mRNA_H-paniculata_contig33388.8946.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig33388.8946.1 vs. uniprot
Match: A0A8F0F7A5_9PHAE (Uncharacterized protein ycf35 n=1 Tax=Protohalopteris sp. TaxID=2843287 RepID=A0A8F0F7A5_9PHAE) HSP 1 Score: 204 bits (518), Expect = 1.780e-65 Identity = 107/134 (79.85%), Postives = 115/134 (85.82%), Query Frame = 1
Query: 1 MSHYTSIQTKYTNKGILRKVLKTLSYAYTENKSGNNIEILLLPTKKLSNSIYNNDCNDYLSLKLNLNDLSYNLITDSQSWTQKTLITGFLKDLELNYGYSETISQALELGFTRSKIINNDNNTKFIFQRCVEIK 402
MSHYTSIQTKYT+ IL+KVLK LSYAYTE+K G NIEIL LP KKLSNSIYNN+ NDYLSL LN + SYN+ITDSQSW QK LI FLKDLELNYGYSETI QAL+LGF RSKII+NDNN KFIFQRCVEIK
Sbjct: 1 MSHYTSIQTKYTSFKILKKVLKNLSYAYTEDKLGKNIEILFLPYKKLSNSIYNNNYNDYLSLSLN--NKSYNMITDSQSWAQKELIAEFLKDLELNYGYSETIFQALQLGFIRSKIISNDNNIKFIFQRCVEIK 132
BLAST of mRNA_H-paniculata_contig33388.8946.1 vs. uniprot
Match: A0A8F0F8T3_9PHAE (Uncharacterized protein ycf35 n=2 Tax=Laminariales TaxID=2886 RepID=A0A8F0F8T3_9PHAE) HSP 1 Score: 167 bits (423), Expect = 5.390e-51 Identity = 83/135 (61.48%), Postives = 106/135 (78.52%), Query Frame = 1
Query: 1 MSHYTSIQTKYTNKGILRKVLKTLSYAYTENKSGNNIEILLLPTKKLSNSIYNNDCNDYLSLKLNLNDLSYNLITDSQSWTQKTLITGFLKDLELNYGYSETISQALELGFTRSKIINNDN-NTKFIFQRCVEIK 402
MSHYTSI+TKYTN +L+KV+ L Y Y E+K +IE+ L+ +K L +SIYNN C +YLS K + +LSY++ITDSQSWTQK +I FLK LELNYGYSETI+QALELGF RSK++ +N N +F+FQRCVE+K
Sbjct: 1 MSHYTSIKTKYTNSNVLKKVINKLGYPYIEHKYNKDIEVPLVFSKNLKSSIYNNSCQNYLSFKFD--NLSYSIITDSQSWTQKEVINRFLKKLELNYGYSETITQALELGFVRSKVLTTNNKNNRFVFQRCVEVK 133
BLAST of mRNA_H-paniculata_contig33388.8946.1 vs. uniprot
Match: A0A0R6M4I4_UNDPI (Uncharacterized protein ycf35 n=27 Tax=Laminariales TaxID=2886 RepID=A0A0R6M4I4_UNDPI) HSP 1 Score: 157 bits (396), Expect = 6.700e-47 Identity = 79/135 (58.52%), Postives = 104/135 (77.04%), Query Frame = 1
Query: 1 MSHYTSIQTKYTNKGILRKVLKTLSYAYTENKSGNNIEILLLPTKKLSNSIYNNDCNDYLSLKLNLNDLSYNLITDSQSWTQKTLITGFLKDLELNYGYSETISQALELGFTRSKIINNDN-NTKFIFQRCVEIK 402
MSHYTSI+TKYTN +L+KV+ L Y Y E+ + NNIE+ ++ K L +SIY N +YL+ K N +LSY++ITDSQSWTQK +I+ FLK LELNYGYSETI QAL+LGF RSK++ +N N +F+FQRC+E+K
Sbjct: 1 MSHYTSIKTKYTNSNVLKKVINKLGYPYIEHNN-NNIEVPVIFPKNLKSSIYENSDQNYLAFKSN--NLSYDIITDSQSWTQKEIISNFLKKLELNYGYSETIHQALDLGFVRSKVLTTNNKNNRFVFQRCIEVK 132
BLAST of mRNA_H-paniculata_contig33388.8946.1 vs. uniprot
Match: A0A8F0JZI3_9PHAE (Uncharacterized protein ycf35 n=1 Tax=Desmarestia aculeata TaxID=62298 RepID=A0A8F0JZI3_9PHAE) HSP 1 Score: 151 bits (381), Expect = 1.320e-44 Identity = 77/136 (56.62%), Postives = 100/136 (73.53%), Query Frame = 1
Query: 1 MSHYTSIQTKYTNKGILRKVLKTLSYAYTENKSGNNIEILLLPTKKLSNSIYNNDCNDYLSLKLNLNDLSYNLITDSQSWTQKTLITGFLKDLELNYGYSETISQALELGFTRSKIINNDN-NTKFIFQRCVEIKS 405
MSHYTSI+TKYTN +L+KV+ L Y YTE IE+ ++ K L +SIY++ +YL+ + LSY+++TDSQSWTQK +I FLK LELNYGY ETI+QAL+LGF RSK+I +N N +FIFQRCVE+KS
Sbjct: 1 MSHYTSIKTKYTNLNVLKKVINKLGYPYTEQNFAKKIEVSIIHPKDLKSSIYDSYSQNYLAFQST--KLSYDMVTDSQSWTQKEIINTFLKKLELNYGYLETINQALDLGFIRSKVITTNNKNNRFIFQRCVEVKS 134
BLAST of mRNA_H-paniculata_contig33388.8946.1 vs. uniprot
Match: A0A6B7EZ45_9PHAE (Uncharacterized protein ycf35 n=1 Tax=Cladosiphon okamuranus TaxID=309737 RepID=A0A6B7EZ45_9PHAE) HSP 1 Score: 149 bits (376), Expect = 7.600e-44 Identity = 81/135 (60.00%), Postives = 98/135 (72.59%), Query Frame = 1
Query: 1 MSHYTSIQTKYTNKGILRKVLKTLSYAYTENKSGNNIEILLLPTKKLSNSIYNNDCNDYLSLKLNLNDLSYNLITDSQSWTQKTLITGFLKDLELNYGYSETISQALELGFTRSKIIN-NDNNTKFIFQRCVEIK 402
MSHYTSI+TKYTN IL+KV+ L + Y E+ NIEI + +K L + IY N ++YLS +L DLSYN+ITDSQSWTQK FLK +ELNYGYSETI+QALELGF RSK++ N NN +FIFQR VE K
Sbjct: 1 MSHYTSIKTKYTNPVILKKVINKLGHPYVEHNFNKNIEIPMHFSKTLKSKIYENSNDNYLSFELR--DLSYNIITDSQSWTQKEKTNVFLKKIELNYGYSETIAQALELGFIRSKVLTTNKNNNRFIFQRYVETK 133
BLAST of mRNA_H-paniculata_contig33388.8946.1 vs. uniprot
Match: A0A8F0JYK6_9PHAE (Uncharacterized protein ycf35 n=1 Tax=Chorda asiatica TaxID=1281577 RepID=A0A8F0JYK6_9PHAE) HSP 1 Score: 145 bits (366), Expect = 2.520e-42 Identity = 74/135 (54.81%), Postives = 99/135 (73.33%), Query Frame = 1
Query: 1 MSHYTSIQTKYTNKGILRKVLKTLSYAYTENKSGNNIEILLLPTKKLSNSIYNNDCNDYLSLKLNLNDLSYNLITDSQSWTQKTLITGFLKDLELNYGYSETISQALELGFTRSKIIN-NDNNTKFIFQRCVEIK 402
MSHYTSI+TKYTN +L++ + L Y + E+ NIE+ L + L +SIY+N N+YL LK DLSYN+ITD QSWT+K +I FLK LELNYGY+ETI+QA++LGF RSK++ N+ N +F+FQR VE+K
Sbjct: 1 MSHYTSIKTKYTNSRVLKEAINKLGYPFVEHHFNKNIEVSLNFSGNLKSSIYDNSQNNYLGLKKK--DLSYNIITDHQSWTEKEVINIFLKKLELNYGYAETINQAIDLGFVRSKVLTANNKNNRFVFQRYVEVK 133
BLAST of mRNA_H-paniculata_contig33388.8946.1 vs. uniprot
Match: D1J707_ECTSI (Uncharacterized protein ycf35 n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D1J707_ECTSI) HSP 1 Score: 145 bits (365), Expect = 3.570e-42 Identity = 79/135 (58.52%), Postives = 99/135 (73.33%), Query Frame = 1
Query: 1 MSHYTSIQTKYTNKGILRKVLKTLSYAYTENKSGNNIEILLLPTKKLSNSIYNNDCNDYLSLKLNLNDLSYNLITDSQSWTQKTLITGFLKDLELNYGYSETISQALELGFTRSKIIN-NDNNTKFIFQRCVEIK 402
MSHYTSI+TKYTN IL+KV+ L + Y E+ NIE+ L +K L ++IY+N +YL+ LN +LSY++ITDSQSWTQK I FLK +ELNYGYSETI+QAL+LGF RSK+ N N +FIFQR VEIK
Sbjct: 1 MSHYTSIKTKYTNPTILKKVITKLGHPYVEHNFNKNIEVPLNSSKTLKSNIYSNLNQNYLAFVLN--NLSYSIITDSQSWTQKERINIFLKKIELNYGYSETITQALDLGFIRSKVFTTNKKNNRFIFQRYVEIK 133
BLAST of mRNA_H-paniculata_contig33388.8946.1 vs. uniprot
Match: A0A7T8G5F1_SCYLO (Uncharacterized protein ycf35 n=4 Tax=Scytosiphonaceae TaxID=2891 RepID=A0A7T8G5F1_SCYLO) HSP 1 Score: 144 bits (363), Expect = 7.190e-42 Identity = 78/135 (57.78%), Postives = 99/135 (73.33%), Query Frame = 1
Query: 1 MSHYTSIQTKYTNKGILRKVLKTLSYAYTENKSGNNIEILLLPTKKLSNSIYNNDCNDYLSLKLNLNDLSYNLITDSQSWTQKTLITGFLKDLELNYGYSETISQALELGFTRSKIIN-NDNNTKFIFQRCVEIK 402
MSHYTSI+TKYTN IL+KV+ L + Y E+ IE+ + +K L +SIYN+ +YL+ L +LSY++ITDSQSWTQK I FLK +ELNYGYSETI+QAL+LGF RSK++ N NN +FIFQR VEIK
Sbjct: 1 MSHYTSIKTKYTNPNILKKVINKLGHPYVEHNLNKTIEVPINFSKSLKSSIYNDLNQNYLAF--GLRNLSYDIITDSQSWTQKERINIFLKKIELNYGYSETITQALDLGFIRSKVLTTNRNNNRFIFQRYVEIK 133
BLAST of mRNA_H-paniculata_contig33388.8946.1 vs. uniprot
Match: A0A2I4Q2L8_9PHAE (Uncharacterized protein ycf35 n=1 Tax=Dictyopteris divaricata TaxID=156996 RepID=A0A2I4Q2L8_9PHAE) HSP 1 Score: 142 bits (359), Expect = 2.740e-41 Identity = 74/134 (55.22%), Postives = 101/134 (75.37%), Query Frame = 1
Query: 1 MSHYTSIQTKYTNKGILRKVLKTLSYAYTENKSGNNIEILLLPTKKLSNSIYNNDCNDYLSLKLNLNDLSYNLITDSQSWTQKTLITGFLKDLELNYGYSETISQALELGFTRS-KIINNDNNTKFIFQRCVEI 399
MSHYT+I+TKY N +L+K + L++ YTE+K NIEI +P+K+LS +Y + +DY+S +LN L+Y++++D QSWTQK + FLK LE+NYGYSETISQALELGFTRS K++ N N KFIFQR V++
Sbjct: 1 MSHYTAIRTKYKNSLLLKKCINKLNHPYTEHKR--NIEIYTIPSKQLSVGLYQKNYSDYISFQLN--KLNYDMVSDLQSWTQKDSLNEFLKKLEVNYGYSETISQALELGFTRSRKVLGNKENNKFIFQRYVQV 130
BLAST of mRNA_H-paniculata_contig33388.8946.1 vs. uniprot
Match: A0A2R4QPY7_9PHAE (Uncharacterized protein ycf35 n=3 Tax=Fucaceae TaxID=3010 RepID=A0A2R4QPY7_9PHAE) HSP 1 Score: 141 bits (356), Expect = 8.850e-41 Identity = 76/137 (55.47%), Postives = 99/137 (72.26%), Query Frame = 1
Query: 1 MSHYTSIQTKYTNKGILRKVLKTLSYAYTENK--SGNNIEILLLPTKKLSNSIYNNDCNDYLSLKLNLNDLSYNLITDSQSWTQKTLITGFLKDLELNYGYSETISQALELGFTRSKIINNDN-NTKFIFQRCVEIK 402
MSHYT I+TKYTN IL+KV+ L Y Y ENK NIE+ ++ ++ L ++IY + +Y++ K + L Y++ITDSQSWT+K +IT FLK LELNYGYSETI QAL+LGF RSK+I +N N +FIFQR VE K
Sbjct: 1 MSHYTCIKTKYTNSNILKKVINKLGYPYIENKCQKNQNIEVPVIFSENLKSTIYQKNHRNYVAFKSD--KLDYDIITDSQSWTKKEIITRFLKKLELNYGYSETIYQALDLGFVRSKVITTNNKNNRFIFQRFVETK 135 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig33388.8946.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 13
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig33388.8946.1 >prot_H-paniculata_contig33388.8946.1 ID=prot_H-paniculata_contig33388.8946.1|Name=mRNA_H-paniculata_contig33388.8946.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=136bp MSHYTSIQTKYTNKGILRKVLKTLSYAYTENKSGNNIEILLLPTKKLSNSback to top mRNA from alignment at H-paniculata_contig33388:533..940+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig33388.8946.1 ID=mRNA_H-paniculata_contig33388.8946.1|Name=mRNA_H-paniculata_contig33388.8946.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=408bp|location=Sequence derived from alignment at H-paniculata_contig33388:533..940+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig33388:533..940+ >mRNA_H-paniculata_contig33388.8946.1 ID=mRNA_H-paniculata_contig33388.8946.1|Name=mRNA_H-paniculata_contig33388.8946.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=816bp|location=Sequence derived from alignment at H-paniculata_contig33388:533..940+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |