prot_H-paniculata_contig3327.8912.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig3327.8912.1
Unique Nameprot_H-paniculata_contig3327.8912.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length722
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig3327.8912.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 518..651
e-value: 4.6E-42
score: 146.4
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 69..209
e-value: 2.9E-25
score: 90.7
coord: 210..321
e-value: 1.4E-35
score: 124.3
coord: 409..517
e-value: 1.1E-32
score: 114.8
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 332..408
e-value: 1.2E-22
score: 82.3
coord: 652..714
e-value: 1.7E-11
score: 45.9
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 350..509
IPR002885Pentatricopeptide repeatTIGRFAMTIGR00756TIGR00756coord: 484..512
e-value: 8.2E-6
score: 23.7
coord: 659..693
e-value: 1.1E-7
score: 29.6
coord: 167..201
e-value: 2.3E-5
score: 22.3
coord: 412..446
e-value: 4.6E-6
score: 24.5
coord: 202..235
e-value: 9.4E-9
score: 32.9
coord: 132..166
e-value: 8.1E-4
score: 17.4
coord: 238..271
e-value: 1.1E-7
score: 29.5
coord: 307..341
e-value: 1.0E-8
score: 32.8
coord: 377..407
e-value: 1.3E-6
score: 26.2
coord: 520..553
e-value: 2.0E-5
score: 22.5
coord: 272..306
e-value: 1.4E-5
score: 23.0
coord: 342..375
e-value: 1.2E-12
score: 45.2
coord: 589..622
e-value: 1.6E-9
score: 35.4
coord: 554..587
e-value: 2.9E-5
score: 21.9
coord: 625..657
e-value: 4.9E-6
score: 24.4
coord: 448..482
e-value: 9.4E-8
score: 29.8
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 586..633
e-value: 1.7E-13
score: 50.5
coord: 518..564
e-value: 2.7E-8
score: 33.9
coord: 656..703
e-value: 2.2E-11
score: 43.7
coord: 446..494
e-value: 8.7E-11
score: 41.9
IPR002885Pentatricopeptide repeatPFAMPF13812PPR_3coord: 362..421
e-value: 7.1E-9
score: 35.6
coord: 292..354
e-value: 6.0E-18
score: 64.7
coord: 187..248
e-value: 4.7E-15
score: 55.4
coord: 124..177
e-value: 1.7E-11
score: 44.0
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 517..551
score: 9.854
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 305..339
score: 13.176
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 340..374
score: 14.491
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 410..440
score: 10.457
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 165..199
score: 10.896
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 446..480
score: 12.068
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 622..656
score: 11.06
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 587..621
score: 12.419
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 270..304
score: 10.687
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 375..409
score: 10.797
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 481..515
score: 10.238
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 200..234
score: 13.274
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 130..164
score: 10.26
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 657..691
score: 12.003
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 235..269
score: 10.95
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 552..586
score: 11.213
NoneNo IPR availablePANTHERPTHR46128FAMILY NOT NAMEDcoord: 134..297
coord: 390..580
coord: 562..705
coord: 290..439
coord: 112..176

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig3327contigH-paniculata_contig3327:11041..13206 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig3327.8912.1mRNA_H-paniculata_contig3327.8912.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig3327 2685..13677 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig3327.8912.1 ID=prot_H-paniculata_contig3327.8912.1|Name=mRNA_H-paniculata_contig3327.8912.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=722bp
MALRCATRGVKDSIAITRRVSRLQQHAVLIYRLSQSGISSTAKLANGSTV
SSHQGPSGWSAAKAGSPSRRARGKRQIRGKVHETWTSDSVRVHREYMGRL
KMAGERKNWVEAKKTLGEALARDDAGFVVNKYIYNAAVNVAAKCGKLEAA
MGVVSFMREEGVDPNVVTYNSLIHACGRSIKVGQISSLLAEMRGEGIAPN
AVTFTSAIDAYKKCGEVEKALSIFKEMKREGVAPTVMAYNAAIGACGKGK
DVEQALSLLGEMQTEGVSPNAVSYHSAITACGEGGEWRQSLSLLQEMRRK
GIVLDAVSYNSAINACRKTGQPEQALNVLREMQEEGIAPNVVTYNTIISA
FGKNGNVEKALSLLREMQQNGIVPTAVSFNSAISACAKGGQWEQAVSLLQ
EMQEEHVPQTLISYNATINACAECGQWKQALSMFREMQKRPGFIADIVSY
NTMIKACAIGGQWEQALAILREMQTGSIAPNEASYGTAISACAKQGQWEE
ASCLLREMQSLGDRNQLVASYNLAIKLCGDGGQWEQALSLLSYMQRENIS
PNAVSYNLAITVCADSGQSEKASSLLVEMQREGITPTIVTYGAVITAFGK
NGQWEKALALFREMQNESVIPNIASYNTLITACGTGGQWQQALSLLREME
TEVLTPNIVSYNAAMSACGDGGQWKHALSLLDEMKTGGVSPNTVSYNSAI
QAYRQRSVVEGSSVAADGNVE*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011990TPR-like_helical_dom_sf
IPR002885Pentatricopeptide_repeat