mRNA_H-paniculata_contig3326.8911.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig3326.8911.1 vs. uniprot
Match: D7FJU1_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FJU1_ECTSI) HSP 1 Score: 340 bits (872), Expect = 6.270e-105 Identity = 157/214 (73.36%), Postives = 182/214 (85.05%), Query Frame = 1
Query: 1 RYTHLRLNIFPDGGIARLRVHGAVERSWAGVPLDEEIDLLSVENGGSEVGCSNHHYGQPKNMIKSGRGLNMGDGWETARKPDRPAILELGSNGLVKAPGSDWAVLKLGLAGEITRLVVDTDHFKGNFPESVSVDACFAPEAQTHDFLDGVGGSGMAWRPLLLRQKTGPSREHIFELSKGKIEKLGPVSHVKLSIMPDGGVMRLRCFGLRAATAQ 642
+YTHLRLN+FPDGGIARL+VHG VERSW GVP D EIDLLSVENGG EV CSNHHYG+PKNMIK GRG+NMGDGWETARK DRP +LE+G +GLVKAPGSDWA+L+LG+ GE+ RLVVDT+HFKGNFPES+ V+AC +P+A DF DG G M WRPLL R K G SREH+F+L KG+IE LGP+SHVKLS+MPDGGVMRLR FG RA +++
Sbjct: 174 KYTHLRLNMFPDGGIARLKVHGIVERSWDGVPHDAEIDLLSVENGGVEVACSNHHYGEPKNMIKPGRGINMGDGWETARKTDRPTVLEIGPDGLVKAPGSDWAILRLGVIGEVKRLVVDTNHFKGNFPESILVEACLSPDALDSDFADG--GERMRWRPLLPRHKAGSSREHVFDLGKGEIENLGPISHVKLSMMPDGGVMRLRAFGTRAPSSR 385
BLAST of mRNA_H-paniculata_contig3326.8911.1 vs. uniprot
Match: A0A836C8W1_9STRA (Galactose-binding domain-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C8W1_9STRA) HSP 1 Score: 259 bits (663), Expect = 1.780e-74 Identity = 124/210 (59.05%), Postives = 156/210 (74.29%), Query Frame = 1
Query: 4 YTHLRLNIFPDGGIARLRVHGAVERSWAGVPLDEEIDLLSVENGGSEVGCSNHHYGQPKNMIKSGRGLNMGDGWETARKPDRPAILELGSNGLVKAPGSDWAVLKLGLAGEITRLVVDTDHFKGNFPESVSVDACFAPEAQTHDFLDGVGGSGMAWRPLLLRQKTGPSREHIFELSKGKIEKLGPVSHVKLSIMPDGGVMRLRCFGLRAA 633
+THLRLN++PDGGIARLRV G V R WA VP +DL +VENGG +GCS+ H+G+P+N+I GRG MGDGWETARKP RPA+L++G++GLV+APGSDWAV++LG AGEI+RLVVDT FKGNFPESV+VDA A D + + WR LL R K GP REH FE + ++GPV+H++L++ PDGGVMRLR FG + A
Sbjct: 197 FTHLRLNMYPDGGIARLRVRGVVRRDWARVPPRAVLDLAAVENGGVALGCSDRHFGEPRNLILPGRGATMGDGWETARKPTRPAVLQVGADGLVEAPGSDWAVIRLGTAGEISRLVVDTHFFKGNFPESVAVDAAAAAGGNEGDL------TALPWRALLPRTKMGPDREHAFE--GADLRRVGPVTHLRLTMFPDGGVMRLRAFGTKEA 398
BLAST of mRNA_H-paniculata_contig3326.8911.1 vs. uniprot
Match: W7U1M7_9STRA (Allantoicase n=4 Tax=Monodopsidaceae TaxID=425072 RepID=W7U1M7_9STRA) HSP 1 Score: 224 bits (571), Expect = 1.680e-61 Identity = 109/212 (51.42%), Postives = 145/212 (68.40%), Query Frame = 1
Query: 1 RYTHLRLNIFPDGGIARLRVHGAVERSWAGVPLDEEIDLLSVENGGSEVGCSNHHYGQPKNMIKSGRGLNMGDGWETARKPDRPAILELGSNGLVKAPGSDWAVLKLGLAGEITRLVVDTDHFKGNFPESVSVDACFAPEAQTHDFLDGVGGSG-MAWRPLLLRQKTGPSREHIFELSK--GKIEKLGPVSHVKLSIMPDGGVMRLRCFGLR 627
R+THLRLN+FPDGGIARLRV+G V R+W VP + +DL +VENGG +GCS+ HYG P+N+I GRG+NMGDGWETARK RP +LE GL+K PGSDWAVL+LG G++ L +DT FKGN+PES V+A P +++ + G + WR LL R K G ++ F++ G+ E G V+H+KL+I PDGG+ R+R G +
Sbjct: 190 RFTHLRLNMFPDGGIARLRVYGIVARAWHLVPATQVVDLAAVENGGKAIGCSDKHYGHPRNLINPGRGINMGDGWETARKLTRPPVLEPDEGGLIKVPGSDWAVLRLGTPGKVRELEIDTCWFKGNYPESCQVEAVELPLDMSNEDVHKAQELGEVPWRILLPRTKLGADQQAYFDVGAEGGRAEAGGAVTHLKLTIYPDGGISRVRARGTK 401
BLAST of mRNA_H-paniculata_contig3326.8911.1 vs. uniprot
Match: A0A2R2MNJ6_LINUN (Allantoate amidinohydrolase n=1 Tax=Lingula unguis TaxID=7574 RepID=A0A2R2MNJ6_LINUN) HSP 1 Score: 218 bits (555), Expect = 1.910e-59 Identity = 102/217 (47.00%), Postives = 146/217 (67.28%), Query Frame = 1
Query: 4 YTHLRLNIFPDGGIARLRVHGAVERSWAGVPLDEEIDLLSVENGGSEVGCSNHHYGQPKNMIKSGRGLNMGDGWETARKPDRPAILELGSNGLVKAPGSDWAVLKLGLAGEITRLVVDTDHFKGNFPESVSVDACFAPEAQTHDFLDGVGGSGMAWRPLLLRQKTGPSREHIFELSKGKIEKLGPVSHVKLSIMPDGGVMRLRCFGLRAATAQGQDL 654
+THLRLN+FPDGGIARLRV+G +R W+ V D +DL+++ NGG +G SN H+G P+N++ G G NMGDGWETAR+ DRPA+L +G+++ PG +WAV +LG G + + +DT HFKGNFP+S ++AC P + L + SG W+ LLL QK P+REH + K +++ +G +SH++L + PDGGV R+R +GL+ A L
Sbjct: 179 WTHLRLNMFPDGGIARLRVYGQAKRDWSLVDKDTVVDLVAMVNGGVCLGSSNAHFGHPRNLVAPGTGENMGDGWETARRLDRPAVLTADKSGVLQVPGCEWAVFRLGCPGVVKEITLDTRHFKGNFPDSCRIEACNIPLSGEQQALSVM--SGPPWKTLLLPQKMTPNREHHY---KDEVQTIGTISHIRLFVAPDGGVSRMRIWGLKEDVALASKL 390
BLAST of mRNA_H-paniculata_contig3326.8911.1 vs. uniprot
Match: A0A7S0LN64_9EUKA (Hypothetical protein n=1 Tax=Coccolithus braarudii TaxID=221442 RepID=A0A7S0LN64_9EUKA) HSP 1 Score: 213 bits (541), Expect = 3.190e-59 Identity = 111/224 (49.55%), Postives = 146/224 (65.18%), Query Frame = 1
Query: 1 RYTHLRLNIFPDGGIARLRVHGAVERSWAGVPLDEE---IDLLSVENGGSEVGCSNHHYGQPKNMIKSGRGLNMGDGWETARKPDRPAILEL-GSNGLVKAPG-SDWAVLKLG-LAGEITRLVVDTDHFKGNFPESVSVDACFAPEAQTHDFLDGVGGSGMAWRPLLLRQKTGPSREHIFELSKGKIEKLGPVSHVKLSIMPDGGVMRLRCFGLRAATAQGQDL 654
R+TH+RLN PDGGIAR+RV G V R + E IDLLS NG +GCSN HYG+P+N+++ G NMG+GWETAR P RP +LE + G VK PG +W VL+L +A ++ LVVDT HF+GNFPESV ++AC AP A + LDG S + W+ LL R + GP +EH F S ++ +LG +SHV++SI PDGG+MR+R G AA + L
Sbjct: 28 RFTHIRLNSHPDGGIARMRVWGIVARDFDRELAYEAVGAIDLLSTLNGARALGCSNKHYGEPRNLLRPEPGANMGEGWETARNPHRPHVLETDAATGFVKMPGVREWCVLRLAAVASQLEELVVDTHHFRGNFPESVLIEACNAPAAPSSALLDGYDASPLEWKQLLPRTRLGPDQEHRF--SGAELTQLGAISHVRVSIFPDGGLMRVRAIGRAAAPMPNEGL 249
BLAST of mRNA_H-paniculata_contig3326.8911.1 vs. uniprot
Match: A0A0P7V9D1_SCLFO (Allantoate amidinohydrolase (Fragment) n=5 Tax=Scleropages formosus TaxID=113540 RepID=A0A0P7V9D1_SCLFO) HSP 1 Score: 215 bits (548), Expect = 8.760e-59 Identity = 105/209 (50.24%), Postives = 141/209 (67.46%), Query Frame = 1
Query: 1 RYTHLRLNIFPDGGIARLRVHGAVERSWAGVPLDEEIDLLSVENGGSEVGCSNHHYGQPKNMIKSGRGLNMGDGWETARKPDRPAILELGSNGLVKAPGSDWAVLKLGLAGEITRLVVDTDHFKGNFPESVSVDAC-FAPEAQTHDFLDGVG-GSGMAWRPLLLRQKTGPSREHIFELSKGKIEKLGPVSHVKLSIMPDGGVMRLRCFG 621
R TH+R N++PDGGIARLRV+G +R W+ V E++DLLS+ NGG +G SN H+G P+NMI GR NMGDGWETAR+ DRP +L+ G+++ PGS+WAV +LG G I+ + +DT+HFKGNFP+S ++AC EA+ H +G G G + WR LL QK P + F S +E VSH++L+I PDGGV RLR +G
Sbjct: 148 RVTHIRFNMYPDGGIARLRVYGVGQRDWSTVSSMEQVDLLSLANGGVCLGYSNAHFGHPRNMIGLGRAANMGDGWETARRLDRPRVLKANKEGMLQVPGSEWAVFRLGHPGAISLIEIDTNHFKGNFPDSCKIEACSLTSEAEEHCLREGWGSGQAVKWRTLLPPQKLKPHQRQFF--SGDALELTEAVSHIRLTIAPDGGVSRLRLWG 354
BLAST of mRNA_H-paniculata_contig3326.8911.1 vs. uniprot
Match: A0A3P8XYZ4_ESOLU (Allantoate amidinohydrolase n=7 Tax=Esox lucius TaxID=8010 RepID=A0A3P8XYZ4_ESOLU) HSP 1 Score: 215 bits (548), Expect = 1.980e-58 Identity = 104/214 (48.60%), Postives = 144/214 (67.29%), Query Frame = 1
Query: 1 RYTHLRLNIFPDGGIARLRVHGAVERSWAGVPLDEEIDLLSVENGGSEVGCSNHHYGQPKNMIKSGRGLNMGDGWETARKPDRPAILELGSNGLVKAPGSDWAVLKLGLAGEITRLVVDTDHFKGNFPESVSVDACFAPEAQTHDFLDGVGGS--GMAWRPLLLRQKTGPSREHIFELSKGKIEKLGPVSHVKLSIMPDGGVMRLRCFGLRAAT 636
R THLRLN++PDGGIARLRV+G ++ W+ V +E+DL+++ NGG +G S+ HYG P+NMI GR NMGDGWETAR+ DRP ILE+ NG+++ PG +WAVL+LG G I+++ +DT+HFKGNFP+S ++AC + +++ G S G WR +L QK H + S + GPVSH++L I PDGGV RLR +G +T
Sbjct: 179 RVTHLRLNMYPDGGIARLRVYGVGQKDWSCVTTKDEVDLVALVNGGVCLGYSDAHYGHPRNMIGLGRSANMGDGWETARRLDRPKILEVDVNGILQVPGYEWAVLRLGHPGVISQIEIDTNHFKGNFPDSCKIEACLLTPEEEREYMSGRWSSDPGKKWRVILPPQKLKAHHRHFY--SGDLLALSGPVSHMRLVIAPDGGVSRLRLWGRPTST 390
BLAST of mRNA_H-paniculata_contig3326.8911.1 vs. uniprot
Match: A0A4W4F7M1_ELEEL (Allantoate amidinohydrolase n=2 Tax=Electrophorus electricus TaxID=8005 RepID=A0A4W4F7M1_ELEEL) HSP 1 Score: 214 bits (545), Expect = 5.440e-58 Identity = 101/209 (48.33%), Postives = 140/209 (66.99%), Query Frame = 1
Query: 1 RYTHLRLNIFPDGGIARLRVHGAVERSWAGVPLDEEIDLLSVENGGSEVGCSNHHYGQPKNMIKSGRGLNMGDGWETARKPDRPAILELGSNGLVKAPGSDWAVLKLGLAGEITRLVVDTDHFKGNFPESVSVDACFAPEAQTHDFLDGVGG--SGMAWRPLLLRQKTGPSREHIFELSKGKIEKLGPVSHVKLSIMPDGGVMRLRCFG 621
R +H+RLN++PDGGIARLRV+G +R W+ VP +E+DL+++ NGG VG SN H+G P+NMI GR NM DGWETAR+ DRP +L++ NG+++ PG +WA+L+LG G IT++ +DT+HFKGNFP+S ++AC + F+ WR LL QK P H + S + GPV+HV+L I+PDGGV RLR +G
Sbjct: 174 RVSHIRLNMYPDGGIARLRVYGVGQRDWSTVPAQDEVDLVALVNGGVCVGYSNAHFGHPRNMIGLGRAENMADGWETARRLDRPKVLKMDKNGILRVPGFEWAILRLGHPGLITKIEIDTNHFKGNFPDSCKIEACDLTPEEEKSFISSKWSFDESPRWRMLLHPQKLKPHHRHFY--SGDSALQCGPVTHVRLVIVPDGGVSRLRLWG 380
BLAST of mRNA_H-paniculata_contig3326.8911.1 vs. uniprot
Match: A0A1V9YXF3_9STRA (Allantoicase n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YXF3_9STRA) HSP 1 Score: 213 bits (543), Expect = 5.840e-58 Identity = 103/211 (48.82%), Postives = 136/211 (64.45%), Query Frame = 1
Query: 4 YTHLRLNIFPDGGIARLRVHGAVERSWAGVPLDEEIDLLSVENGGSEVGCSNHHYGQPKNMIKSGRGLNMGDGWETARKPDRPAILELGSNGLVKAPGSDWAVLKLGLAGEITRLVVDTDHFKGNFPESVSVDACFAPEAQTHDFLDGVG--GSGMAWRPLLLRQKTGPSREHIFELSKGKIEKLGPVSHVKLSIMPDGGVMRLRCFGLRA 630
+THLR+N+FPDGGIARL+V G V W +P +D+++ NGG+ VG S+ HYG P +++ GRG+NMGDGWETARK RPA+L + ++GL+ PGSDW VLKLG G I R+ VDT HFKGNFPES ++ CF D D VG + WRPLL R K +H F + + VSHV+ ++ PDGG+ RLR +G +A
Sbjct: 166 WTHLRINMFPDGGIARLKVFGVVAVDWDKIPATTSVDMVAAANGGTVVGYSDAHYGHPMILLQPGRGVNMGDGWETARKKTRPAVLTVDASGLLTVPGSDWVVLKLGHVGVIDRVEVDTAHFKGNFPESAQLEGCF------FDGRDPVGVLAPSVVWRPLLPRTKLRADTQHFFSTADKSLVAADAVSHVRFTMYPDGGISRLRVWGRKA 370
BLAST of mRNA_H-paniculata_contig3326.8911.1 vs. uniprot
Match: UPI0006252A57 (allantoicase-like n=1 Tax=Athalia rosae TaxID=37344 RepID=UPI0006252A57) HSP 1 Score: 213 bits (543), Expect = 5.840e-58 Identity = 99/207 (47.83%), Postives = 136/207 (65.70%), Query Frame = 1
Query: 4 YTHLRLNIFPDGGIARLRVHGAVERSWAGVPLDEEIDLLSVENGGSEVGCSNHHYGQPKNMIKSGRGLNMGDGWETARKPDRPAILELGSNGLVKAPGSDWAVLKLGLAGEITRLVVDTDHFKGNFPESVSVDACFAPEAQTHDFLDGVGGSGMAWRPLLLRQKTGPSREHIFELSKGKIEKLGPVSHVKLSIMPDGGVMRLRCFGL 624
+THLRLNIFPDGGIARLRV G W + E+IDL++ ENG G S+ HYG P+N+IK GRG+NMGDGWETAR+ DRP +LE +G+++ PGS+WA KLG G + + VDT HFKGNFP+SV ++ A E Q + W+ ++ +K P ++H +E+ + GPVSHV++++ PDGG+ R+R FGL
Sbjct: 176 WTHLRLNIFPDGGIARLRVFGLTTPDWNRINRKEQIDLIACENGAVCEGYSDAHYGHPRNLIKPGRGINMGDGWETARRLDRPPVLEADDSGMLRVPGSEWAFFKLGHVGVVRSIEVDTQHFKGNFPDSVKIEGVLATENQDP--------TSFTWKTIMAPKKLSPDKQHYYEIDD--LVSCGPVSHVRITMAPDGGISRVRIFGL 372 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig3326.8911.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig3326.8911.1 >prot_H-paniculata_contig3326.8911.1 ID=prot_H-paniculata_contig3326.8911.1|Name=mRNA_H-paniculata_contig3326.8911.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=161bp MIKSGRGLNMGDGWETARKPDRPAILELGSNGLVKAPGSDWAVLKLGLAGback to top mRNA from alignment at H-paniculata_contig3326:5426..16809- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig3326.8911.1 ID=mRNA_H-paniculata_contig3326.8911.1|Name=mRNA_H-paniculata_contig3326.8911.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=11384bp|location=Sequence derived from alignment at H-paniculata_contig3326:5426..16809- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig3326:5426..16809- >mRNA_H-paniculata_contig3326.8911.1 ID=mRNA_H-paniculata_contig3326.8911.1|Name=mRNA_H-paniculata_contig3326.8911.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=966bp|location=Sequence derived from alignment at H-paniculata_contig3326:5426..16809- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |