mRNA_H-paniculata_contig11366.877.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
Overview
Homology
BLAST of mRNA_H-paniculata_contig11366.877.1 vs. uniprot
Match: D7FWG9_ECTSI (Putative methylene tetrahydrofolate dehydrogenase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FWG9_ECTSI) HSP 1 Score: 140 bits (353), Expect = 6.770e-34 Identity = 68/78 (87.18%), Postives = 73/78 (93.59%), Query Frame = 2 Query: 452 VQGVPSKDYKLSASWLKEGCAVINVSTFKNVDEEEVLKVPGVRYVPMVGKVTVSMLERNLLRLHENFGEEMAAEALAK 685 V GVPSK YKLSASWLKEG A+INVSTFKNVDEE+VLK+PGVRYVPMVGKVTV+MLERNLLRLHENFGE+MAAE L K Sbjct: 248 VTGVPSKAYKLSASWLKEGSAIINVSTFKNVDEEDVLKIPGVRYVPMVGKVTVAMLERNLLRLHENFGEDMAAETLVK 325
BLAST of mRNA_H-paniculata_contig11366.877.1 vs. uniprot
Match: A0A7S0UAU4_HEMAN (Hypothetical protein n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S0UAU4_HEMAN) HSP 1 Score: 101 bits (252), Expect = 3.600e-22 Identity = 49/86 (56.98%), Postives = 63/86 (73.26%), Query Frame = 2 Query: 407 TYCPLSPYGHVRGRSV--QGVPSKDYKLSASWLKEGCAVINVSTFKNVDEEEVLKVPGVRYVPMVGKVTVSMLERNLLRLHENFGE 658 T C +S V+ + GVP+KDY+L SW+ V+NVS FKNVDE E+LK+PGV+YVP+VGKVTV+MLERNL+RL ENF + Sbjct: 35 TDCKMSTEECVKAADIIITGVPTKDYRLDTSWIAPNTVVMNVSHFKNVDEAELLKIPGVKYVPLVGKVTVAMLERNLIRLIENFAQ 120
BLAST of mRNA_H-paniculata_contig11366.877.1 vs. uniprot
Match: A0A835ZC74_9STRA (Putative methylene tetrahydrofolate dehydrogenase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZC74_9STRA) HSP 1 Score: 106 bits (264), Expect = 1.090e-21 Identity = 49/67 (73.13%), Postives = 58/67 (86.57%), Query Frame = 2 Query: 452 VQGVPSKDYKLSASWLKEGCAVINVSTFKNVDEEEVLKVPGVRYVPMVGKVTVSMLERNLLRLHENF 652 + GVPS+DYKL W++ G V+NVSTFKNV EEE+L+VPGV+YVPMVGKVTV+MLERNLLRLH NF Sbjct: 252 ICGVPSRDYKLVTEWVQPGTVVVNVSTFKNVHEEELLQVPGVKYVPMVGKVTVAMLERNLLRLHGNF 318
BLAST of mRNA_H-paniculata_contig11366.877.1 vs. uniprot
Match: A0A024GSQ7_9STRA (Uncharacterized protein n=2 Tax=Albugo candida TaxID=65357 RepID=A0A024GSQ7_9STRA) HSP 1 Score: 100 bits (249), Expect = 7.820e-20 Identity = 45/67 (67.16%), Postives = 56/67 (83.58%), Query Frame = 2 Query: 452 VQGVPSKDYKLSASWLKEGCAVINVSTFKNVDEEEVLKVPGVRYVPMVGKVTVSMLERNLLRLHENF 652 + GVP KDYKL W+ E VINVS++KNVDE +LK+PGV+YVP+VGKVTV+ML+RNLLRL+ENF Sbjct: 239 ITGVPVKDYKLPLDWVAENTVVINVSSYKNVDEANLLKIPGVKYVPLVGKVTVAMLQRNLLRLYENF 305
BLAST of mRNA_H-paniculata_contig11366.877.1 vs. uniprot
Match: A0A8J9SKN0_PHATR (Hypothetical protein (Fragment) n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=A0A8J9SKN0_PHATR) HSP 1 Score: 93.2 bits (230), Expect = 8.850e-20 Identity = 41/64 (64.06%), Postives = 54/64 (84.38%), Query Frame = 2 Query: 452 VQGVPSKDYKLSASWLKEGCAVINVSTFKNVDEEEVLKVPGVRYVPMVGKVTVSMLERNLLRLH 643 + GVP+K Y+L W++E V+NVS+FKNVDEE +LK+PGV YVP+VGKVTV+MLERNL+RL+ Sbjct: 5 ITGVPTKSYRLPTEWIQEHTTVVNVSSFKNVDEEALLKIPGVVYVPLVGKVTVAMLERNLMRLY 68
BLAST of mRNA_H-paniculata_contig11366.877.1 vs. uniprot
Match: A0A662WV56_9STRA (Uncharacterized protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662WV56_9STRA) HSP 1 Score: 101 bits (251), Expect = 1.140e-19 Identity = 46/67 (68.66%), Postives = 56/67 (83.58%), Query Frame = 2 Query: 452 VQGVPSKDYKLSASWLKEGCAVINVSTFKNVDEEEVLKVPGVRYVPMVGKVTVSMLERNLLRLHENF 652 + GVP K YKL W+ E VINV++FKNVDE E+LK+PGV+YVP+VGKVTV+MLERNLLRL+ENF Sbjct: 310 ITGVPVKSYKLPLEWVSENTVVINVASFKNVDEAELLKIPGVQYVPLVGKVTVAMLERNLLRLYENF 376
BLAST of mRNA_H-paniculata_contig11366.877.1 vs. uniprot
Match: K3WD34_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WD34_GLOUD) HSP 1 Score: 98.6 bits (244), Expect = 1.180e-19 Identity = 44/67 (65.67%), Postives = 56/67 (83.58%), Query Frame = 2 Query: 452 VQGVPSKDYKLSASWLKEGCAVINVSTFKNVDEEEVLKVPGVRYVPMVGKVTVSMLERNLLRLHENF 652 + GVP K YKL W+ E VINV++FKNVDEE +L++PGV+YVP+VGKVTV+ML+RNLLRL+ENF Sbjct: 177 ITGVPVKSYKLPLEWVSENTVVINVASFKNVDEEALLQIPGVQYVPLVGKVTVAMLQRNLLRLYENF 243
BLAST of mRNA_H-paniculata_contig11366.877.1 vs. uniprot
Match: A0A7S3LJ10_9STRA (Hypothetical protein n=1 Tax=Aplanochytrium stocchinoi TaxID=215587 RepID=A0A7S3LJ10_9STRA) HSP 1 Score: 100 bits (248), Expect = 1.340e-19 Identity = 43/67 (64.18%), Postives = 58/67 (86.57%), Query Frame = 2 Query: 452 VQGVPSKDYKLSASWLKEGCAVINVSTFKNVDEEEVLKVPGVRYVPMVGKVTVSMLERNLLRLHENF 652 V GVP+K +KL+ W++ G V+NVS FKNVDE+E+LK+PGV+Y+P++GKVTV+MLERNL+RL ENF Sbjct: 245 VTGVPTKSFKLNVDWVQPGTVVVNVSHFKNVDEKELLKIPGVKYIPLIGKVTVAMLERNLIRLVENF 311
BLAST of mRNA_H-paniculata_contig11366.877.1 vs. uniprot
Match: A0A2D4C1C3_PYTIN (Methylenetetrahydrofolate dehydrogenase n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4C1C3_PYTIN) HSP 1 Score: 94.7 bits (234), Expect = 2.310e-19 Identity = 41/67 (61.19%), Postives = 55/67 (82.09%), Query Frame = 2 Query: 452 VQGVPSKDYKLSASWLKEGCAVINVSTFKNVDEEEVLKVPGVRYVPMVGKVTVSMLERNLLRLHENF 652 + GVP K YKL W+ V+NV++FKNVDE+ +L++PGV+YVP+VGKVTV+ML+RNLLRL+ENF Sbjct: 73 ITGVPVKSYKLPLDWVSPNTVVVNVASFKNVDEDALLQIPGVQYVPLVGKVTVAMLQRNLLRLYENF 139
BLAST of mRNA_H-paniculata_contig11366.877.1 vs. uniprot
Match: A0A7S2A9W0_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2A9W0_TRICV) HSP 1 Score: 100 bits (249), Expect = 3.030e-19 Identity = 49/79 (62.03%), Postives = 61/79 (77.22%), Query Frame = 2 Query: 422 SPYGHVRGRSV--QGVPSKDYKLSASWLKEGCAVINVSTFKNVDEEEVLKVPGVRYVPMVGKVTVSMLERNLLRLHENF 652 +P VR SV GVP+K Y+L W++ V+NV++FKNVDEE +LKVPGV YVPMVGKVTV+MLERNL+RL+ENF Sbjct: 279 TPESCVRKSSVVVTGVPTKSYRLPTEWIQPNTTVVNVASFKNVDEESLLKVPGVTYVPMVGKVTVAMLERNLVRLYENF 357 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig11366.877.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig11366.877.1 >prot_H-paniculata_contig11366.877.1 ID=prot_H-paniculata_contig11366.877.1|Name=mRNA_H-paniculata_contig11366.877.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=100bp MCQCSRTYCPLSPYGHVRGRSVQGVPSKDYKLSASWLKEGCAVINVSTFKback to top mRNA from alignment at H-paniculata_contig11366:606..4580+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig11366.877.1 ID=mRNA_H-paniculata_contig11366.877.1|Name=mRNA_H-paniculata_contig11366.877.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=3975bp|location=Sequence derived from alignment at H-paniculata_contig11366:606..4580+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig11366:606..4580+ >mRNA_H-paniculata_contig11366.877.1 ID=mRNA_H-paniculata_contig11366.877.1|Name=mRNA_H-paniculata_contig11366.877.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=600bp|location=Sequence derived from alignment at H-paniculata_contig11366:606..4580+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |