prot_H-paniculata_contig1138.882.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig1138.882.1
Unique Nameprot_H-paniculata_contig1138.882.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length154
Homology
BLAST of mRNA_H-paniculata_contig1138.882.1 vs. uniprot
Match: A0A6H5JPM1_9PHAE (PfkB domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JPM1_9PHAE)

HSP 1 Score: 116 bits (290), Expect = 6.360e-28
Identity = 61/90 (67.78%), Postives = 67/90 (74.44%), Query Frame = 0
Query:   66 TSTATADAMTDRQDRRGIVVIGLNGALQRTIVFAPPKGLKVGSVNRASSVGAGIGGKGQNVCVALRRLAEEDG-GRGGXXGDVDVTLAHF 154
            + TA     T    RR +VV+GLNGA QRTI+F PPKGL+VG VNRASSVG+GIGGKGQNVCVALR LAE  G    G  GDVDVTLAHF
Sbjct:   31 SGTAVTSHRTSEDYRRSLVVVGLNGAQQRTIIFKPPKGLRVGDVNRASSVGSGIGGKGQNVCVALRTLAEGGGVADDGAQGDVDVTLAHF 120          
BLAST of mRNA_H-paniculata_contig1138.882.1 vs. uniprot
Match: B8C887_THAPS (Uncharacterized protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C887_THAPS)

HSP 1 Score: 57.4 bits (137), Expect = 9.510e-7
Identity = 28/58 (48.28%), Postives = 39/58 (67.24%), Query Frame = 0
Query:   81 RGIVVIGLNGALQRTIVFAPPKGLKVGSVNRASSVGAGIGGKGQNVCVALRRLAEEDG 138
            + +V+IGLN ALQ+  V  P   L+ G+V+RA  V  G+GGKGQ+V VA+  L + DG
Sbjct:   11 QSVVIIGLNAALQKRFVLPPSTNLEPGNVHRAHRVDTGVGGKGQDVGVAMSCLMQSDG 68          
BLAST of mRNA_H-paniculata_contig1138.882.1 vs. uniprot
Match: A0A0L0FLD3_9EUKA (PfkB domain-containing protein n=1 Tax=Sphaeroforma arctica JP610 TaxID=667725 RepID=A0A0L0FLD3_9EUKA)

HSP 1 Score: 55.5 bits (132), Expect = 4.250e-6
Identity = 30/53 (56.60%), Postives = 36/53 (67.92%), Query Frame = 0
Query:   83 IVVIGLNGALQRTIVFAPPKGLKVGSVNRASSVGAGIGGKGQNVCVALRRLAE 135
            I+++GLNGALQRTI       L  G+VNR  SV  GIGGKGQNV VA ++  E
Sbjct:    5 IMIVGLNGALQRTITL---NSLAQGAVNRGQSVKQGIGGKGQNVYVAAKKCQE 54          
BLAST of mRNA_H-paniculata_contig1138.882.1 vs. uniprot
Match: A0A6U0RXL0_9STRA (Hypothetical protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A6U0RXL0_9STRA)

HSP 1 Score: 54.3 bits (129), Expect = 1.170e-5
Identity = 25/54 (46.30%), Postives = 38/54 (70.37%), Query Frame = 0
Query:   84 VVIGLNGALQRTIVFAPPKGLKVGSVNRASSVGAGIGGKGQNVCVALRRLAEED 137
            V++GLN A Q+  + +P   L+ GSV+RA+S+  GIGGKGQ+V +AL  L+  +
Sbjct:   59 VIVGLNAAFQKRFILSPDTSLEPGSVHRAASLEEGIGGKGQDVAIALSCLSSAE 112          
BLAST of mRNA_H-paniculata_contig1138.882.1 vs. uniprot
Match: A0A448ZKW3_9STRA (Uncharacterized protein n=2 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZKW3_9STRA)

HSP 1 Score: 53.5 bits (127), Expect = 2.160e-5
Identity = 28/54 (51.85%), Postives = 37/54 (68.52%), Query Frame = 0
Query:   83 IVVIGLNGALQRTIVFAPPKGLKVGSVNRASSVGAGIGGKGQNVCVALRRLAEE 136
            IVV+GLNGALQ+  V    + L  G+V+RA+ V  G+GGKGQ+V +AL  L  E
Sbjct:   42 IVVVGLNGALQKRFVLPDRQVLVPGNVHRAAGVDFGVGGKGQDVAIALHCLLTE 95          
BLAST of mRNA_H-paniculata_contig1138.882.1 vs. uniprot
Match: A0A7S2L182_9STRA (Hypothetical protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2L182_9STRA)

HSP 1 Score: 52.8 bits (125), Expect = 3.860e-5
Identity = 28/69 (40.58%), Postives = 41/69 (59.42%), Query Frame = 0
Query:   69 ATADAMTDRQDRRGIVVIGLNGALQRTIVFAPPKGLKVGSVNRASSVGAGIGGKGQNVCVALRRLAEED 137
            +T  A T       IVV+GLN ALQ+  +  P   L+ G+V+RA +   G+GGKGQ+V VA+  L  ++
Sbjct:   12 STMSATTTHALSTSIVVVGLNAALQKRFILPPNTNLEPGNVHRAHNSETGVGGKGQDVGVAMSCLMSKE 80          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig1138.882.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
A0A6H5JPM1_9PHAE6.360e-2867.78PfkB domain-containing protein n=2 Tax=Ectocarpus ... [more]
B8C887_THAPS9.510e-748.28Uncharacterized protein n=1 Tax=Thalassiosira pseu... [more]
A0A0L0FLD3_9EUKA4.250e-656.60PfkB domain-containing protein n=1 Tax=Sphaeroform... [more]
A0A6U0RXL0_9STRA1.170e-546.30Hypothetical protein n=1 Tax=Eucampia antarctica T... [more]
A0A448ZKW3_9STRA2.160e-551.85Uncharacterized protein n=2 Tax=Pseudo-nitzschia m... [more]
A0A7S2L182_9STRA3.860e-540.58Hypothetical protein n=1 Tax=Skeletonema marinoi T... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR029056Ribokinase-likeGENE3D3.40.1190.20coord: 80..153
e-value: 1.0E-10
score: 43.2
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 27..154
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..7
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 20..26
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 8..19
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..26
NoneNo IPR availableSIGNALP_EUKSignalP-TMSignalP-TMcoord: 1..26
score: 0.541
NoneNo IPR availableTMHMMTMhelixcoord: 10..32

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig1138contigH-paniculata_contig1138:22672..25937 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig1138.882.1mRNA_H-paniculata_contig1138.882.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig1138 22639..25937 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig1138.882.1 ID=prot_H-paniculata_contig1138.882.1|Name=mRNA_H-paniculata_contig1138.882.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=154bp
MCVRAGKVLLLTALLFVAAPLSPTLAFLLGSLQLSTVKQHKSKTSAFLRS
RASNQHQLAMSQLEVTSTATADAMTDRQDRRGIVVIGLNGALQRTIVFAP
PKGLKVGSVNRASSVGAGIGGKGQNVCVALRRLAEEDGGRGGGGGDVDVT
LAHF
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR029056Ribokinase-like