mRNA_H-paniculata_contig331.8883.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig331.8883.1 vs. uniprot
Match: D8LN08_ECTSI (Cilia- and flagella-associated protein 418 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LN08_ECTSI) HSP 1 Score: 172 bits (435), Expect = 3.730e-51 Identity = 74/106 (69.81%), Postives = 84/106 (79.25%), Query Frame = 1
Query: 4 RCGRVFLAGADAPRGYAASSISQRACDNLRCTDCNFKVMCFSGKAWDVATDYIFLRNNAPDLDKLCARLQPSSDVCAYACQCSWQNVVELNSLSPTGRPPWTCGGH 321
RCG VF+ G RG+ ASS+SQRACD LRCTDCNF+V+CF G+AWD TDY+FLRNN PD DKL ARL P SD CAYACQCSWQNV ++ +LSPT RP W CGGH
Sbjct: 193 RCGTVFVGGVATDRGFCASSLSQRACDKLRCTDCNFEVLCFHGRAWDDQTDYMFLRNNVPDTDKLSARLTPCSDSCAYACQCSWQNVKDVRALSPTERPRWACGGH 298
BLAST of mRNA_H-paniculata_contig331.8883.1 vs. uniprot
Match: A0A1L8FZM7_XENLA (Cilia- and flagella-associated protein 418 n=1 Tax=Xenopus laevis TaxID=8355 RepID=A0A1L8FZM7_XENLA) HSP 1 Score: 114 bits (286), Expect = 7.330e-30 Identity = 51/107 (47.66%), Postives = 71/107 (66.36%), Query Frame = 1
Query: 1 RRCGRVFLAGADAPRGYAASSISQRACDNLRCTDCNFKVMCFSGKAWDVATDYIFLRNNAPDLDKLCARLQPSSDVCAYACQCSWQNVVELNSLSPTGRPPWTCGGH 321
++CG V++AG+ P G +SIS+RACD LRCT C+F VM F + WD + DY+F RN+ PDL KL +L+ AYACQCSW++V EL +++ + W CG H
Sbjct: 92 KKCGPVYVAGSSIPFGIG-TSISERACDQLRCTACDFTVMIFDDRQWDESCDYLFFRNSMPDLSKLQPKLKRKKGARAYACQCSWKSVQELTNITTYSQLRWVCGKH 197
BLAST of mRNA_H-paniculata_contig331.8883.1 vs. uniprot
Match: UPI0010A84C0C (protein C8orf37 homolog isoform X2 n=1 Tax=Ornithorhynchus anatinus TaxID=9258 RepID=UPI0010A84C0C) HSP 1 Score: 113 bits (283), Expect = 1.820e-29 Identity = 54/107 (50.47%), Postives = 67/107 (62.62%), Query Frame = 1
Query: 1 RRCGRVFLAGADAPRGYAASSISQRACDNLRCTDCNFKVMCFSGKAWDVATDYIFLRNNAPDLDKLCARLQPSSDVCAYACQCSWQNVVELNSLSPTGRPPWTCGGH 321
+RC V+L G+ AP G ++ISQR CD LRCT C+F+V+ F WD + DY+F RNN P+L KL ARL AYACQCSW++V EL L R W CG H
Sbjct: 87 KRCCPVYLGGSSAPWGIG-TNISQRTCDQLRCTACDFRVLSFDDYLWDKSCDYLFFRNNMPELGKLKARLVKKKGTRAYACQCSWRSVEELIDLQTAQRLHWVCGQH 192
BLAST of mRNA_H-paniculata_contig331.8883.1 vs. uniprot
Match: A0A6I8NGA9_ORNAN (Cilia- and flagella-associated protein 418 n=2 Tax=Ornithorhynchus anatinus TaxID=9258 RepID=A0A6I8NGA9_ORNAN) HSP 1 Score: 113 bits (283), Expect = 2.240e-29 Identity = 54/107 (50.47%), Postives = 67/107 (62.62%), Query Frame = 1
Query: 1 RRCGRVFLAGADAPRGYAASSISQRACDNLRCTDCNFKVMCFSGKAWDVATDYIFLRNNAPDLDKLCARLQPSSDVCAYACQCSWQNVVELNSLSPTGRPPWTCGGH 321
+RC V+L G+ AP G ++ISQR CD LRCT C+F+V+ F WD + DY+F RNN P+L KL ARL AYACQCSW++V EL L R W CG H
Sbjct: 95 KRCCPVYLGGSSAPWGIG-TNISQRTCDQLRCTACDFRVLSFDDYLWDKSCDYLFFRNNMPELGKLKARLVKKKGTRAYACQCSWRSVEELIDLQTAQRLHWVCGQH 200
BLAST of mRNA_H-paniculata_contig331.8883.1 vs. uniprot
Match: A0A6I8RHQ8_XENTR (Cilia- and flagella-associated protein 418 n=1 Tax=Xenopus tropicalis TaxID=8364 RepID=A0A6I8RHQ8_XENTR) HSP 1 Score: 112 bits (280), Expect = 5.880e-29 Identity = 51/107 (47.66%), Postives = 69/107 (64.49%), Query Frame = 1
Query: 1 RRCGRVFLAGADAPRGYAASSISQRACDNLRCTDCNFKVMCFSGKAWDVATDYIFLRNNAPDLDKLCARLQPSSDVCAYACQCSWQNVVELNSLSPTGRPPWTCGGH 321
++CG V++AG+ P G +SIS+RACD LRCT C+F VM F WD + DY+F RN+ PDL KL +L AYACQCSW++V EL +++ + W CG H
Sbjct: 92 KKCGPVYVAGSSVPFGIG-TSISERACDQLRCTACDFNVMVFDNSQWDASCDYLFFRNSMPDLSKLRPKLIRKKGSRAYACQCSWRSVQELTNITVYPQLRWVCGKH 197
BLAST of mRNA_H-paniculata_contig331.8883.1 vs. uniprot
Match: UPI0018F45712 (protein C8orf37 homolog n=1 Tax=Tachyglossus aculeatus TaxID=9261 RepID=UPI0018F45712) HSP 1 Score: 111 bits (278), Expect = 1.240e-28 Identity = 53/107 (49.53%), Postives = 67/107 (62.62%), Query Frame = 1
Query: 1 RRCGRVFLAGADAPRGYAASSISQRACDNLRCTDCNFKVMCFSGKAWDVATDYIFLRNNAPDLDKLCARLQPSSDVCAYACQCSWQNVVELNSLSPTGRPPWTCGGH 321
+RC V+L G+ AP G ++ISQR CD LRCT C+F+V+ F WD + DY+F RNN P+L KL ARL AYACQCSW++V EL L + W CG H
Sbjct: 94 KRCCPVYLGGSSAPLGIG-TNISQRTCDQLRCTACDFRVLSFDDCLWDKSCDYLFFRNNMPELSKLKARLVEKKGSRAYACQCSWRSVEELIDLQTAPQLHWVCGQH 199
BLAST of mRNA_H-paniculata_contig331.8883.1 vs. uniprot
Match: A0A6P6R137_CARAU (Cilia- and flagella-associated protein 418 n=7 Tax=Cyprininae TaxID=2743694 RepID=A0A6P6R137_CARAU) HSP 1 Score: 110 bits (275), Expect = 3.770e-28 Identity = 50/107 (46.73%), Postives = 67/107 (62.62%), Query Frame = 1
Query: 1 RRCGRVFLAGADAPRGYAASSISQRACDNLRCTDCNFKVMCFSGKAWDVATDYIFLRNNAPDLDKLCARLQPSSDVCAYACQCSWQNVVELNSLSPTGRPPWTCGGH 321
++C VFL G+ P G +S+SQRAC+ LRCT C+F V+ F + WD + DY+F RNN PD KL A+L+ + AYACQCSW + V L+ L + W CG H
Sbjct: 97 KKCCPVFLGGSSVPHGIG-TSVSQRACNRLRCTSCDFSVIMFEDQEWDSSCDYLFFRNNMPDHHKLKAKLRRKKNGRAYACQCSWHSAVSLSDLREQQQLKWVCGKH 202
BLAST of mRNA_H-paniculata_contig331.8883.1 vs. uniprot
Match: A0A663DTM3_AQUCH (Cilia- and flagella-associated protein 418 n=4 Tax=Aquila chrysaetos chrysaetos TaxID=223781 RepID=A0A663DTM3_AQUCH) HSP 1 Score: 108 bits (269), Expect = 9.050e-28 Identity = 49/107 (45.79%), Postives = 67/107 (62.62%), Query Frame = 1
Query: 1 RRCGRVFLAGADAPRGYAASSISQRACDNLRCTDCNFKVMCFSGKAWDVATDYIFLRNNAPDLDKLCARLQPSSDVCAYACQCSWQNVVELNSLSPTGRPPWTCGGH 321
+RC VFL G+ +P G ++IS+R CD LRCT C+F+V F+ WD + DY+F RNN P+L KL A++ AYACQCSW+++ EL L + W CG H
Sbjct: 51 KRCCPVFLGGSSSPYGIG-TNISKRTCDQLRCTACDFRVSLFNDYIWDQSCDYLFFRNNMPELSKLRAKMIKKKGARAYACQCSWRSIDELTDLQTDQQLRWVCGKH 156
BLAST of mRNA_H-paniculata_contig331.8883.1 vs. uniprot
Match: A0A4X2K8C9_VOMUR (Cilia- and flagella-associated protein 418 n=3 Tax=Diprotodontia TaxID=38609 RepID=A0A4X2K8C9_VOMUR) HSP 1 Score: 109 bits (272), Expect = 1.860e-27 Identity = 48/107 (44.86%), Postives = 67/107 (62.62%), Query Frame = 1
Query: 1 RRCGRVFLAGADAPRGYAASSISQRACDNLRCTDCNFKVMCFSGKAWDVATDYIFLRNNAPDLDKLCARLQPSSDVCAYACQCSWQNVVELNSLSPTGRPPWTCGGH 321
+RC V++ G+ AP G ++ SQR CD LRCT C+F+V+ F WD + DY+F RNN P+ +KL A++ + AYACQCSW++V EL L + W CG H
Sbjct: 120 KRCSPVYVGGSSAPCGIGTNT-SQRTCDQLRCTACDFRVLSFDDYKWDKSCDYLFFRNNMPEFNKLKAKMTKRKGIRAYACQCSWRDVEELTDLRTDQQLRWVCGKH 225
BLAST of mRNA_H-paniculata_contig331.8883.1 vs. uniprot
Match: UPI0004433CE9 (protein C8orf37 homolog isoform X3 n=1 Tax=Monodelphis domestica TaxID=13616 RepID=UPI0004433CE9) HSP 1 Score: 108 bits (269), Expect = 2.340e-27 Identity = 48/107 (44.86%), Postives = 65/107 (60.75%), Query Frame = 1
Query: 1 RRCGRVFLAGADAPRGYAASSISQRACDNLRCTDCNFKVMCFSGKAWDVATDYIFLRNNAPDLDKLCARLQPSSDVCAYACQCSWQNVVELNSLSPTGRPPWTCGGH 321
+RC V+L G+ AP G ++ SQR CD LRCT C+F+V+ F WD + DY+F RNN P+ KL A++ AYACQCSW+++ EL L + W CG H
Sbjct: 87 KRCSPVYLGGSSAPCGIGTNT-SQRTCDQLRCTACDFRVLSFDDYMWDKSCDYLFFRNNMPEFSKLKAKMIKQKGTRAYACQCSWRDIKELTDLRTDQQLRWVCGKH 192 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig331.8883.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig331.8883.1 >prot_H-paniculata_contig331.8883.1 ID=prot_H-paniculata_contig331.8883.1|Name=mRNA_H-paniculata_contig331.8883.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=108bp RRCGRVFLAGADAPRGYAASSISQRACDNLRCTDCNFKVMCFSGKAWDVAback to top mRNA from alignment at H-paniculata_contig331:29976..31256+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig331.8883.1 ID=mRNA_H-paniculata_contig331.8883.1|Name=mRNA_H-paniculata_contig331.8883.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=1281bp|location=Sequence derived from alignment at H-paniculata_contig331:29976..31256+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig331:29976..31256+ >mRNA_H-paniculata_contig331.8883.1 ID=mRNA_H-paniculata_contig331.8883.1|Name=mRNA_H-paniculata_contig331.8883.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=648bp|location=Sequence derived from alignment at H-paniculata_contig331:29976..31256+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |