAPMTVVSKVAIDQTIWNPIFGLMFFSYLGLAEGKSTDEIVTKIKNDLQTAVMGSWAVWVPAHTINFKFVPTSQRLLYINTIQIGYNIFLSFLGNKK 686
            MSG+WA YNK L + PL+ KALTSLTGFT+GD+LAQKF+ P D+ YD+MRTVRLGSFG L+HG TGH+FYG LD K+PGTAPMTV +KVAIDQTIWNPIFGLMFF YL   EGKS ++   KIK DL+TAVMGSWAVWVPAHTINF F+P SQRLLYIN+IQIGYN+FLSFLGNKK
Sbjct:    1 MSGLWARYNKMLDAQPLLTKALTSLTGFTLGDVLAQKFVEPTDKPYDLMRTVRLGSFGFLIHGTTGHYFYGFLDGKLPGTAPMTVATKVAIDQTIWNPIFGLMFFGYLNFVEGKSFEDYTNKIKADLKTAVMGSWAVWVPAHTINFAFIPPSQRLLYINSIQIGYNVFLSFLGNKK 176
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BLAST of mRNA_H-paniculata_contig3339.8948.1 vs. uniprot
Match: A0A7S2V4A9_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V4A9_9STRA)

HSP 1 Score: 284 bits (727), Expect = 1.200e-90
Identity = 133/182 (73.08%), Postives = 155/182 (85.16%), Query Frame = 3 
Query:  162 MSGIWAAYNKALASNPLVVKALTSLTGFTVGDILAQKFINPDDEYDIMRTVRLGSFGALVHGPTGHWFYGMLDSKMPGTAPMTVVSKVAIDQTIWNPIFGLMFFSYLGLAEGKSTDEIVTKIKNDLQTAVMGSWAVWVPAHTINFKFVPTSQRLLYINTIQIGYNIFLSFLGNKKAPEEDVK 707
            M+ +WA YN+ L + P++ KALTSLTGFT+GDILAQKFINP+ +YD+MRT+RLGSFG L HGP+GH+FYG LDSK+ GT+   V +KVAIDQ  WNPIFG +FF+YLGLAEGKS  EIV KIK+DL+TAVMGSW VWVPAH INFKFVP+SQRLLYINTIQIGYNIFLSFLGNK A E + K
Sbjct:    1 MAKLWAKYNQFLDAQPILCKALTSLTGFTIGDILAQKFINPEADYDVMRTIRLGSFGLLFHGPSGHYFYGFLDSKIVGTSTQAVATKVAIDQLFWNPIFGTVFFTYLGLAEGKSGGEIVNKIKSDLKTAVMGSWTVWVPAHIINFKFVPSSQRLLYINTIQIGYNIFLSFLGNKSADEPEKK 182
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BLAST of mRNA_H-paniculata_contig3339.8948.1 vs. uniprot
Match: A0A448YW01_9STRA (Uncharacterized protein n=2 Tax=Pseudo-nitzschia TaxID=41953 RepID=A0A448YW01_9STRA)

HSP 1 Score: 284 bits (726), Expect = 1.430e-90
Identity = 136/179 (75.98%), Postives = 150/179 (83.80%), Query Frame = 3 
Query:  162 MSGIWAAYNKALASNPLVVKALTSLTGFTVGDILAQKFINPDDE-YDIMRTVRLGSFGALVHGPTGHWFYGMLDSKMPGTAPMTVVSKVAIDQTIWNPIFGLMFFSYLGLAEGKSTDEIVTKIKNDLQTAVMGSWAVWVPAHTINFKFVPTSQRLLYINTIQIGYNIFLSFLGNKKAPE 695
            M+ IWA YNK L + PL+ K LTSLTGFTVGDILAQKFI P D+ YDIMRT+RLGSFG L HG TGH+FYGMLDSKMPGT P+TV SKV IDQTIWNPIFG  FF +L  AEGK+ D+   K+ +DL+TAVMGSWAVWVPAHTINF F+P SQRLLYINTIQIGYNIFLSFLGNKKA E
Sbjct:    1 MASIWARYNKLLDTQPLLTKCLTSLTGFTVGDILAQKFIEPSDKPYDIMRTIRLGSFGFLFHGSTGHYFYGMLDSKMPGTKPVTVASKVLIDQTIWNPIFGCCFFGFLNFAEGKTWDDYTKKLNSDLKTAVMGSWAVWVPAHTINFAFIPPSQRLLYINTIQIGYNIFLSFLGNKKADE 179
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BLAST of mRNA_H-paniculata_contig3339.8948.1 vs. uniprot
Match: W7TJ93_9STRA (Mpv17-like protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TJ93_9STRA)

HSP 1 Score: 282 bits (722), Expect = 8.320e-90
Identity = 133/184 (72.28%), Postives = 159/184 (86.41%), Query Frame = 3 
Query:  171 IWAAYNKALASNPLVVKALTSLTGFTVGDILAQKFINPDDE--YDIMRTVRLGSFGALVHGPTGHWFYGMLDSKMPGTAPMTVVSKVAIDQTIWNPIFGLMFFSYLGLAEGKSTDEIVTKIKNDLQTAVMGSWAVWVPAHTINFKFVPTSQRLLYINTIQIGYNIFLSFLGNKKAPE-EDVKSA 713
            +W+ YN AL  NPL++KALTSLTGFT+GD+LAQKF+ PD+E  YD+MRTVRLGSFG LVHGPTGH+FYG LD ++PGTA  TV +KVAIDQ +WNP FG+MFFSYLGLAEGKS  +I  KIKNDL TAV+GSW VW+PAH INF+FVP++QRLLYIN+IQIGYNIFLSFLGNKK  + E++K+A
Sbjct:    5 LWSQYNVALEKNPLLIKALTSLTGFTIGDVLAQKFVTPDEEKGYDLMRTVRLGSFGFLVHGPTGHFFYGWLDKQIPGTAMKTVATKVAIDQLLWNPCFGVMFFSYLGLAEGKSFTDIQAKIKNDLATAVVGSWTVWIPAHFINFRFVPSNQRLLYINSIQIGYNIFLSFLGNKKVDDTEELKAA 188
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BLAST of mRNA_H-paniculata_contig3339.8948.1 vs. uniprot
Match: B7G8P1_PHATC (Predicted protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7G8P1_PHATC)

HSP 1 Score: 282 bits (721), Expect = 9.910e-90
Identity = 136/183 (74.32%), Postives = 151/183 (82.51%), Query Frame = 3 
Query:  162 MSGIWAAYNKALASNPLVVKALTSLTGFTVGDILAQKFINPDDE-YDIMRTVRLGSFGALVHGPTGHWFYGMLDSKMPGTAPMTVVSKVAIDQTIWNPIFGLMFFSYLGLAEGKSTDEIVTKIKNDLQTAVMGSWAVWVPAHTINFKFVPTSQRLLYINTIQIGYNIFLSFLGNKKAPEEDVK 707
            MSG+WA YN  L + PL+ KALTS+TGF++GDILAQ FI   D+ YD MRT R+GSFG L+HG TGH+FYG LDSK+PGTAPMTV SKVAIDQTIWNPIFG MFF YL L EGKS D+  TKIK DL+TAVMGSWAVWVPAHTINF FVP +QRLLYINTIQIGYN+FLSFLGNK   EE  K
Sbjct:    1 MSGLWARYNSMLDAQPLLTKALTSMTGFSLGDILAQCFIEEGDKGYDPMRTFRMGSFGFLLHGTTGHYFYGFLDSKLPGTAPMTVASKVAIDQTIWNPIFGCMFFGYLNLMEGKSLDDYTTKIKTDLKTAVMGSWAVWVPAHTINFAFVPPAQRLLYINTIQIGYNVFLSFLGNKSVEEEPKK 183
[Close]
BLAST of mRNA_H-paniculata_contig3339.8948.1 vs. uniprot
Match: Q0IHG9_XENLA (MGC154358 protein n=1 Tax=Xenopus laevis TaxID=8355 RepID=Q0IHG9_XENLA)

HSP 1 Score: 281 bits (719), Expect = 3.310e-89
Identity = 136/195 (69.74%), Postives = 161/195 (82.56%), Query Frame = 3 
Query:  171 IWAAYNKALASNPLVVKALTSLTGFTVGDILAQKFINPDDE--YDIMRTVRLGSFGALVHGPTGHWFYGMLDSKMPGTAPMTVVSKVAIDQTIWNPIFGLMFFSYLGLAEGKSTDEIVTKIKNDLQTAVMGSWAVWVPAHTINFKFVPTSQRLLYINTIQIGYNIFLSFLGNKKAPE-EDVKSALVASDGKIERL 746
            +W  YN AL +NPL++KA+TSLTGFT+GDILAQKF+ PD E  YD+MRTVRLGSFG LVHGPTGH+FY  LD ++PGTA  TV +KVAIDQ +WNP FG+MFFSYLGLAEGKS  +I TKIKNDL TAV+GSW VW+PAH +NF+FVP+SQRLLYIN+IQIGYNIFLSFLGNKK  E E VK A  A    ++++
Sbjct:    5 LWTKYNAALETNPLLIKAVTSLTGFTLGDILAQKFVMPDKEKGYDLMRTVRLGSFGFLVHGPTGHYFYSWLDKQIPGTAMKTVATKVAIDQLLWNPCFGVMFFSYLGLAEGKSFADIQTKIKNDLTTAVVGSWTVWIPAHFVNFRFVPSSQRLLYINSIQIGYNIFLSFLGNKKVDEPEVVKEAEAAVTSAVDKM 199
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig3339.8948.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LGB2_ECTSI1.140e-11582.76Peroxisomal membrane protein-related n=1 Tax=Ectoc... [more]
A0A835Z5E2_9STRA2.520e-10785.08Peroxisomal membrane protein-related n=1 Tax=Tribo... [more]
A0A6S8ZBW9_9STRA4.740e-9374.32Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]
A0A6S9LPN5_HETAK3.530e-9273.63Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A1Z5JSB9_FISSO6.150e-9276.14Uncharacterized protein n=1 Tax=Fistulifera solari... [more]
A0A7S2V4A9_9STRA1.200e-9073.08Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A448YW01_9STRA1.430e-9075.98Uncharacterized protein n=2 Tax=Pseudo-nitzschia T... [more]
W7TJ93_9STRA8.320e-9072.28Mpv17-like protein n=2 Tax=Monodopsidaceae TaxID=4... [more]
B7G8P1_PHATC9.910e-9074.32Predicted protein n=2 Tax=Phaeodactylum tricornutu... [more]
Q0IHG9_XENLA3.310e-8969.74MGC154358 protein n=1 Tax=Xenopus laevis TaxID=835... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig3339contigH-paniculata_contig3339:1282..6599 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score355.1
Seed ortholog evalue2.5e-95
Seed eggNOG ortholog2880.D8LGB2
KEGG koko:K13348
KEGG Pathwayko04146,map04146
Hectar predicted targeting categoryother localisation
EggNOG free text desc.Belongs to the peroxisomal membrane protein PXMP2 4 family
EggNOG OGsKOG1944@1,KOG1944@2759
Ec32 ortholog descriptionperoxisomal membrane protein-related
Ec32 orthologEc-06_002720.1
COG Functional cat.C
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001
Exons4
Model size1584
Cds size732
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig3339.8948.1prot_H-paniculata_contig3339.8948.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig3339 1973..6438 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930031.54612-UTR-H-paniculata_contig3339:1281..19721622930031.54612-UTR-H-paniculata_contig3339:1281..1972Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig3339 1282..1972 -
1691481117.9926763-UTR-H-paniculata_contig3339:1281..19721691481117.9926763-UTR-H-paniculata_contig3339:1281..1972Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig3339 1282..1972 -
1622930031.640258-UTR-H-paniculata_contig3339:6438..65991622930031.640258-UTR-H-paniculata_contig3339:6438..6599Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig3339 6439..6599 -
1691481118.0410228-UTR-H-paniculata_contig3339:6438..65991691481118.0410228-UTR-H-paniculata_contig3339:6438..6599Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig3339 6439..6599 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930031.5683205-CDS-H-paniculata_contig3339:1972..22211622930031.5683205-CDS-H-paniculata_contig3339:1972..2221Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig3339 1973..2221 -
1691481118.0037127-CDS-H-paniculata_contig3339:1972..22211691481118.0037127-CDS-H-paniculata_contig3339:1972..2221Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig3339 1973..2221 -
1622930031.5940058-CDS-H-paniculata_contig3339:2614..28211622930031.5940058-CDS-H-paniculata_contig3339:2614..2821Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig3339 2615..2821 -
1691481118.0127227-CDS-H-paniculata_contig3339:2614..28211691481118.0127227-CDS-H-paniculata_contig3339:2614..2821Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig3339 2615..2821 -
1622930031.6096008-CDS-H-paniculata_contig3339:3619..37351622930031.6096008-CDS-H-paniculata_contig3339:3619..3735Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig3339 3620..3735 -
1691481118.0220387-CDS-H-paniculata_contig3339:3619..37351691481118.0220387-CDS-H-paniculata_contig3339:3619..3735Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig3339 3620..3735 -
1622930031.6234279-CDS-H-paniculata_contig3339:6278..64381622930031.6234279-CDS-H-paniculata_contig3339:6278..6438Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig3339 6279..6438 -
1691481118.0314674-CDS-H-paniculata_contig3339:6278..64381691481118.0314674-CDS-H-paniculata_contig3339:6278..6438Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig3339 6279..6438 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig3339.8948.1

>prot_H-paniculata_contig3339.8948.1 ID=prot_H-paniculata_contig3339.8948.1|Name=mRNA_H-paniculata_contig3339.8948.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=244bp
MSGIWAAYNKALASNPLVVKALTSLTGFTVGDILAQKFINPDDEYDIMRT
VRLGSFGALVHGPTGHWFYGMLDSKMPGTAPMTVVSKVAIDQTIWNPIFG
LMFFSYLGLAEGKSTDEIVTKIKNDLQTAVMGSWAVWVPAHTINFKFVPT
SQRLLYINTIQIGYNIFLSFLGNKKAPEEDVKSALVASDGKIERLAEDIK
EDSKYGSSQVHLFPPLYSCFISPTLTPVCASFFFMSKERTSFV*
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mRNA from alignment at H-paniculata_contig3339:1282..6599-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig3339.8948.1 ID=mRNA_H-paniculata_contig3339.8948.1|Name=mRNA_H-paniculata_contig3339.8948.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=5318bp|location=Sequence derived from alignment at H-paniculata_contig3339:1282..6599- (Halopteris paniculata Hal_grac_a_UBK monoicous)
CTGAAAATGTGAAATGATTTCTACCCTAATCAATATTTGTTACGCGTAGA
AATTGTCATCATTATCCTGACCACACAAAGGCGGCCACAGGCGACCGAGC
AAGTACACGTAGATACTCTTCCCACGCCGTACCTTATCCACAGCATTCCT
GTACTGTAGTCATGTCTGGGATATGGGCGGCGTACAACAAGGCTCTGGCG
AGCAACCCACTTGTGGTCAAGGCCCTCACCTCCCTCACCGGCTTCACTGT
GGGCGACATTCTGGCACAAAAGTTCATCAACCCGGATGACGAATATGACA
TAATGCGAACTGTGCGTCTAGGTGGGTTGTGTTCCACCTGATTTGTTCCA
CGTGATGGAGGACAGCCTCGCATGTAAAGCAAATGAACGGCCTACTTCGA
GATTACTAGGTAGACATATAGAGGAAGACATGAGTTTTCACATGCATCGT
GGTTTTAGCTCCACCGAAAGCAATGCGTGGCCTCGAATTGCCCTTTCTGG
TTTGAGTTCTGGTTGAAAACAGGGAAAGAGCGGCCTCTTTTTGGTGTCTC
CACAAGAAATGATTCACGTCACACACCCTTACACACATACGTCCGACTCT
CTCTTTGGCGTCCAGTGTCGGTTTTCAGTGTCCAGTTTTCAGTGCAGTCA
ACTGTTTAGCAGAGCAGCTGTAAACACCTGCGACAGCGCACGTACGTGAT
GTACACAGCGATCTTATGCCTATGGCTCTTCTCGTCATTTCGGCGGTCTC
TAGCGTTTATGGCTGCAGACCAGCTGAGGTCAGATGTTGTATTTGTACAA
ATCGATGAGAAAAACGTGCAGGTCAAAATGATGCTCCTCTCTCACACAAT
ATAGGGTAGAGGTGTTTTTTTTCTCAAGTGAGTTTTGGTGCAACTACAAT
TATCTATTTTGTTGGTACGTATAAAGGAAAGGTAGAAACACGGAAAGCAC
TCCTTGTACTATAGTCGTGAGCGAGCTTGCACGCCATTGATGTCTGCGAA
CTCTTATGAAACACGTGCAAATATATCATCGGCTGTGTGCTTGGCTAATC
ACTCCGCTCGTTGGTTAGTGAAGTCTTGAAAAGTAGCCGTTTTTGGTGTT
GTTTTTATATATATCACCGTCGTTTGAAAATTGTGTTCGTACGCGTCGAG
TACTGGGAACCCTCTGCATACTCTTACGCTGCTGCGCCAGGCTACCCATG
TCAACGGTTGAGGTCGCGTCCTCATCAAAATACGTGCGATGGCATTTTCA
GTGCCTTGAAAATGTAGCCGGTATAAATATCTCAAGTGTCAATTTTAGAA
GATTGAAAGGTTTCAGACCGTGACGTTTAGCTTGTTCTGGTATGTGGAAC
CCGCAAGTGTGTACCTGGATTTACTTTGTGAATGTAGTAGGATGATGTGC
GTTCGATCGATGGCGTCCGTACCAGTTACTAATACTTGAGAGTGATGTTA
TGGTGCATCAGACCTGATGACCGTACATTTTAGAACTTGAGAGAATGGTA
TCTGCCCATGTGGTGGGTTTGGTGTGGACTCGTAACTTACAGCCTTGGAA
TACAATTTGGTAGCACTAAAGTGCAGCGCAAAAGTATGATGATACATATC
TCGTATTTCGCTGGACAGGTTGGCCGTCGTTGCCCCATATCCCATCGTCC
GCTGGAAACCCCCAAAATTACTGTTGAAAGAAAACACGTCGTTTTTGCCT
TTTCGCGAGATTTCTCGTCTTGATGGGATTGTCATTTTGCGATCACTTGT
TGAAACGTTCTTGTGCTTTTTTGCGGCGAAAAATTATTTGGCGGTCTGCT
CATGTCTTTTGTAAAAAGAATCCAGTGAACTGCGATTGCATCTAGTAGGC
CACGAGTTCAGTTTCACAAGCGTACGTGATGTGTTCAACGTCGGACTCGG
TCTCATGTCCCGACGTTCTGCAATGTGCAAATAAACGGCACGTGTTTGAG
TATGGACACTTTATTGTACTAAATGGTGAGTGAGCGGTCGAACCACCACA
AGTCTTACAGGGTCTGGATCGAGATGGTCGATACCATCACATCGCATTTA
ATCCCGCGAAACGGAGCGAACCAGTCCGTGGGTCGTCGTACACTCTTGTT
CCAATTTTACTTCGGCACATAGTCGTGAATCTGTGTTTTATACGACACCA
TGACCTGGTTGTGTTGAGTAAACTATGATCTGCATGGATATTTGCCCACT
GTGACAGATTACCTCAACGTAGAACATGGTCCTAATCAGAGAGAAGCGAT
TCACCACCTGTTGTCCATAGCGATTATTACACGGATGGTTTGCTGTCTGT
TATTTTAGACCAAAGATCGCTAATGAAGCCTGAGGACCGCACTTAGTAGT
GGAGACGAAGCTTCCCTTGTAACCGCGGGTCTCAGTTGTTGGGCGATCGT
CTTGATGAACGAAAAAGGAAGAATTTCTGAACGCAGATGCAAGCTTGGAA
TTTACGAAGATGCCCACAACGCTCTACCGTAGTGTGCGGGCCCGAGGTTC
GGCCATGCCATTTAGTACCACAAGCTTTGAAGGATTACCATCCCCTTCTC
CCAAAGTTTTTGTTCCCTGAACACTAGTATCCTAAAAAAATGGACTTAGG
AAGTATATGTCCCTTCTCTTCGGCAAATGGATCAATGCTCTGAGATAATA
AGGAAGAGTTGCTGAAACGAAGTCGAAATAACACGTTTTTTCACTCAGCA
CACCTGATAAATTTTCTCCTTCTTCGTTTTCGTTACAAAAGCTAAAATGA
AGTGTGCTCGACATAATTCCAATGCCCGTGAGACATGAAAGGGTCTAACT
AACGATTATATTATGCACTCCCCCAAAAATACGGACACCACGCCTTTTAC
CCGTGGTCCAACAGGGTCGTTTGGTGCCCTTGTGCACGGTCCCACCGGCC
ACTGGTTCTACGGCATGCTTGACAGCAAGATGCCTGGAACTGCACCCATG
ACCGTCGTGTCGAAGGTGGCGATAGACCAGGTATGTTTCCCGGAGAATAG
GCCCCTTTTCGCTATTTCAAGATCTGATCGGTGTGTAGTGTTTGAAATTT
ACGGAGTTGCTGTCGGTATTTTGTGGCACATTTCTTCGAAACCCCTGAAA
TGGCGTATGAAACGAGTAGTGTTGAAAAGAACATGGTTCTAAAAGTATCA
CGAGTAAGCTACTCCGCTTAGAGACTACGTCGGAATTAGTATTTTTGAAG
TTTTGAGTGCCTCCGTCTTGTTATACCTACATCACCCTCGTGATGAGTTA
TATTCCTTATGACATCGAGAAAATTGGTGTGCAAAGGTCGCCCCCGGTGA
AAGTAATTTTGTTTATATTGGCACCTTTAGAACCTGGGAATTTGCTTACC
AGTGCATGTGGCTCGCGATGGTGAAACAGCCAACGTAAGTAAACTATGAC
TTGTAGGGATCTGATTTGGTCAGATGCATCTAATCTGGTATACCGAGGTT
GGGTCCACCCCGACACTCCAAACAAGAATGACAGTGACGTCGATGGAGAC
TGCAATTCCAAGAGATGTATGTGTAGTATCATGTAGTGTATGTGTCCCGA
CAGGAAAGGGATGGAGGAAGTGCTCTGAGTACCTTGAATATACAGTAGTG
TCATGACAAGCACGGACTTGTCAAAACTTTGAATGCCATGTACTGATCCG
ATGTATGACGAAAGATAATCGCTTTGTAGTTCGTAAATTCGATATCTAGG
TGGGCCACGAACGCTCAAGTCCTTCCGTACCTTCCGTCAACTCTTTTGCC
GTCGTGAATAACGACCTGGGCGCGACAGACTATCTGGAACCCCATATTCG
GACTCATGTTCTTCTCGTACCTGGGCTTGGCCGAGGGCAAGTCTACGGAT
GAAATAGTGACGAAGATCAAGAATGACCTCCAGACAGCGGTCATGGGATC
CTGGGCGGTGTGGGTGCCAGCTCACACGATCAACTTCAAGTTTGTGCCTA
CCTCTCAGCGGCTGCTATACATCAACACCATCCAGGTAAAAGAGGGAGAG
AGTCGAAGCGGGGGATTATCTCCACTACCCACCCTTGTCCAACACGGCTC
CTTTCCCCGTGGTCGTTTATTTCATAAGCATCGGCCTTTTTGGGGGGTAG
AGTGATTGGATTAAATATTAGCCCTGAGGTGCGTATGTCCGTGTTTTCAT
GCTCCGTGTACTGTTTTTCTTTACTTCAAATGACTATTCCCCGAAACCTT
CAAGAGGAATTCCCCTAGTATTGTGGTATCCACCTGAACATATACCCGAC
TTACGGGGTGAGAGTTATCATGTTCCCGCCTAGCATCAGCTATTTTGGCT
TGAATCGCAACATTTGGCCCCACCCCCCTTGTCAATGTTGTTTCTTGTCC
TCTCTGCCTTTGCCATTGCCACATGTAGATTGGGTACAACATATTCCTGT
CGTTCTTGGGGAACAAGAAGGCGCCTGAGGAGGACGTGAAGTCCGCACTA
GTAGCATCAGACGGAAAAATTGAGCGGCTCGCTGAGGACATCAAGGAGGA
CAGCAAGTACGGTTCCTCCCAGGTCCACCTTTTTCCGCCATTATATTCTT
GTTTCATCTCTCCAACCTTGACCCCTGTCTGTGCCTCTTTTTTCTTCATG
AGTAAAGAGCGCACTAGTTTTGTCTGATTTTTTCCTAGAGGAATTTTCGT
GTGTGGCGAATTTATTTATGAATCTTAGTCGGTGGAACTTTGTTCGATTT
TTGTCTTCATTCCGTACTTGGATGGCGGAAAGCAAGAGTCGCAAATATTG
GGAGATGTGATGGTAACACGCGAGTAAAGAATGGCCACCGAGAATAGACA
CGTTCGCACGCCCAATGAAGCAAAACCGTGTTAACTCTTATTCTGATTTT
CCTTGACGCTTTTGCTAAGAATATGTTTTTTTATACTACCTTTGTTGTTG
ACTATTTGCTGCGCTGACCTGGTTGACATACTAGCTGAATTTTTCGATAC
CACGTTGCGTGACACGACTCACTGTTTCGGGGGGGTGAGTATTTAAAGAT
TCTAAAATAGGCGGTTTTCTCAAGCGATGCGTCGTGTGCCCTACTTCTTT
TCTATTACGTCTATTTTTGTCTCCTTTTTAACAGGTAATTTCTGAAGCCA
AGACTCTCCTCGGTTCCAACAAGGCCGCGGTGGACAAGCTCATCCGAGAC
GAGAAAAAGAACTAAAATTAAACCGAACTCAACCAAGATCAAGGTTCGGA
CGCTCACAGAGATGAGGCGGCCTTTGAGCGTCAAGCCTAATTTCACAAGC
AGTTTGGGATTGTGCGGAGAAACCTTTGCCTTTGAATGGCTGGAGTCGTG
GGTCGGGTGCTTTGATTG
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Coding sequence (CDS) from alignment at H-paniculata_contig3339:1282..6599-

>mRNA_H-paniculata_contig3339.8948.1 ID=mRNA_H-paniculata_contig3339.8948.1|Name=mRNA_H-paniculata_contig3339.8948.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1464bp|location=Sequence derived from alignment at H-paniculata_contig3339:1282..6599- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGTCTGGGATATGGGCGGCGTACAACAAGGCTCTGGCGAGCAACCCACT
TGTGGTCAAGGCCCTCACCTCCCTCACCGGCTTCACTGTGGGCGACATTC
TGGCACAAAAGTTCATCAACCCGGATGACGAATATGACATAATGCGAACT
GTGCGTCTAGATGTCTGGGATATGGGCGGCGTACAACAAGGCTCTGGCGA
GCAACCCACTTGTGGTCAAGGCCCTCACCTCCCTCACCGGCTTCACTGTG
GGCGACATTCTGGCACAAAAGTTCATCAACCCGGATGACGAATATGACAT
AATGCGAACTGTGCGTCTAGGGTCGTTTGGTGCCCTTGTGCACGGTCCCA
CCGGCCACTGGTTCTACGGCATGCTTGACAGCAAGATGCCTGGAACTGCA
CCCATGACCGTCGTGTCGAAGGTGGCGATAGACCAGGGTCGTTTGGTGCC
CTTGTGCACGGTCCCACCGGCCACTGGTTCTACGGCATGCTTGACAGCAA
GATGCCTGGAACTGCACCCATGACCGTCGTGTCGAAGGTGGCGATAGACC
AGACTATCTGGAACCCCATATTCGGACTCATGTTCTTCTCGTACCTGGGC
TTGGCCGAGGGCAAGTCTACGGATGAAATAGTGACGAAGATCAAGAATGA
CCTCCAGACAGCGGTCATGGGATCCTGGGCGGTGTGGGTGCCAGCTCACA
CGATCAACTTCAAGTTTGTGCCTACCTCTCAGCGGCTGCTATACATCAAC
ACCATCCAGACTATCTGGAACCCCATATTCGGACTCATGTTCTTCTCGTA
CCTGGGCTTGGCCGAGGGCAAGTCTACGGATGAAATAGTGACGAAGATCA
AGAATGACCTCCAGACAGCGGTCATGGGATCCTGGGCGGTGTGGGTGCCA
GCTCACACGATCAACTTCAAGTTTGTGCCTACCTCTCAGCGGCTGCTATA
CATCAACACCATCCAGATTGGGTACAACATATTCCTGTCGTTCTTGGGGA
ACAAGAAGGCGCCTGAGGAGGACGTGAAGTCCGCACTAGTAGCATCAGAC
GGAAAAATTGAGCGGCTCGCTGAGGACATCAAGGAGGACAGCAAGTACGG
TTCCTCCCAGGTCCACCTTTTTCCGCCATTATATTCTTGTTTCATCTCTC
CAACCTTGACCCCTGTCTGTGCCTCTTTTTTCTTCATGAGTAAAGAGCGC
ACTAGTTTTGTCTGAATTGGGTACAACATATTCCTGTCGTTCTTGGGGAA
CAAGAAGGCGCCTGAGGAGGACGTGAAGTCCGCACTAGTAGCATCAGACG
GAAAAATTGAGCGGCTCGCTGAGGACATCAAGGAGGACAGCAAGTACGGT
TCCTCCCAGGTCCACCTTTTTCCGCCATTATATTCTTGTTTCATCTCTCC
AACCTTGACCCCTGTCTGTGCCTCTTTTTTCTTCATGAGTAAAGAGCGCA
CTAGTTTTGTCTGA
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