prot_H-paniculata_contig328.8795.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig328.8795.1
Unique Nameprot_H-paniculata_contig328.8795.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length436
Homology
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BLAST of mRNA_H-paniculata_contig328.8795.1 vs. uniprot
Match: D7FTM9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTM9_ECTSI)

HSP 1 Score: 140 bits (353), Expect = 1.180e-34
Identity = 70/128 (54.69%), Postives = 94/128 (73.44%), Query Frame = 0 
Query:  177 PLGAMFVPEQDKSGVIRLVSEVLCKPGYTAGPQDERRLLRQIRNGRVDLRTMSRMLLWLQRDGAKKELCQRGLKFIGPSANVQPYTTGIGMSWLLQEVASK-HPAGSRIVVCSSSTYDACAGTIAGLL 303
            PLG MF PE DKSGV+ +VSE+LC+PG+T GP DERRL R + +GR+D+  MSR+L WL    A +EL +RG++F+ P A  QPYT+G GM+ L++EV ++ HPAG+  VVC SS +DAC+  I G L
Sbjct:  105 PLGFMFRPELDKSGVVAVVSEILCRPGFTVGPDDERRLKRSVESGRIDVHNMSRLLRWLAGRRAARELSERGIEFVVPRA--QPYTSGQGMTRLMEEVVARGHPAGTNFVVCFSSRFDACSAAIRGRL 230
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig328.8795.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FTM9_ECTSI1.180e-3454.69Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig328contigH-paniculata_contig328:2097..5182 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig328.8795.1mRNA_H-paniculata_contig328.8795.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig328 1418..5462 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig328.8795.1 ID=prot_H-paniculata_contig328.8795.1|Name=mRNA_H-paniculata_contig328.8795.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=436bp
MMRHCTPGTMGSCLNDIPVIHRYKMRHDSIRQTGYRSASKTLILAGERII
YPSQYQLGNLDDFDTSAAIPPHNNRCIDRMGKPALPLPLISPPSPPRENE
RVKESEPILPTSTRISITNSGNENRAAICFAGTASTGNGFNQRPSTRPPP
PPATATANQEQQQQRQNLQQQPHHHHPLGAMFVPEQDKSGVIRLVSEVLC
KPGYTAGPQDERRLLRQIRNGRVDLRTMSRMLLWLQRDGAKKELCQRGLK
FIGPSANVQPYTTGIGMSWLLQEVASKHPAGSRIVVCSSSTYDACAGTIA
GLLTDTTTTSPDTPPAMPSISTSSSFDSRSTILRATEASQRGESAVKING
RTGVGGSGTKIRATVALLFDKKPGHRCLDDASRDGSRSDSVKSWYSDGDS
SEGISMMGVGEWVEAYGECDGPMLAAWVFQGSGVK*
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