mRNA_H-paniculata_contig3241.8725.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig3241.8725.1
Unique NamemRNA_H-paniculata_contig3241.8725.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
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BLAST of mRNA_H-paniculata_contig3241.8725.1 vs. uniprot
Match: D7G2K7_ECTSI (Glutathione S-transferase kappa n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G2K7_ECTSI)

HSP 1 Score: 130 bits (328), Expect = 4.150e-36
Identity = 63/85 (74.12%), Postives = 71/85 (83.53%), Query Frame = 1 
Query:    1 SPYSWIAFETLMRYRCM--WNAEISLRPFFLGGVMKETGNKPPATLKAKRLYMMEDLQRMARYHGVPLVPLKDKDAMYSTLGAQR 249
            SPYSW+AFETLMRYR +  W+A+I+LRPFFLGG+MK TGNKPPATLKAK  YM  DL RMA+YHG PLVPLKD  AM+ TL AQR
Sbjct:   31 SPYSWLAFETLMRYRDLGVWDADITLRPFFLGGIMKATGNKPPATLKAKGKYMKGDLARMAKYHGAPLVPLKDPRAMFETLAAQR 115
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BLAST of mRNA_H-paniculata_contig3241.8725.1 vs. uniprot
Match: A0A3M6TD96_POCDA (DSBA domain-containing protein n=1 Tax=Pocillopora damicornis TaxID=46731 RepID=A0A3M6TD96_POCDA)

HSP 1 Score: 100 bits (249), Expect = 1.740e-25
Identity = 41/68 (60.29%), Postives = 54/68 (79.41%), Query Frame = 1 
Query:    1 SPYSWIAFETLMRYRCMWNAEISLRPFFLGGVMKETGNKPPATLKAKRLYMMEDLQRMARYHGVPLVP 204
            SPYSWIAFE L RYR  WN ++  RPFFLGG+M  +GN+PPA + AK +YMM+D+QRM  Y+G+P++P
Sbjct:   16 SPYSWIAFEVLCRYRPKWNLDLQFRPFFLGGIMAGSGNRPPAMVPAKGVYMMKDIQRMQEYYGIPIIP 83
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BLAST of mRNA_H-paniculata_contig3241.8725.1 vs. uniprot
Match: A0A6P8HHN1_ACTTE (Glutathione S-transferase kappa n=1 Tax=Actinia tenebrosa TaxID=6105 RepID=A0A6P8HHN1_ACTTE)

HSP 1 Score: 102 bits (254), Expect = 3.310e-25
Identity = 44/71 (61.97%), Postives = 52/71 (73.24%), Query Frame = 1 
Query:    1 SPYSWIAFETLMRYRCMWNAEISLRPFFLGGVMKETGNKPPATLKAKRLYMMEDLQRMARYHGVPLVPLKD 213
            SPYSW+AFE L RYR +WN ++  RPFFL GVM  TGNKPP  + AK LYM  DL+R   Y+G+PL PLKD
Sbjct:   16 SPYSWVAFEVLCRYRPVWNLDLQFRPFFLSGVMSATGNKPPGVIPAKMLYMATDLKRCREYYGIPLAPLKD 86
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BLAST of mRNA_H-paniculata_contig3241.8725.1 vs. uniprot
Match: UPI000F552778 (glutathione S-transferase kappa 1-like n=1 Tax=Pocillopora damicornis TaxID=46731 RepID=UPI000F552778)

HSP 1 Score: 100 bits (249), Expect = 6.380e-25
Identity = 41/68 (60.29%), Postives = 54/68 (79.41%), Query Frame = 1 
Query:    1 SPYSWIAFETLMRYRCMWNAEISLRPFFLGGVMKETGNKPPATLKAKRLYMMEDLQRMARYHGVPLVP 204
            SPYSWIAFE L RYR  WN ++  RPFFLGG+M  +GN+PPA + AK +YMM+D+QRM  Y+G+P++P
Sbjct:   16 SPYSWIAFEVLCRYRPKWNLDLQFRPFFLGGIMAGSGNRPPAMVPAKGVYMMKDIQRMQEYYGIPIIP 83
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BLAST of mRNA_H-paniculata_contig3241.8725.1 vs. uniprot
Match: A0A896IH59_CRAHO (Glutathione S-transferase kappa n=4 Tax=Crassostrea TaxID=6564 RepID=A0A896IH59_CRAHO)

HSP 1 Score: 99.8 bits (247), Expect = 3.610e-24
Identity = 47/85 (55.29%), Postives = 62/85 (72.94%), Query Frame = 1 
Query:    1 SPYSWIAFETLMRYRCMW-NAEISLRPFFLGGVMKETGNKPPATLKAKRLYMMEDLQRMARYHGVPLVPLKD-KDAMYSTLGAQR 249
            SPY+WI FE L RYR  W N ++ L+PFFLGGVMKE+GNKPPA +  K +YM++D+QR+ +Y+G+PL   KD    M+ TL  QR
Sbjct:   17 SPYTWIGFEVLCRYRTKWPNMDLQLKPFFLGGVMKESGNKPPAMVPNKGVYMIKDIQRLGKYYGIPLNQPKDFGSVMFGTLPVQR 101
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BLAST of mRNA_H-paniculata_contig3241.8725.1 vs. uniprot
Match: A0A6U1M772_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A6U1M772_9STRA)

HSP 1 Score: 97.4 bits (241), Expect = 4.500e-24
Identity = 49/84 (58.33%), Postives = 61/84 (72.62%), Query Frame = 1 
Query:    1 SPYSWIAFETLMRYRCMWNAEISLRPFFLGGVMKETGNKPPATLKAKRLYMMEDLQRMARYHGVPLVPLKD-KDAMYSTLGAQR 249
            SPYSW+AFE L RY+ +W+A    +PFFLGGVMK TGN+PPAT+ AK  +   DLQRMA Y  VPLV  KD + A+ ++L AQR
Sbjct:   26 SPYSWLAFEALTRYQQIWDANFEFKPFFLGGVMKTTGNRPPATVPAKGAHGTIDLQRMAEYFDVPLVQPKDFQRAIMTSLPAQR 109
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BLAST of mRNA_H-paniculata_contig3241.8725.1 vs. uniprot
Match: UPI000C6DD91B (glutathione S-transferase kappa 1-like n=1 Tax=Centruroides sculpturatus TaxID=218467 RepID=UPI000C6DD91B)

HSP 1 Score: 95.9 bits (237), Expect = 1.060e-22
Identity = 45/84 (53.57%), Postives = 58/84 (69.05%), Query Frame = 1 
Query:    1 SPYSWIAFETLMRYRCMWNAEISLRPFFLGGVMKETGNKPPATLKAKRLYMMEDLQRMARYHGVPL-VPLKDKDAMYSTLGAQR 249
            SPYSWIAFE L RY+  W  ++  RPFFLG +MKE+GN PPA +  K LYM EDL+R+A Y  +P+ +P    + M +TLG QR
Sbjct:   16 SPYSWIAFEVLCRYKVKWGLDLQWRPFFLGAIMKESGNNPPAFVANKALYMREDLKRLADYTKIPVCIPENFSEIMRNTLGTQR 99
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BLAST of mRNA_H-paniculata_contig3241.8725.1 vs. uniprot
Match: A0A7L2RGZ0_9PASS (GSTK1 transferase (Fragment) n=1 Tax=Neodrepanis coruscans TaxID=254563 RepID=A0A7L2RGZ0_9PASS)

HSP 1 Score: 92.0 bits (227), Expect = 3.480e-22
Identity = 39/71 (54.93%), Postives = 55/71 (77.46%), Query Frame = 1 
Query:    1 SPYSWIAFETLMRYRCMWNAEISLRPFFLGGVMKETGNKPPATLKAKRLYMMEDLQRMARYHGVPLVPLKD 213
            SPYSW+ FE L RY+ +WN ++ LRP FLGG+M++TGNKPPA L  +  YM++D++RMA+Y+ VPL   +D
Sbjct:   16 SPYSWLGFEALCRYQHIWNIDLHLRPAFLGGIMQQTGNKPPAMLPKRGEYMLKDVKRMAKYYQVPLEIFRD 86
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BLAST of mRNA_H-paniculata_contig3241.8725.1 vs. uniprot
Match: UPI001EE070C1 (glutathione S-transferase kappa 1-like isoform X2 n=2 Tax=Daphnia TaxID=6668 RepID=UPI001EE070C1)

HSP 1 Score: 94.0 bits (232), Expect = 4.150e-22
Identity = 47/86 (54.65%), Postives = 57/86 (66.28%), Query Frame = 1 
Query:    1 SPYSWIAFETLMRYRCMWNAEISLRPFFLGGVMKETGNKPPATLKAKRLYMMEDLQRMARYHGVPLVPLKDKDAMY---STLGAQR 249
            SPYSW  FE L RYR  W  ++ LRPFFLGGVMKETGN+PP  + +K LYM +DL R A Y G+PL  ++D   +     TL AQR
Sbjct:   17 SPYSWFGFEALCRYRSHWKMDLVLRPFFLGGVMKETGNRPPMMVPSKGLYMQKDLLRNAAYFGIPLKLIEDPFNVMIEKGTLRAQR 102
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BLAST of mRNA_H-paniculata_contig3241.8725.1 vs. uniprot
Match: A0A7M7JS53_VARDE (Glutathione S-transferase kappa n=1 Tax=Varroa destructor TaxID=109461 RepID=A0A7M7JS53_VARDE)

HSP 1 Score: 94.0 bits (232), Expect = 6.270e-22
Identity = 45/86 (52.33%), Postives = 65/86 (75.58%), Query Frame = 1 
Query:    1 SPYSWIAFETLMRYRCMWNAEISLRPFFLGGVMKETGNKPPATLKAKRLYMMEDLQRMARYHGVPL-VPLKDKDAMYS--TLGAQR 249
            SP+S++ FE L RYR +WN E++L+PFFLGG+M+ETGN PPA +  + LYMM+DL R++RY+ VPL +P +  + + S  T+ AQR
Sbjct:   16 SPFSYLCFEALCRYRRLWNMELALKPFFLGGIMRETGNMPPAMVPNRGLYMMKDLSRLSRYYQVPLKIPQEFMEWIVSSSTVNAQR 101
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig3241.8725.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G2K7_ECTSI4.150e-3674.12Glutathione S-transferase kappa n=2 Tax=Ectocarpus... [more]
A0A3M6TD96_POCDA1.740e-2560.29DSBA domain-containing protein n=1 Tax=Pocillopora... [more]
A0A6P8HHN1_ACTTE3.310e-2561.97Glutathione S-transferase kappa n=1 Tax=Actinia te... [more]
UPI000F5527786.380e-2560.29glutathione S-transferase kappa 1-like n=1 Tax=Poc... [more]
A0A896IH59_CRAHO3.610e-2455.29Glutathione S-transferase kappa n=4 Tax=Crassostre... [more]
A0A6U1M772_9STRA4.500e-2458.33Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa... [more]
UPI000C6DD91B1.060e-2253.57glutathione S-transferase kappa 1-like n=1 Tax=Cen... [more]
A0A7L2RGZ0_9PASS3.480e-2254.93GSTK1 transferase (Fragment) n=1 Tax=Neodrepanis c... [more]
UPI001EE070C14.150e-2254.65glutathione S-transferase kappa 1-like isoform X2 ... [more]
A0A7M7JS53_VARDE6.270e-2252.33Glutathione S-transferase kappa n=1 Tax=Varroa des... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig3241contigH-paniculata_contig3241:16909..18429 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeMetazoa
Seed ortholog score93.6
Seed ortholog evalue4.7e-17
Seed eggNOG ortholog59894.ENSFALP00000004678
Preferred nameGSTK1
KEGG rclassRC00004,RC00069,RC00840,RC00948,RC01704,RC01705,RC01706,RC01758,RC01759,RC01765,RC01767,RC01769,RC02243,RC02527,RC02939,RC02940,RC02942,RC02943,RC02944
KEGG koko:K13299
KEGG ReactionR03522,R07002,R07003,R07004,R07023,R07024,R07025,R07026,R07069,R07070,R07083,R07084,R07091,R07092,R07093,R07094,R07100,R07113,R07116,R08280,R09409
KEGG Pathwayko00480,ko00980,ko00982,ko04146,ko05204,map00480,map00980,map00982,map04146,map05204
Hectar predicted targeting categoryother localisation
GOsGO:0003674,GO:0003824,GO:0004364,GO:0004601,GO:0004602,GO:0005102,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005759,GO:0005777,GO:0005782,GO:0005829,GO:0006518,GO:0006575,GO:0006605,GO:0006625,GO:0006749,GO:0006790,GO:0006807,GO:0006810,GO:0006886,GO:0006996,GO:0007031,GO:0008104,GO:0008150,GO:0008152,GO:0009058,GO:0009636,GO:0009888,GO:0009987,GO:0015031,GO:0015833,GO:0016043,GO:0016209,GO:0016491,GO:0016684,GO:0016740,GO:0016765,GO:0030154,GO:0030855,GO:0031907,GO:0031974,GO:0032502,GO:0033036,GO:0033365,GO:0034613,GO:0034641,GO:0042221,GO:0042579,GO:0042886,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043574,GO:0043603,GO:0044237,GO:0044249,GO:0044272,GO:0044422,GO:0044424,GO:0044429,GO:0044438,GO:0044439,GO:0044444,GO:0044446,GO:0044464,GO:0045184,GO:0046907,GO:0048856,GO:0048869,GO:0050896,GO:0051179,GO:0051186,GO:0051234,GO:0051641,GO:0051649,GO:0051716,GO:0055114,GO:0060429,GO:0070013,GO:0070727,GO:0070887,GO:0071702,GO:0071704,GO:0071705,GO:0071840,GO:0072594,GO:0072662,GO:0072663,GO:0097237,GO:0098754,GO:0098869,GO:1901564,GO:1901566,GO:1901576,GO:1901685,GO:1901687,GO:1990748
EggNOG free text desc.glutathione S-transferase kappa 1
EggNOG OGs2R0HS@2759,38GKE@33154,3BAAT@33208,3D26Q@33213,489IY@7711,48YQ5@7742,4GHDB@8782,COG3917@1
EC2.5.1.18
COG Functional cat.G
Best tax levelAves
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000
Exons2
Model size249
Cds size249
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930001.8523588-CDS-H-paniculata_contig3241:16908..170181622930001.8523588-CDS-H-paniculata_contig3241:16908..17018Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig3241 16909..17018 +
1691481105.2920814-CDS-H-paniculata_contig3241:16908..170181691481105.2920814-CDS-H-paniculata_contig3241:16908..17018Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig3241 16909..17018 +
1622930001.8646832-CDS-H-paniculata_contig3241:18290..184291622930001.8646832-CDS-H-paniculata_contig3241:18290..18429Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig3241 18291..18429 +
1691481105.311089-CDS-H-paniculata_contig3241:18290..184291691481105.311089-CDS-H-paniculata_contig3241:18290..18429Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig3241 18291..18429 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig3241.8725.1prot_H-paniculata_contig3241.8725.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig3241 16909..18429 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig3241.8725.1

>prot_H-paniculata_contig3241.8725.1 ID=prot_H-paniculata_contig3241.8725.1|Name=mRNA_H-paniculata_contig3241.8725.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=83bp
SPYSWIAFETLMRYRCMWNAEISLRPFFLGGVMKETGNKPPATLKAKRLY
MMEDLQRMARYHGVPLVPLKDKDAMYSTLGAQR
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mRNA from alignment at H-paniculata_contig3241:16909..18429+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig3241.8725.1 ID=mRNA_H-paniculata_contig3241.8725.1|Name=mRNA_H-paniculata_contig3241.8725.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=1521bp|location=Sequence derived from alignment at H-paniculata_contig3241:16909..18429+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
AGCCCGTACAGCTGGATCGCTTTCGAGACCCTCATGAGGTACCGGTGCAT
GTGGAACGCCGAGATCAGCCTGCGCCCTTTCTTCTTGGGTGGTGTGATGA
AAGAAACCGGGTGAGTACAGAGTACAACAACAACAACAACAACAACAACA
ACAACAACAACAACAGAGTTTTTCATTATAGGGATTGGTGCGTTTACCCC
TTCACAGCCAGTCAGTGCGTATTGCTGTGAGGCGAGATAGTTTTTCTTGG
TTTATTGCGCGCGCAACGCCCGTACTCTTTTAATAGAGAAATCATATTTT
CTTTCCCTTATGATGTAATTTTCTTGGTAAGTCTATACAGCTGCAGATTA
AGGTTACCTAGCTGCATTTTACATATCCGTTCCCCACCTTCCTACCCCCC
CCCAAAAAAAACCCGAACAATGTTAGAGGTGGTTGCGAAAACAAATATCT
GTTTGTAAACATTTAATTTCGACTTGGGGCCCTGTATGGCTCATAGTTCA
TAAGTGAGCTGCAGCAGTCTTGGACCACAGTCCACCCGCACCAAAGTCTC
GCTGCAAAACGAATTCCTTTTCGCAACCCGTCACATTTCGTAGAATCCGC
GGAAATTTCCGAAATTTGAGAAGGAATTTGTTTCGTATTGTGAAGGTGGT
ACACGGGTGGACTGCGTTTCGGGACCTGGAGCTCATTCACTGTCAGCCAT
ACAGGACCAAATCGAAATTCATAAAGTGATGCTTGTTGTCGCACTCTACG
TTACGAGTGGTCTAGAAAATAATCAGACATCATTGTATTCTTTGCTGACT
GTCTGTGGGAGAAGAGAGGTGGATAAAAAAAACTGGTTGATGACTCGGTT
TTAATTGTTTCCGCATTTTAGTTCTAGGTCTCTTCTTTTCGAATGTCGAA
AGGCGAATATAATATTTAGCTCTATCAAACACTTGTTTTGTAAAGAGGTC
CTTCGGTCGAGGGTGCAAATTTCGATGATGTACCTCTGTGTCCGTGTGTT
GACACGCATATTTTGTTATTTGCTCTCATATTTGTTTCTTTTTATTGGCG
CTGCAATGAATTTTGTTGCCCTGAAAGAAGATATGAAGCACTTACAACTC
TGTAAAGCACGCCTTTCACGCTCCCTCCTGTAACTGTAACTGTAGCTATA
ACTGCAATTATAACTGTAACTGTAACTGTAACTATAACTATAACTTTATT
TGTAACAGTAATTATAACTGTATCTATAAATGTAGTTATAACTGTATCTA
TAATTGTATCTATAATTGTATCTATAATTGTATCTATAACTGTAACTATG
ACTGAACCTATACCGTCAATGACACTCTCTCTCTCCCTGCGTGTCCTGTT
CATTCTGTTGCCAAACTTGTTTCCACCCCCAGAAATAAACCCCCTGCCAC
GTTAAAGGCTAAGAGACTGTACATGATGGAGGATCTCCAACGCATGGCGA
GATACCACGGGGTGCCCCTGGTACCTCTCAAGGACAAAGATGCAATGTAC
AGCACGCTCGGCGCTCAGAGG
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Coding sequence (CDS) from alignment at H-paniculata_contig3241:16909..18429+

>mRNA_H-paniculata_contig3241.8725.1 ID=mRNA_H-paniculata_contig3241.8725.1|Name=mRNA_H-paniculata_contig3241.8725.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=498bp|location=Sequence derived from alignment at H-paniculata_contig3241:16909..18429+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
AGCCCGTACAGCTGGATCGCTTTCGAGACCCTCATGAGGTACCGGTGCAT
GTGGAACGCCGAGATCAGCCTGCGCCCTTTCTTCTTGGGTGGTGTGATGA
AAGAAACCGGAGCCCGTACAGCTGGATCGCTTTCGAGACCCTCATGAGGT
ACCGGTGCATGTGGAACGCCGAGATCAGCCTGCGCCCTTTCTTCTTGGGT
GGTGTGATGAAAGAAACCGGAAATAAACCCCCTGCCACGTTAAAGGCTAA
GAGACTGTACATGATGGAGGATCTCCAACGCATGGCGAGATACCACGGGG
TGCCCCTGGTACCTCTCAAGGACAAAGATGCAATGTACAGCACGCTCGGC
GCTCAGAGGAAATAAACCCCCTGCCACGTTAAAGGCTAAGAGACTGTACA
TGATGGAGGATCTCCAACGCATGGCGAGATACCACGGGGTGCCCCTGGTA
CCTCTCAAGGACAAAGATGCAATGTACAGCACGCTCGGCGCTCAGAGG
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