mRNA_H-paniculata_contig3309.8877.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig3309.8877.1 vs. uniprot
Match: D7FVZ6_ECTSI (C2H2 zinc finger protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FVZ6_ECTSI) HSP 1 Score: 377 bits (967), Expect = 4.590e-117 Identity = 288/767 (37.55%), Postives = 341/767 (44.46%), Query Frame = 2
Query: 41 PLQRKCQILILGDGNFSFSLALARALLPQPPARRRSSMKTKDISHNNSDTSTQEHASTVGASDSSPGGPLSTNLPLPEDTTGEDKPNRSLHLSSHKFTIVATSFDGHQDLLHKYPEWVGINPKLRGLGVAVVHNVDATALDFRVL---------SELSVARYDHVVFNHPHTGTEDMRRHRSFLGHFFHALV-TPIADSGRYEGSGVSNSSTDNEKDRGVAGIHTDGSERHGTSAAVALAPGGVVHVTLAKDQPERWGLREQAARHGFVLAHRRLFPADCIEGYMTKRHQTGKSFQRRARDSITFSFVWMGRVKEGEHWPSLCEAKCRRGAMGEVSRELEQGTRAVGTGNDFGVGNSDGGEDEGEEGRGLRTESTDDGGTYD--LPPWLWPKVNIFGTELAGEQTGRAGRVQDPAAGEKLSGGDGGHDKSNGALVSGPVSAVGTRQANGGSIDDVSWSHENSNESTKGRNSRETAGNHDDR----------PEVCRQCGKRYKTAQALRTHTRQLHELHQKEGGFGACPEGSEPLTCLHCERVFTSRVALTQHESAKHNGAFRDIKPDWFEATIYHDCKPPSPSSSPLNKKTEAEATFSSRNASDGAQVEHNELLDRDIVHCEHLQGA--AVNPGQDERFGGVSGTSSSGETCATPTRRTRGSMMLGVTGRLVEAQQVEARQVGEEPGARDEEGNGAGVLKLGSSPSSSSVHCDVCGYWFVDEAQEQRHRDNLRPPVAEEVICHECALCKKRLGSRRALLQHSNFCT 2269
P ++ C+ILILGDGNFSFSLALA+ALL P T SSP L F IVATSFDG DLL KY E GI LR +GV V+HNVDATALD RVL ++ +++HV+FNHPHTGTEDMRRHRSFLGHFFHA+ + I +G G G + G ++R G A+ LAPGG VHVTLA DQPERWGL EQAARHGF L HRR FPA+ I+GYMTKRHQTG+SF++R + S T SF W A+ RG DDG + LPPWLWP+V + G E + + A +P GG D V P AV +++ + R G DR PEVC CGKRYK+AQALRTHTRQ HEL Q EGG P+ E +C RVFTS AL QH SAKH+G DIKPDWF +IYH +PP P D D+V G A N ++ GT+ E TP MLGV R V A V + EGN S CDVCGYWF Q+H DNLRPP+ V ++C C K GSRRALLQH+ FC+
Sbjct: 8 PKRQPCRILILGDGNFSFSLALAKALLLPP---------------------------TPHLLPSSP----------------------QARLQQQTFEIVATSFDGRLDLLSKYAEAPGIVAALRSVGVTVLHNVDATALDSRVLQVSPSDRRRAQQQQQQFEHVIFNHPHTGTEDMRRHRSFLGHFFHAVANSAIGSTGPVGGGGSGACGVSDIGGGGAVAAVPGMADRQGGKGAI-LAPGGAVHVTLALDQPERWGLEEQAARHGFSLVHRRRFPAEKIDGYMTKRHQTGRSFRQRVQASETLSFSW------------AASAQAARG---------------------------------------------DDGAAFGSTLPPWLWPEVVMCGDEASPARAETA--TDEPVRA-------GGSD-----AVDAPTPAV--------------------DDNVRTRGGGRKGGGCTDRTGAAAAEALLPEVCELCGKRYKSAQALRTHTRQFHELGQ-EGGVAVAPKKEERCPHPNCGRVFTSDRALDQHVSAKHSGDNVDIKPDWFVGSIYH-LEPPXXXXVPT---------------------------DGDMVVERGQDGGIPAANAAGSDQI--CRGTAEGAEATTTPKVVETPPEMLGVPAREVPATTV----------CTNIEGN------------SLCQRCDVCGYWFTSPEDLQQHLDNLRPPIEGAVTRYDCGTCVKDFGSRRALLQHAKFCS 580
BLAST of mRNA_H-paniculata_contig3309.8877.1 vs. uniprot
Match: A0A139AJ33_GONPJ (C2H2-type domain-containing protein n=1 Tax=Gonapodya prolifera (strain JEL478) TaxID=1344416 RepID=A0A139AJ33_GONPJ) HSP 1 Score: 116 bits (291), Expect = 1.580e-23 Identity = 101/293 (34.47%), Postives = 131/293 (44.71%), Query Frame = 2
Query: 41 PLQRKCQILILGDGNFSFSLALARALLPQPPARRRSSMKTKDISHNNSDTSTQEHAST--VGASDSSPGGPLSTNLPLPEDTTGEDKPNRSLHLS--SHKFTIVATSFDGHQDLLHKYPEWVGINPKL---RGLGVAVVHNVDATALDFRVLSELSVARYDHVVFNHPHTGTEDMRRHRSFLGHFFHALVTPIADSGRYEGSGVSNSSTDNEKDRGVAGIHTDGSERHGTSAAVALAPGGVVHVTLAKDQPERWGLREQAARHGFVLAHRRLFPADCIEGYMTKRHQTGKSFQ 898
P QR ++L+LGDGNFSFSLA+AR L + AR R+ K D H + Q+ T V A DS P + L + +G+ + HL I TSFD ++ + KY + GI +L +GL + V H V+A L+ L + D +V+NHPH GTED R HR L HFF SA AL PGG V V+L Q RW + EQA R GFVL H F GY KR++TG SF+
Sbjct: 27 PSQRISRVLVLGDGNFSFSLAVARFLWGEDGARGRTERKNGDRRHTTREDQDQDPDGTLRVDAMDS----PYAR--ALMDAGSGKTPAHEYFHLPPRDESLHITTTSFDTYEQVCSKYHDARGIIERLGRYQGL-LHVRHEVNAWELEKLELQ--APLGLDFIVWNHPHLGTEDFRLHRFLLAHFF-------------------------------------------KSAFSALKPGGRVLVSLVHGQDARWEITEQAVRSGFVLEHVEPFKEHLFPGYEPKRNRTGASFK 267
BLAST of mRNA_H-paniculata_contig3309.8877.1 vs. uniprot
Match: D0NMF8_PHYIT (Uncharacterized protein n=2 Tax=Phytophthora infestans TaxID=4787 RepID=D0NMF8_PHYIT) HSP 1 Score: 105 bits (262), Expect = 2.630e-20 Identity = 95/316 (30.06%), Postives = 132/316 (41.77%), Query Frame = 2
Query: 44 LQRKCQILILGDGNFSFSLALARALLPQPPARRRSSMKTKDISHNNSDTSTQEHASTVGASDSSPGGPLSTNLPLPEDTTGEDKPNRSLHLSSHKFTIVATSFDGHQDLLHKYPEWVGINPKLRGLGVAVVHNVDATAL-DFRVLSELSVARYDHVVFNHPHTGTEDMRRHRSFLGHFFHALVTPIADSGRYEGSGVSNSSTDNEKDRGVAGIHTDGSERHGTSAAVALAPGGVVHVTLAKDQPERWGLREQAARHGFVLAHRRLFPAD--CIEG--YMTKRHQTGKSF-------QRRARDSITFSFVWMGRVKE 955
LQR+C +L +GDGNFS+SLALA+ H N G D P + + ATS+D + +L+ KYPE I +L+ LG +V+H VDAT L + V + +D VVFNHPH G E++RRH+S L HF+ + + + DS EG+G+ +TLA+ QPERW E+A + G L HRR+ D + G Y KRHQ GKSF +R+ + S F F + E
Sbjct: 32 LQRRC-VLTVGDGNFSYSLALAKQ-------------------HKNQ---------------------------------GNDTPVQ----------LTATSYDSYNELVAKYPESKRICGQLKELGASVMHRVDATNLRESLVAAGAEQLTFDAVVFNHPHCGEENVRRHQSLLSHFYTSALEILEDSEEDEGNGIL--------------------------------------LTLAEGQPERWQAVERALQAGLRL-HRRVDDVDNDAVFGLKYERKRHQNGKSFHQVTLHGERKKQASTLFIFRRQNKATE 245
BLAST of mRNA_H-paniculata_contig3309.8877.1 vs. uniprot
Match: A0A2P4YUA0_9STRA (Uncharacterized protein n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4YUA0_9STRA) HSP 1 Score: 101 bits (251), Expect = 3.520e-19 Identity = 71/218 (32.57%), Postives = 103/218 (47.25%), Query Frame = 2
Query: 311 HLSSHKFTIVATSFDGHQDLLHKYPEWVGINPKLRGLGVAVVHNVDATALDFRVLSELSVARYDHVVFNHPHTGTEDMRRHRSFLGHFFHALVTPIADSGRYEGSGVSNSSTDNEKDRGVAGIHTDGSERHGTSAAVALAPGGVVHVTLAKDQPERWGLREQAARHGFVLAHRRLFPADCIEG----YMTKRHQTGKSF-------QRRARDSITFSF 931
H + + ATS+D + +L+ KYPE I +L+ LG +V+H VDAT + L + ++D VVFNHPH G E++RRH+S L HF+ + + + D+ EG+G+ +TLA+ QPERW E+A G L HR++ D E Y KRHQ GKSF +R+ + S F F
Sbjct: 60 HGNDPSLQLTATSYDSYDELVAKYPECKRICAQLKDLGASVLHRVDATNI-CESLGVEQLKKFDSVVFNHPHCGEENVRRHQSLLSHFYSSALEVLEDNEEDEGNGIL--------------------------------------LTLAEGQPERWQAVERALSAGLRL-HRQVDDVDNDEVFGLVYERKRHQNGKSFHHVTLHGERKKQKSTLFIF 237
BLAST of mRNA_H-paniculata_contig3309.8877.1 vs. uniprot
Match: A0A225VJE6_9STRA (Uncharacterized protein n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225VJE6_9STRA) HSP 1 Score: 100 bits (249), Expect = 1.070e-18 Identity = 74/232 (31.90%), Postives = 112/232 (48.28%), Query Frame = 2
Query: 278 TTGEDKPNRSLHLSSHKFT---IVATSFDGHQDLLHKYPEWVGINPKLRGLGVAVVHNVDATALDFRVLSELSVARYDHVVFNHPHTGTEDMRRHRSFLGHFFHALVTPIADSGRYEGSGVSNSSTDNEKDRGVAGIHTDGSERHGTSAAVALAPGGVVHVTLAKDQPERWGLREQAARHGFVLAHRRLFPADCIE----GYMTKRHQTGKSF-------QRRARDSITFSF 931
T G+ + SL L+ T + ATS+D + +L+ KYPE I +L+ LG +V+H VDAT + +++E ++D VVFNHPH G E++RRH+S L HF+ + + + ++ E +G+ +TLA+ QPERW E+A + G L HR++ D E Y KRHQ GKSF +R+ + S F F
Sbjct: 43 TVGDGNFSYSLALAKQTDTTLQLTATSYDSYDELVAKYPESKRICTQLKELGASVLHRVDATNIRESLVAE---QKFDSVVFNHPHCGEENVRRHQSLLSHFYASALDVLEENEENEWNGIL--------------------------------------LTLAEGQPERWQAVERAQKAGLRL-HRQVDNVDNDEVFGFAYERKRHQNGKSFHQVTLHGERKKQSSTLFIF 232
BLAST of mRNA_H-paniculata_contig3309.8877.1 vs. uniprot
Match: A0A1S8VN94_9FUNG (C2H2-type domain-containing protein n=2 Tax=Batrachochytrium salamandrivorans TaxID=1357716 RepID=A0A1S8VN94_9FUNG) HSP 1 Score: 101 bits (252), Expect = 1.410e-18 Identity = 93/291 (31.96%), Postives = 124/291 (42.61%), Query Frame = 2
Query: 53 KCQILILGDGNFSFSLALARALL-PQPPARRRSSMKTKDISHNNSDTSTQEHASTVGASDSSPGGPLSTNLPLPEDTTGEDKPNRSLHLSSHKFTIVATSFDGHQDLLHKYPEWVGI-----NPKLRGLGVAVVHNVDATALDFRVLSELSVARYDHVVFNHPHTGTEDMRRHRSFLGHFFHAL---VTPIADSGRYEGSGVSNSSTDNEKDRGVAGIHTDGSERHGTSAAVALAPGGVVHVTLAKDQPERWGLREQAARHGFVLAHRRLFPADCIEGYMTKRHQTGKSFQ 898
K ILILGDGNFSFSLAL+R L PQ P S H L T +D L S +VATSFD Q LL KY + I +P+ +G V V+H ++A L S + +D +++NHPH GTED R HR + HFFH++ + P +++G S SS+ + HG + GG V V+L + Q RW L QA R VL F GY+ KR++ G SF+
Sbjct: 14 KFNILILGDGNFSFSLALSRYLWHPQHP-------------------SIPPH--------------------LVHQTIAKDYLGLPLSFSESNIHLVATSFDSRQQLLAKYGDSKDILAALDDPRYKGF-VDVMHGINAWDLSAH-FSATVLGGFDLILWNHPHLGTEDFRLHRFLMAHFFHSVSQVLRPTSENGSTLPPSSSLSSSSKKS-------------MHGRDKS-----GGQVRVSLVQGQEVRWDLVRQAQRSHLVLESIAWFDESIWPGYVVKRNKHGGSFK 245
BLAST of mRNA_H-paniculata_contig3309.8877.1 vs. uniprot
Match: A0A0W8CDT8_PHYNI (Uncharacterized protein n=8 Tax=Phytophthora TaxID=4783 RepID=A0A0W8CDT8_PHYNI) HSP 1 Score: 98.2 bits (243), Expect = 6.030e-18 Identity = 70/211 (33.18%), Postives = 102/211 (48.34%), Query Frame = 2
Query: 335 IVATSFDGHQDLLHKYPEWVGINPKLRGLGVAVVHNVDATAL-DFRVLSELSVARYDHVVFNHPHTGTEDMRRHRSFLGHFFHALVTPIADSGRYEGSGVSNSSTDNEKDRGVAGIHTDGSERHGTSAAVALAPGGVVHVTLAKDQPERWGLREQAARHGFVLAHRRLFPADCIEG----YMTKRHQTGKSF-------QRRARDSITFSF 931
+ A+S+D + +L+ KYPE I +L+ LG +V+H VDAT L + V + ++D V+FNHPH G E++RRH+S L HF+ + + I D+ E SG+ +TLA+ QPERW E+A + G L HR++ D E Y KRHQ GKSF +R+ + S F F
Sbjct: 66 LTASSYDSYDELVAKYPECKRICAQLKELGASVLHRVDATNLRESLVAAGAEQLKFDAVIFNHPHCGEENVRRHQSLLSHFYASALDVIEDNEEDEESGIL--------------------------------------LTLAEGQPERWQAVERALKAGLRL-HRQVDEVDNDEVFGLVYDRKRHQNGKSFHQVTLHGERKKQASTLFIF 237
BLAST of mRNA_H-paniculata_contig3309.8877.1 vs. uniprot
Match: A0A8K1C3C0_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C3C0_PYTOL) HSP 1 Score: 96.3 bits (238), Expect = 2.460e-17 Identity = 71/221 (32.13%), Postives = 98/221 (44.34%), Query Frame = 2
Query: 335 IVATSFDGHQDLLHKYPEWVGINPKLRGLGVAVVHNVDATALDFRVLSELSVAR---------YDHVVFNHPHTGTEDMRRHRSFLGHFFHALVTPIADSGRYEGSGVSNSSTDNEKDRGVAGIHTDGSERHGTSAAVALAPG-GVVHVTLAKDQPERWGLREQAARHGFVLAHR----RLFPADCIEGYMTKRHQTGKSFQR-------RARDSITFSFV 934
+VA+S+D +Q+LL KYPE + I +L+ LG ++H +DAT L R E + +D ++FNHPH G E++RRH+S L HF+ SA L P G +H+TLA QPERW RE+ + G VL P ++ Y KRHQ GKSF R + +DS F F
Sbjct: 56 LVASSYDEYQELLEKYPESIRICTQLQELGADLLHRIDATNL--RATLEACASENGEVQLPTTFDVIIFNHPHCGEENVRRHQSLLSHFY-------------------------------------------ASAKELLHPTRGELHLTLADGQPERWEARERGTKAGLVLVEEIEDVDAHPVYSVD-YERKRHQNGKSFHRVLLHGEKKQQDSTLFIFA 230
BLAST of mRNA_H-paniculata_contig3309.8877.1 vs. uniprot
Match: W7TQ78_9STRA (C2h2 zinc finger protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TQ78_9STRA) HSP 1 Score: 96.7 bits (239), Expect = 2.830e-17 Identity = 81/234 (34.62%), Postives = 101/234 (43.16%), Query Frame = 2
Query: 335 IVATSFDGHQDLLHKYPEWVGINPKLRGLG--VAVVHNVDATAL----------------DFRVLSELSVAR------------YDHVVFNHPHTGTEDMRRHRSFLGHFFHALVTPIADSGRYEGSGVSNSSTDNEKDRGVAGIHTDGSERHGTSAAVALAPGGVVHVTLAKDQPERWGLREQAARHGFVLAH----RRLFPADCIEGYMTKRHQTGKSFQRRARDSITFSFV 934
++ATSFD Q+L KY E +L LG V V++ VDA + FR SV+ +DHV+FNHPHTG ED+ RHR+ L HF + +A S T G+E GG VHVTLA DQ +RW L + AAR GF L H R F D KRHQ+GKSF+ R S T+SF
Sbjct: 39 LLATSFDNPQELHRKYTESHATVTRLEALGARVRVIYGVDALNILETLRRVQMEEGKRADSFREPPHDSVSNCARTADGHPLEVFDHVIFNHPHTGWEDIHRHRALLAHFLESAKAVLACS------------------------TTQGTE------------GGQVHVTLAGDQCKRWKLLQTAARLGFKLRHICDFYRQFGPD-HPPVDIKRHQSGKSFRIRGLPSFTYSFT 235
BLAST of mRNA_H-paniculata_contig3309.8877.1 vs. uniprot
Match: A0A6A3UCE6_9STRA (Uncharacterized protein n=3 Tax=Phytophthora TaxID=4783 RepID=A0A6A3UCE6_9STRA) HSP 1 Score: 95.9 bits (237), Expect = 3.880e-17 Identity = 86/309 (27.83%), Postives = 128/309 (41.42%), Query Frame = 2
Query: 41 PLQRKCQILILGDGNFSFSLALARALLPQPPARRRSSMKTKDISHNNSDTSTQEHASTVGASDSSPGGPLSTNLPLPEDTTGEDKPNRSLHLSSHKFTIVATSFDGHQDLLHKYPEWVGINPKLRGLGVAVVHNVDATAL-DFRVLSELSVARYDHVVFNHPHTGTEDMRRHRSFLGHFFHALVTPIADSGRYEGSGVSNSSTDNEKDRGVAGIHTDGSERHGTSAAVALAPGGVVHVTLAKDQPERWGLREQAARHGFVLAHRRLFPADCIE----GYMTKRHQTGKSF-------QRRARDSITFSF 931
P R+ ++L +GDGNFS+SLALA+ +R S+ G+D P + ATS+D +++L+ KYPE I +L+ LG +V+H VDAT + + V + + ++ VVFNHPH G E++RRH+S L HF+ + + + E SGV +TLA+ QPERW ++A G L HR++ D + Y KRHQ GKSF +R+ + S F F
Sbjct: 30 PEPRRHRVLTVGDGNFSYSLALAK---------QRKSL-------------------------------------------GDDTP---------PLELTATSYDSYEELVAKYPESKRICAQLKELGASVLHRVDATNIRESLVAAGATPDKFHAVVFNHPHCGEENVRRHQSLLSHFYASALEVLEQEEVSEDSGVL--------------------------------------LTLAEGQPERWQAVQRALSAGLKL-HRQIDDVDGDDTFGVAYERKRHQNGKSFHQVTLHGERKKQSSTLFIF 238 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig3309.8877.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig3309.8877.1 >prot_H-paniculata_contig3309.8877.1 ID=prot_H-paniculata_contig3309.8877.1|Name=mRNA_H-paniculata_contig3309.8877.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=717bp MKTKDISHNNSDTSTQEHASTVGASDSSPGGPLSTNLPLPEDTTGEDKPNback to top mRNA from alignment at H-paniculata_contig3309:355..2873+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig3309.8877.1 ID=mRNA_H-paniculata_contig3309.8877.1|Name=mRNA_H-paniculata_contig3309.8877.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=2519bp|location=Sequence derived from alignment at H-paniculata_contig3309:355..2873+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig3309:355..2873+ >mRNA_H-paniculata_contig3309.8877.1 ID=mRNA_H-paniculata_contig3309.8877.1|Name=mRNA_H-paniculata_contig3309.8877.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=4302bp|location=Sequence derived from alignment at H-paniculata_contig3309:355..2873+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |