prot_H-paniculata_contig3220.8672.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig3220.8672.1
Unique Nameprot_H-paniculata_contig3220.8672.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length519
Homology
BLAST of mRNA_H-paniculata_contig3220.8672.1 vs. uniprot
Match: A0A6H5JW68_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JW68_9PHAE)

HSP 1 Score: 293 bits (749), Expect = 1.660e-92
Identity = 138/274 (50.36%), Postives = 183/274 (66.79%), Query Frame = 0
Query:  238 WDRLVVSVHQSTGARYLLSLGSWDELKRRNVRNVLETFRSNFHQLPRPGYGMIPECAFDPERLNFGIHVRLGDRVKANPDRHNEYFNKLKAFMDTVTKIVVEKGWDAPLFHVFSETLEPCPHPATGYFDEFPIWPVEMDQIAQCLRAETPEDCLEKRAGLEFCLPNRPGVFHVQEKNIVLHLGDNVKKTMSCMIHADGLLMGCSTFGQVAGVLSKGLKFFSMACFGTQTPPQYKTIPPFAVSEGGDMWVPVKGSWHDPALWSEVIFKKELNKLL 511
            W++ ++ ++  T  RY  ++GSW+  KR  VR VL TF+ +FH  PRP   + PECAF   +L+  IHVRLGDR  +  D  + YF+ L+ FM+TV    + +G D P+FH+FSET   CP    G F+EFP WPVEMDQ++ C+ A TPE+C EK AG   C P R G+F V  + + LH+G +V+  +SCM +A+G+LMGCSTFGQVAGVLSKG++FFS  C G +T  QYK IPP A++  G MWVPV GSWHDP + SE I    L+ LL
Sbjct:   15 WNQWLLMMNLMTAPRYFSAVGSWNARKREAVRTVLHTFKQSFHTFPRPWNNIQPECAFSQSKLDIAIHVRLGDRKDSLND--DSYFDYLEDFMETVASAAIARGQDHPVFHIFSETHSRCPSAENGAFEEFPKWPVEMDQVSTCMEATTPEECPEKDAGAPSCNPTRSGIFAVDGREMNLHVGLDVQNDLSCMANANGVLMGCSTFGQVAGVLSKGIRFFSTECAGWRTTIQYKLIPPMAIAGRGHMWVPVSGSWHDPVIASESILGASLDLLL 286          
BLAST of mRNA_H-paniculata_contig3220.8672.1 vs. uniprot
Match: D7FRT1_ECTSI (Long-chain acyl-CoA synthetase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRT1_ECTSI)

HSP 1 Score: 301 bits (772), Expect = 2.120e-86
Identity = 177/407 (43.49%), Postives = 233/407 (57.25%), Query Frame = 0
Query:  117 IRTLSNWVLAEEIGCDLVSPT-WGRSVQGT-NGTVLYCHEKTPEANEKIDQSMGVDYFAN-NSDSREMS---CAVVNWLQFFRFDIVGRETVPVNGSIKFVEP-REKPADATRGLGGLGSPNRLGDRMWDRLVVSVHQS-TGARYLLSLGSWDELKRRNVRNVLETFRSNFHQLPRPGYGMIPECAFDPERLNFGIHVRLGDRVKANPDRHNEYFNKLKAFMDTVTKIVVEKGWDAPLFHVFSETLEPCPHPATGYFDEFPIWPVEMDQIAQCLRAETPEDCLEKRAGLEFCLPNRPGVFHVQEKNIVLHLGDNVKKTMSCMIHADGLLMGCSTFGQVAGVLS-KGLKFFSMACFGTQTPPQYKTIPPFAVSEGGDMWVPVKGSWHDPALWSEVIFKKELNKLLLTK 514
            +R L+  + AEE+GCD ++P+ WG  V G  +G  +YCH     A    +Q  G   F N   D  E+    C+VVNW ++F  +    E +P N + + VE    +  D    L    + N   +  WDRL + + Q    + +L SLGSWD  KR  VR VL  FR NFHQ PRP Y   PEC ++   LNF +HVR+GDR +       EYF+ L+ FM TVT+ VVE+   AP+FHVFSE L PCP P    F EFP WPVE DQ++ C R    +D             +RP  F V+ + ++LHLG N  + +SCM+HADGLLMGCSTFGQ+AGVL+  G+ FFS  C G   P Q K IPP AV+E G MWVP+ GSW DP L ++ +F   L++LL  K
Sbjct:    3 MRHLAAKIFAEEVGCDWLTPSQWGMPVAGDGSGASVYCHS----AATYDEQRRG---FGNATKDEAEIMVHRCSVVNWPEYFNLNASSVE-LPANCTFRVVEADTSRNHDLEMALKETDA-NGFDNLGWDRLKIVLRQPHASSNFLASLGSWDGWKREVVRKVLRQFRENFHQSPRPWYNDEPECGYEESELNFALHVRMGDRRELEGVTP-EYFSLLEGFMATVTQAVVEREQAAPMFHVFSEALYPCPFPENATFTEFPFWPVERDQVSVCPRNAAEQDGPA----------SRPDTFRVEGRPVLLHLGRNAAEALSCMVHADGLLMGCSTFGQLAGVLNGDGISFFSTECGGHGAPLQSKMIPPLAVAERGRMWVPIAGSWRDPVLRAKHVFSAVLDELLKRK 389          
BLAST of mRNA_H-paniculata_contig3220.8672.1 vs. uniprot
Match: D7G5J8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5J8_ECTSI)

HSP 1 Score: 248 bits (634), Expect = 1.860e-76
Identity = 116/208 (55.77%), Postives = 151/208 (72.60%), Query Frame = 0
Query:  308 LGDRVKANPDRHNEYFNKLKAFMDTVTKIVVEKGWDAPLFHVFSETLEPCPHPATGYFDEFPIWPVEMDQIAQCLRAETPEDCLEKRAGLEFCLPNRPGVFHVQEKNIVLHLGDNVKKTMSCMIHADGLLMGCSTFGQVAGVLSKGLKFFSMACFGTQTPPQYKTIPPFAVSEGGDMWVPVKGSWHDPALWSEVIFKKELNKLLLTKS 515
            +GDR +A  D   +YF+ ++  M+TV     E+G   PLFHVFSETL PCP   TG FDEFPIWPVE+D+I +CL A TP DC EK+AG  FC P R G+F +++K+IVLH+G +V+  MSCMI ADG+LMGCSTFGQ+AG+L++G+  FS  C G  TP QY++IPP A++E G +WVP++GSWHDP L S  IF   L+ LL+ KS
Sbjct:    1 MGDR-RAFYDGSLQYFHNVELIMETVADEFRERGLPEPLFHVFSETLSPCPSTVTGLFDEFPIWPVELDKIEECLAAATPIDCPEKQAGT-FCTPKRAGIFRIRDKSIVLHVGSDVQNEMSCMIQADGVLMGCSTFGQIAGLLTRGISLFSTRCSGEATPHQYRSIPPLAIAEKGHLWVPIEGSWHDPVLTSRSIFSAALDTLLVAKS 206          
BLAST of mRNA_H-paniculata_contig3220.8672.1 vs. uniprot
Match: A0A6H5L814_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L814_9PHAE)

HSP 1 Score: 210 bits (535), Expect = 3.780e-61
Identity = 113/238 (47.48%), Postives = 145/238 (60.92%), Query Frame = 0
Query:  287 YGMIPECAFDPERLNFGIHVRLGDRVKANPDRHNEYFNKLKAFMDTVTKIVVEKGWDAPLFHVFSETLEPCPHPATGYFDEFPIWPVEMDQIAQ--------CLRAETPEDCLEKRAGLEFCLPNRPGVFHVQEKNIVLHLGDNVKKTMSCMIHADGLLMGCSTFGQVAGVLSKG-LKFFSMACFGTQTPPQYKTIPPFAVSEGGDMWVPVKGSWHDPALWSEVIFKKELNKLLLTKS 515
            Y   P C ++  +LNF +HVR+GDR +       EYF+ L+ FM TVT+ VVE+   AP+FHVFSE L PCP P    F EFP+WPVE DQ+           L  E    CL + A  +    +R G F V+ + ++LHLG N  + +SCM+HADGLLMGCSTFGQ+AGVL+   + FFS  C G   P Q K IPP AV+E G MWVP+ GSW DP L ++ IF   L+ LL  K+
Sbjct:   14 YNDEPGCGYEESQLNFALHVRMGDRRELEGVTP-EYFSLLEDFMATVTQAVVEREQAAPMFHVFSEALYPCPSPENATFTEFPLWPVERDQVDLNVSLHRLFSLSNEKVSVCL-RNAAEQGAPASRKGTFRVEGRPVLLHLGRNAAEALSCMVHADGLLMGCSTFGQLAGVLNGDRISFFSTECGGHGAPLQSKMIPPLAVAERGRMWVPIAGSWRDPVLRAKHIFSAALDALLKRKA 249          
BLAST of mRNA_H-paniculata_contig3220.8672.1 vs. uniprot
Match: A0A6H5JXM8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXM8_9PHAE)

HSP 1 Score: 178 bits (451), Expect = 1.250e-49
Identity = 85/176 (48.30%), Postives = 114/176 (64.77%), Query Frame = 0
Query:  330 MDTVTKIVVEKGWDAPLFHVFSETLEPCPHPATGYFDEFPIWPVEMDQIAQCLRAETPEDCLEKRAGLEFCLPNRPGVFHVQEKNIVLHLGDNVKKTMSCMIHADGLLMGCSTFGQVAGVLSKGLKFFSMACFGTQTPPQYKTIPPFAVSEGGDMWVPVKGSWHDPALWSEVIFKK 505
            M  + K V   G   PLFH+FSET  PCP    G F EFP W V  D+I +C  A  P+DC EK+AG +FC P+  G+F V  + I+ ++G NV +++  MI AD ++MGCS FGQ+AG+LSKG+K FS  C G  T  Q K  P FA++E G++WVP++GSW DP L +  IF+K
Sbjct:    1 MKVIAKEVHGLGQRTPLFHIFSETELPCPSLEDGVFPEFPEWAVAPDEIRECHSARPPDDCPEKQAGGDFCYPHHTGIFRVPGEPIIFNVGGNVVQSLMSMISADAVVMGCSAFGQLAGILSKGIKLFSTGCEGNMTWEQNKMAPLFAIAELGELWVPLEGSWADPTLTNVGIFRK 176          
BLAST of mRNA_H-paniculata_contig3220.8672.1 vs. uniprot
Match: D7G5J9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5J9_ECTSI)

HSP 1 Score: 115 bits (288), Expect = 2.080e-25
Identity = 67/181 (37.02%), Postives = 96/181 (53.04%), Query Frame = 0
Query:   35 GISPVEACGDFQTTSTLDFESSWDFDDCIAVWNAWAATVPDVLHPRYDVRDRIRETALALRNLGSPCLLDAAKTLDGAGSSAIRTLSNWVLAEEIGCDLVSPTWGRS-VQGTNGT-VLYCHEKTPEANEKIDQSMGVDYFANNSDSREMS-CAVVNWLQFFRFDIVGRETVPVNGSIKFVE 212
            G+ P +AC DF         S W  +DC+ VWN +  TV +  HPR    D   +TA  LR  GSPCL+ +    DGAGS+ IR L+ W+ + E+GCD V+P WG+  V G +GT V+YCH     A         +D      + + M  C +++WL +F+FDI    + PV+  +  VE
Sbjct:   97 GVEPADACADFAPGQYTG--SGWTPEDCLHVWNDFNDTVWEQFHPRMPDADLWIDTAEELRRAGSPCLVGSIPNGDGAGSTTIRHLATWIFSREMGCDWVTPDWGKKFVGGRSGTAVMYCHRAGTAAE--------MDPSKTKEELKAMRRCVIIDWLSYFQFDIPSVPS-PVHEKLMVVE 266          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig3220.8672.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
A0A6H5JW68_9PHAE1.660e-9250.36Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FRT1_ECTSI2.120e-8643.49Long-chain acyl-CoA synthetase n=1 Tax=Ectocarpus ... [more]
D7G5J8_ECTSI1.860e-7655.77Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5L814_9PHAE3.780e-6147.48Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JXM8_9PHAE1.250e-4948.30Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G5J9_ECTSI2.080e-2537.02Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 23..518
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 7..18
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..6
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 19..22
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..22
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..22
score: 0.733
NoneNo IPR availableTMHMMTMhelixcoord: 5..27

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig3220contigH-paniculata_contig3220:1151..8041 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig3220.8672.1mRNA_H-paniculata_contig3220.8672.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig3220 1084..8189 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig3220.8672.1 ID=prot_H-paniculata_contig3220.8672.1|Name=mRNA_H-paniculata_contig3220.8672.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=519bp
MRRCYGTAWLLSAASLVFIVTSSPPIVENSLPNGGISPVEACGDFQTTST
LDFESSWDFDDCIAVWNAWAATVPDVLHPRYDVRDRIRETALALRNLGSP
CLLDAAKTLDGAGSSAIRTLSNWVLAEEIGCDLVSPTWGRSVQGTNGTVL
YCHEKTPEANEKIDQSMGVDYFANNSDSREMSCAVVNWLQFFRFDIVGRE
TVPVNGSIKFVEPREKPADATRGLGGLGSPNRLGDRMWDRLVVSVHQSTG
ARYLLSLGSWDELKRRNVRNVLETFRSNFHQLPRPGYGMIPECAFDPERL
NFGIHVRLGDRVKANPDRHNEYFNKLKAFMDTVTKIVVEKGWDAPLFHVF
SETLEPCPHPATGYFDEFPIWPVEMDQIAQCLRAETPEDCLEKRAGLEFC
LPNRPGVFHVQEKNIVLHLGDNVKKTMSCMIHADGLLMGCSTFGQVAGVL
SKGLKFFSMACFGTQTPPQYKTIPPFAVSEGGDMWVPVKGSWHDPALWSE
VIFKKELNKLLLTKSLAV*
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