mRNA_H-paniculata_contig333.8922.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig333.8922.1 vs. uniprot
Match: A0A6H5JE24_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JE24_9PHAE) HSP 1 Score: 405 bits (1041), Expect = 3.240e-127 Identity = 237/384 (61.72%), Postives = 284/384 (73.96%), Query Frame = 1
Query: 247 GGMAPAVASAETGSGNAVGPKTVSRSFKMFLLAILCLQNAAYTMLRRWSKGVVKEEFSPSSVLLVGEAIKLVVSVFMTLSDSSATSAQGAGVVKLWWLLLASLPMAVPAVVFWMMNLLSYVSISRIDASTFTVCAQMKILTTAVFSMMLMQKRFHARKWRALVLLVLGVTLVSNGSLVTEGGTEEKKEVNLTYFIGVAAVVTEVTLSGFVSVFFEKVLKSRVVNLSVWDRNVQLAMYSIALYLPIALHEEGPILKGWSRYTVMVAILGSAGGLLVAFTTKYTDAVLKTFATSGAILVTTIAGYEFMDAPLDIPIMIGAACTVLSLYNYSDNGD---SPTKSSDVSQKNVEMMRGPNGRL----DEAAQGLLSRSGSPRHASESV 1377
GG A +S T S NA VS++ K LL +LCLQNA YTM RR+S GV+ E +S SSVL+ GE IKLV S MTL+DS +TSA+G GV KL WL+ AS PM +PAVVF++MNLLSYVS+ R+DASTFTVCAQMKILTTA+FS++LM + FHARKWRALVLLVLGVTLVSNGS V+ G E+ K V Y IGVAAV+ EV+LSGFVSVFFEKVLKSRVVNLSVWDRN QLAMYSI YLP+AL EEGP+ +GW+ ++++LGSAGG+LVA T KYTDAVLKTFATSGAI+VT + G+ + +PLDIPI +GA CTVLSL NYSD+G +P S +G G DEA LL+R+G+ +SES
Sbjct: 34 GGTASKASSPSTSSSNA----GVSKTVKAGLLIVLCLQNAVYTMHRRYSVGVLNETWSSSSVLMAGEVIKLVFSTVMTLADSGSTSAEGTGVRKLAWLVRASPPMCIPAVVFFVMNLLSYVSLKRVDASTFTVCAQMKILTTAIFSVVLMGRSFHARKWRALVLLVLGVTLVSNGSYVS-AGKEDTKGVGWQYVIGVAAVLAEVSLSGFVSVFFEKVLKSRVVNLSVWDRNFQLAMYSIVFYLPMALWEEGPLFQGWTVNAGILSVLGSAGGILVALTMKYTDAVLKTFATSGAIIVTAVGGHFTLGSPLDIPIGVGAGCTVLSLLNYSDDGAPVAAPDTGSGGGSNGTVAAKGSRGGDADGDDEAGLSLLTRTGA---SSEST 409
BLAST of mRNA_H-paniculata_contig333.8922.1 vs. uniprot
Match: D7G783_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G783_ECTSI) HSP 1 Score: 271 bits (694), Expect = 7.100e-80 Identity = 153/251 (60.96%), Postives = 186/251 (74.10%), Query Frame = 1
Query: 655 MKILTTAVFSMMLMQKRFHARKWRALVLLVLGVTLVSNGSLVTEGGTEEKKEVNLTYFIGVAAVVTEVTLSGFVSVFFEKVLKSRVVNLSVWDRNVQLAMYSIALYLPIALHEEGPILKGWSRYTVMVAILGSAGGLLVAFTTKYTDAVLKTFATSGAILVTTIAGYEFMDAPLDIPIMIGAACTVLSLYNYSDNGDSPTKSSDVSQKNVEMMRGPNGRL-------------DEAAQGLLSRSGSPRHAS 1368
MKILTTA+FS++LM + FHARKWRALVLLVLGVTLVSNGS V+ G E+KK V Y IGVAAV+ EV+LSGFVSVFFEKVLKSRVVNLSVWDRN QLAMYSI YLP+AL +EGP+ +GW+ ++++LGSAGG+LVA T KYTDAVLKTFATSGAI+VT + G+ + +PLDIPI +GA CTVLSL NYSD+G +P + D G NG + DEA LL+R+G+P ++
Sbjct: 1 MKILTTAIFSVVLMGRSFHARKWRALVLLVLGVTLVSNGSYVS-AGKEDKKGVGWEYVIGVAAVLAEVSLSGFVSVFFEKVLKSRVVNLSVWDRNFQLAMYSIVFYLPMALWDEGPLFQGWTVSAGILSVLGSAGGILVALTMKYTDAVLKTFATSGAIIVTAVGGHFTLGSPLDIPIGVGAGCTVLSLLNYSDDG-APVAAPDTGSGG-----GSNGTVAATGARGGDADGDDEAGLSLLTRTGAPSESA 244
BLAST of mRNA_H-paniculata_contig333.8922.1 vs. uniprot
Match: A0A7S3RKY8_EMIHU (Hypothetical protein n=2 Tax=Emiliania huxleyi TaxID=2903 RepID=A0A7S3RKY8_EMIHU) HSP 1 Score: 255 bits (651), Expect = 6.270e-72 Identity = 138/307 (44.95%), Postives = 203/307 (66.12%), Query Frame = 1
Query: 337 LLAILCLQNAAYTMLRRWSKGVVKEEFSPSSVLLVGEAIKLVVSVFMTL-SDSSATSAQGAGVVKLWWLLLASLPMAVPAVVFWMMNLLSYVSISRIDASTFTVCAQMKILTTAVFSMMLMQKRFHARKWRALVLLVLGVTLVSNGSLVTEG--GTEEKKEVNLTYFIGVAAVVTEVTLSGFVSVFFEKVLKSRVVNLSVWDRNVQLAMYSIALYLPIALHEEG-PILKGWSRYTVMVAILGSAGGLLVAFTTKYTDAVLKTFATSGAILVTTIAGYEFMDAPLDIPIMIGAACTVLSLYNYSDNGD 1245
+L + +QN AY ++RR+S+G ++E +S SSVLLV E K+ +S F + SD+ + G+ + K +L+ SL M VPAVV+ MN+L +VS+ IDA+TF + AQMK+ TTA+FS++L+Q++ H RKWRAL+ L LGV L+S+ ++ G K + +G+AA V +V LSGFVS++FEKVLKS+ SVWDRN QLA +SI +Y PI +H+ GW+ + A +G GG+LVA + KY D+++KT AT+GAI+ TTI F+D P +PI+ GA ++S+ NY+D GD
Sbjct: 81 ILGSVVVQNTAYALVRRYSRGALRETYSTSSVLLVMEVAKMALSAFQIVTSDAPSDVPSGSALSKYAYLITHSLTMLVPAVVYLAMNILGFVSLKYIDAATFAILAQMKVFTTAIFSVVLLQRKLHLRKWRALLTLTLGVVLISHEAMPKSAAAGDSRAKLAFAEFLLGIAASVGDVVLSGFVSIYFEKVLKSKTETYSVWDRNFQLAFWSILIYTPIMIHDNPRQPFAGWTPMAAVCAAVGGTGGVLVALSIKYADSIMKTIATTGAIVFTTILNAAFLDGPFTLPIVAGAVVVMVSVCNYNDRGD 387
BLAST of mRNA_H-paniculata_contig333.8922.1 vs. uniprot
Match: A0A7S0EIZ6_9EUKA (Hypothetical protein n=1 Tax=Phaeocystis antarctica TaxID=33657 RepID=A0A7S0EIZ6_9EUKA) HSP 1 Score: 244 bits (623), Expect = 2.190e-68 Identity = 139/315 (44.13%), Postives = 211/315 (66.98%), Query Frame = 1
Query: 322 SFKMFLLAILCLQNAAYTMLRRWSKGVVKEEFSPSSVLLVGEAIKLVVSVFMTLSDSSATSA-QGAGVVKLWWLLLASLPMAVPAVVFWMMNLLSYVSISRIDASTFTVCAQMKILTTAVFSMMLMQKRFHARKWRALVLLVLGVTLVSNGSL---VTEGGTEEKKEVNLT-YFIGVAAVVTEVTLSGFVSVFFEKVLKSRVVNLSVWDRNVQLAMYSIALYLPIALHEE--GPILKGWSRYTVMVAILGSAGGLLVAFTTKYTDAVLKTFATSGAILVTTIAGYEFMDAPLDIPIMIGAACTVLSLYNYSDNGD 1245
+ K+ +L + LQN AY + RR+S+G ++E +S SSVL+V EA K+++S+ M + + + G+ K ++LL S M VPAVV+ +MN+L +V++ IDA+TF++ AQMK+ TTA FS++++ + RKWRAL LV+GV L+S+ S+ + G T E +T + IG+AA + +V LSGFVS++FEKVLKS+ SVWDRN QLA +S+ +YLPI +++ P GWS T + A +G+ GG+LVA + K D+++KT AT+GAI++TT F+D P +PI GA V+S++NY+DNGD
Sbjct: 53 ALKLVVLIAVMLQNTAYALARRYSRGHLRETYSTSSVLMVMEASKMLLSMGMIVYAGAPSDVPSGSAGSKYFFLLRHSQKMMVPAVVYLVMNILGFVALGNIDAATFSIIAQMKVFTTATFSVLMLNRGLAPRKWRALTTLVIGVVLISHESMPKSLKTGATSAAHERQMTEWLIGMAASLGDVVLSGFVSIYFEKVLKSKSETYSVWDRNFQLAFWSMVIYLPIMIYDNPNNPF-AGWSGTTAVCAAVGALGGVLVALSIKLADSIMKTIATTGAIVLTTALNAVFLDGPYSLPIASGALVVVVSVFNYNDNGD 366
BLAST of mRNA_H-paniculata_contig333.8922.1 vs. uniprot
Match: A0A7S3AS17_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Haptolina ericina TaxID=156174 RepID=A0A7S3AS17_9EUKA) HSP 1 Score: 239 bits (611), Expect = 9.530e-67 Identity = 133/308 (43.18%), Postives = 205/308 (66.56%), Query Frame = 1
Query: 328 KMFLLAILCLQNAAYTMLRRWSKGVVKEEFSPSSVLLVGEAIKLVVSVFMTLSDSSATSA-QGAGVVKLWWLLLASLPMAVPAVVFWMMNLLSYVSISRIDASTFTVCAQMKILTTAVFSMMLMQKRFHARKWRALVLLVLGVTLVSNGSLVTEGGTEEKKEVNLTYFIGVAAVVTEVTLSGFVSVFFEKVLKSRVVNLSVWDRNVQLAMYSIALYLPIALHE--EGPILKGWSRYTVMVAILGSAGGLLVAFTTKYTDAVLKTFATSGAILVTTIAGYEFMDAPLDIPIMIGAACTVLSLYNYSDNG 1242
K+ +L + LQN AY ++RR+S+ ++ E +S SSVLL EA KL++S ++ + G + K +L+ S MAVPAV++ +MN+L +V+++ IDA+TF++ AQ+K+ +TA+FS+ ++ + RKWRAL L LGV L+S+ ++ + EK+ + IG+AA ++EV LSGF S++FEKVLKS+ SVWDRN QLA +S A+YLPI ++ E P GW+ T A +G+ GG+LVA + K+ D+++KT AT+GAI++TTI F+D PL +PI GA V+S++NY+D G
Sbjct: 52 KLVILVCVTLQNTAYALVRRYSRHIMHETYSTSSVLLAMEAAKLLLSAERLVNCGLPSDVPDGTAISKYCFLIRTSHKMAVPAVIYLIMNILGFVALAHIDAATFSIVAQLKVFSTAMFSVTVLGRSLPWRKWRALTTLTLGVILISHEAMPKNNNSAEKQRALSDWLIGMAACLSEVLLSGFASIYFEKVLKSKTETYSVWDRNFQLAFWSSAIYLPIMCYDNPEHPF-TGWTWVTGGCAAVGALGGVLVALSIKHADSIMKTIATTGAIVLTTILNVVFLDGPLSLPIFSGALVVVVSVFNYNDRG 358
BLAST of mRNA_H-paniculata_contig333.8922.1 vs. uniprot
Match: A0A0M0JIG0_9EUKA (Udp-n-acetylglucosamine n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0JIG0_9EUKA) HSP 1 Score: 239 bits (609), Expect = 1.540e-66 Identity = 134/314 (42.68%), Postives = 203/314 (64.65%), Query Frame = 1
Query: 328 KMFLLAILCLQNAAYTMLRRWSKGVVKEEFSPSSVLLVGEAIKLVVSVF-MTLSDSSATSAQGAGVVKLWWLLLASLPMAVPAVVFWMMNLLSYVSISRIDASTFTVCAQMKILTTAVFSMMLMQKRFHARKWRALVLLVLGVTLVSNGSLVTE-----GGTEEKKEVNLTYF-IGVAAVVTEVTLSGFVSVFFEKVLKSRVVNLSVWDRNVQLAMYSIALYLPIALHEE-GPILKGWSRYTVMVAILGSAGGLLVAFTTKYTDAVLKTFATSGAILVTTIAGYEFMDAPLDIPIMIGAACTVLSLYNYSDNGD 1245
+M +L + +QN AY +LRR+S+G ++E +S SS LLV E +K+++S + + G V K +L+ S M VPAV + +MN+L ++++ +DASTF++ AQMK+ TTAVFS++++ + H RKWRAL LVLGV L+SN ++ G + K + F IG+AA +V LSGFVS++FE VLKS+ SVWDRN+QLA +S+ +Y PI L++ GWS T++ A G+ GG+LVA + KYTD+++KT AT+G+I++TT+ F+ P +PI+ G V+S++NYSD GD
Sbjct: 47 RMTILISVTMQNTAYALLRRYSRGHLQERYSTSSALLVMEVVKILLSAQQIAFGGHQSDVPSGTFVSKFSFLIAHSWKMIVPAVTYLVMNILGFMALQHLDASTFSIIAQMKVFTTAVFSVLILGRSLHMRKWRALTTLVLGVILISNEAMPKMAHRRLGQLDSKTSEQMRSFAIGMAASFGDVLLSGFVSIYFEMVLKSKTETFSVWDRNLQLAFWSMLIYAPIMLYDRPNDPFGGWSVITLLCAACGALGGVLVALSIKYTDSIMKTIATTGSIVLTTVLNAAFLQGPFTLPILTGTIVVVISVFNYSDPGD 360
BLAST of mRNA_H-paniculata_contig333.8922.1 vs. uniprot
Match: R1DFE3_EMIHU (Uncharacterized protein n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=R1DFE3_EMIHU) HSP 1 Score: 239 bits (611), Expect = 1.560e-66 Identity = 135/312 (43.27%), Postives = 207/312 (66.35%), Query Frame = 1
Query: 328 KMFLLAILCLQNAAYTMLRRWSKGVVKEEFSPSSVLLVGEAIKLVVSVF-MTLSDSSATSAQGAGVVKLWWLLLASLPMAVPAVVFWMMNLLSYVSISRIDASTFTVCAQMKILTTAVFSMMLMQKRFHARKWRALVLLVLGVTLVSNGSLVTEGGTEEKKEVNLTYFIGVAAVVTEVTLSGFVSVFFEKVLKSRVVNLSVWDRNVQLAMYSIALYLPIALHEE-GPILKGWSRYTVMVAILGSAGGLLVAFTTKYTDAVLKTFATSGAILVTTIAGYEFMDAPLDIPIMIGAACTVLSLYNYSDNGDSPTK 1257
++ +L + LQN AY++ RR+S+G ++E++S SS L+V E K +S + + S++ + G + K +L S+ M VPA ++ MN+L +V++ +DA+TF V AQMK+L+TAVFS++++Q+R H RKWRAL LL GV L+S+ ++ + + + K ++ + +GVAAV EV LSGFVS++FEKVLKS+ SVWDRN QLA +SI +Y PI LH+ G GW+ A +G+AGG+LVA + KY D++LKT ATSGAI++TT +D P + I+ GA V ++++Y+D GD T+
Sbjct: 59 RLLVLVGVVLQNTAYSLARRYSRGTLQEKYSASSALIVMELAKGALSCWKIAYSEAPSDVPAGPLLSKCAFLARHSMTMLVPAAIYLAMNILGFVALQYLDAATFAVLAQMKVLSTAVFSVLILQRRLHVRKWRALTLLTTGVVLLSHEAMPKKTDSTQGKAMS-DFGVGVAAVGCEVLLSGFVSIYFEKVLKSKTEVYSVWDRNFQLAFWSILIYTPIMLHDRPGDPFGGWTPMAAACAAIGAAGGVLVALSIKYADSILKTIATSGAIVLTTALNAALLDGPWGLSIIAGAIVVVTAVFDYNDKGDPETR 369
BLAST of mRNA_H-paniculata_contig333.8922.1 vs. uniprot
Match: A0A6T7FS09_9EUKA (Hypothetical protein n=1 Tax=Coccolithus braarudii TaxID=221442 RepID=A0A6T7FS09_9EUKA) HSP 1 Score: 240 bits (613), Expect = 3.100e-66 Identity = 135/314 (42.99%), Postives = 205/314 (65.29%), Query Frame = 1
Query: 322 SFKMFLLAILCLQNAAYTMLRRWSKGVVKEEFSPSSVLLVGEAIKLVVS-VFMTLSDSSATSAQGAGVVKLWWLLLASLPMAVPAVVFWMMNLLSYVSISRIDASTFTVCAQMKILTTAVFSMMLMQKRFHARKWRALVLLVLGVTLVSN-GSLVTEGGTEE--KKEVNLTYFIGVAAVVTEVTLSGFVSVFFEKVLKSRVVNLSVWDRNVQLAMYSIALYLPIAL--HEEGPILKGWSRYTVMVAILGSAGGLLVAFTTKYTDAVLKTFATSGAILVTTIAGYEFMDAPLDIPIMIGAACTVLSLYNYSDNGD 1245
S K +L + LQN AY ++RR+S+G ++E +S SSVLLV E K ++S V + +SD + G+ + K +L+ L MAVPA+++ +MN L +++++ IDA+TF++ AQMK+ +TA+FS++++ + RKWRAL L LGV L+SN G V+ G + L Y +G+AA +V LSGFVS++FEKVLKS+ SVWDRN QLA +SI +Y+PI + H P L GW+ + A +G GG+LVA + K D+++KT AT+GAI++TT F+D P+ +PI+ G ++S+ NY+D GD
Sbjct: 118 SLKSLVLGAVVLQNTAYALVRRYSRGALRETYSTSSVLLVMEVCKFLLSAVQVVVSDDPSDVPSGSAMSKYIFLIRNGLVMAVPAIIYLVMNFLGFIALTHIDAATFSIVAQMKVFSTAIFSVLVLGRSLAPRKWRALATLTLGVMLISNEGKPVSSGPNVSLGNDKALLEYLLGLAACFGDVALSGFVSIYFEKVLKSKTETYSVWDRNFQLAFWSILVYVPIMIYDHPTNP-LYGWTPMAAVCAAVGGIGGVLVALSIKLADSIMKTIATTGAIVLTTALNAGFLDGPMSLPIITGGLVVLISVCNYNDTGD 430
BLAST of mRNA_H-paniculata_contig333.8922.1 vs. uniprot
Match: A0A7S2JMY7_9EUKA (Hypothetical protein n=1 Tax=Haptolina brevifila TaxID=156173 RepID=A0A7S2JMY7_9EUKA) HSP 1 Score: 236 bits (602), Expect = 2.080e-65 Identity = 131/321 (40.81%), Postives = 207/321 (64.49%), Query Frame = 1
Query: 310 TVSRSFKMFLLAILCLQNAAYTMLRRWSKGVVKEEFSPSSVLLVGEAIKLVVSVFMTLSDSSATSAQ-GAGVVKLWWLLLASLPMAVPAVVFWMMNLLSYVSISRIDASTFTVCAQMKILTTAVFSMMLMQKRFHARKWRALVLLVLGVTLVSNGSLVTEGGTEEKKEV------NLTYF-IGVAAVVTEVTLSGFVSVFFEKVLKSRVVNLSVWDRNVQLAMYSIALYLPIALHEEGPI-LKGWSRYTVMVAILGSAGGLLVAFTTKYTDAVLKTFATSGAILVTTIAGYEFMDAPLDIPIMIGAACTVLSLYNYSDNGD 1245
+ S K+ +L + LQN Y ++RR+S+G +KE++S SS LL E KL +S+ + G+ + K +L+ S M VPAV++ +MN+L ++++S +DASTF++ AQMK+ TTA+FS++++ ++ H RKWRAL L LGV L+SN +L + +E +L +F IG+ A + +V LSGF S++FE VLKS+ SVWDRN+QLA +S +Y PI +++ +GWS T+ + +G+ GG+LVA + K+TD+++KT AT+GAI++TTI F++ P +PI GA V+S++NY+D GD
Sbjct: 52 STSNFLKLTILVAVTLQNTGYALIRRYSRGHLKEKYSTSSALLTMELAKLALSMGQVAYGGHESDVPAGSALSKFSFLIAHSWKMMVPAVIYLIMNILGFLALSHLDASTFSIVAQMKVFTTAIFSVLILGRQLHMRKWRALTTLTLGVILISNEALPRAAAADASQEALRTHNADLRHFAIGMGASLGDVLLSGFASIYFEMVLKSKSETYSVWDRNLQLAFWSSLIYGPIMMYDNPSAPFQGWSIITMACSAVGALGGVLVALSIKHTDSIMKTIATTGAIVLTTILNAAFLNGPFTLPIWTGALIVVISVFNYNDRGD 372
BLAST of mRNA_H-paniculata_contig333.8922.1 vs. uniprot
Match: A0A7S0IMW4_9EUKA (Hypothetical protein n=1 Tax=Calcidiscus leptoporus TaxID=127549 RepID=A0A7S0IMW4_9EUKA) HSP 1 Score: 235 bits (600), Expect = 3.660e-65 Identity = 131/314 (41.72%), Postives = 206/314 (65.61%), Query Frame = 1
Query: 322 SFKMFLLAILCLQNAAYTMLRRWSKGVVKEEFSPSSVLLVGEAIKLVVS-VFMTLSDSSATSAQGAGVVKLWWLLLASLPMAVPAVVFWMMNLLSYVSISRIDASTFTVCAQMKILTTAVFSMMLMQKRFHARKWRALVLLVLGVTLVSNGSLV---TEGGTEEKKEVNLTYFIGVAAVVTEVTLSGFVSVFFEKVLKSRVVNLSVWDRNVQLAMYSIALYLPIALHE--EGPILKGWSRYTVMVAILGSAGGLLVAFTTKYTDAVLKTFATSGAILVTTIAGYEFMDAPLDIPIMIGAACTVLSLYNYSDNGD 1245
S + +L + LQN AY ++RR+S+G ++E++S SSVLLV E K ++S V + +SD + G K +L+ L MAVPA+++ +MN L +++++ IDA+TF++ AQMK+ +TA+FS++++ +R RKWRAL L LGV L+S+ ++ + G T + + YF G+AA +V LSGFVS++FEKVLKS+ SVWDRN QLA +SI +Y+PI ++E + P GW+ + A +G GG+LVA + K D+++KT AT+GAI++TT F+D P+ + I+ G ++S+ NY+D GD
Sbjct: 61 SLRTLVLGAVVLQNTAYALVRRYSRGSLREKYSSSSVLLVMEIAKFLLSAVQIVVSDEQSDVPSGTAFSKYIFLIRHGLVMAVPAIIYLVMNFLGFIALTHIDAATFSIIAQMKVFSTAIFSVIVLGRRLAPRKWRALATLTLGVMLISHEAMPRTSSGGSTLIGDKAFVEYFFGLAACFGDVMLSGFVSIYFEKVLKSKTETYSVWDRNFQLAFWSILIYVPIMMYEHPKNPF-YGWTPMAAVCAAVGGIGGVLVALSIKLADSIMKTIATTGAIVLTTALNAGFLDGPMSLTIISGGLVVLISVCNYNDQGD 373 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig333.8922.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig333.8922.1 >prot_H-paniculata_contig333.8922.1 ID=prot_H-paniculata_contig333.8922.1|Name=mRNA_H-paniculata_contig333.8922.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=434bp MSSTPAAYIEGRTTNIAPKAIPSSSTEVEAQGSAGSGIESLSPVPRQTLQback to top mRNA from alignment at H-paniculata_contig333:23356..33497+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig333.8922.1 ID=mRNA_H-paniculata_contig333.8922.1|Name=mRNA_H-paniculata_contig333.8922.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=10142bp|location=Sequence derived from alignment at H-paniculata_contig333:23356..33497+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig333:23356..33497+ >mRNA_H-paniculata_contig333.8922.1 ID=mRNA_H-paniculata_contig333.8922.1|Name=mRNA_H-paniculata_contig333.8922.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=2604bp|location=Sequence derived from alignment at H-paniculata_contig333:23356..33497+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |